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AGM11332.1

Arc-Vir

KC292026__AGM11332.1__HGTV1-2__00002

Identity

Accession:
KC292026 ↗
Protein ID:
AGM11332.1 ↗
Kingdom:
archaea

Quality

70.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Thumleimavirales› Halomagnusviridae› Hagravirus› Halogranum_tailed_virus_1

TaxID: 1273749

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 90-195
PDB
Domain cluster: rep: IMGVR_UViG_2554235497_000003-2554235497-2556172836__D56-158
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bbrM00 1.10.472.170 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.83 68.0 5.43e-01 99.1% 47.2%
1c9bA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.82 68.0 7.07e-01 98.1% 94.8%
7ml0M01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.81 60.0 6.80e-01 88.7% 100.0%
1zp2A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.80 74.0 7.30e-01 100.0% 93.8%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.79 63.0 6.70e-01 97.2% 94.7%
6z4xA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.79 69.0 5.94e-01 100.0% 62.6%
5xs2B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.79 74.0 6.83e-01 100.0% 85.6%
1w98B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.78 69.0 6.73e-01 100.0% 87.7%
1jkwA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.76 70.0 5.81e-01 100.0% 59.7%
2b9rA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.73 67.0 6.02e-01 98.1% 85.0%
2ivxB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.72 66.0 6.41e-01 98.1% 92.2%
3h4cA02 1.10.472.110 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.69 63.0 6.23e-01 100.0% 96.4%
2px0A01 1.20.120.1380 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar FlhF biosynthesis protein, N domain 0.69 46.0 5.39e-01 71.7% 100.0%
3nz4B03 1.10.274.20 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 0.66 51.0 5.13e-01 82.1% 86.5%
3deeA01 1.10.150.690 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 0.63 46.0 5.01e-01 82.1% 94.2%
3mc1A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.61 33.0 3.98e-01 79.2% 82.1%
2mx8A01 1.10.274.70 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain 0.60 50.0 4.95e-01 93.4% 99.1%
6hj2A00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.59 51.0 3.89e-01 100.0% 81.0%
2hjmA01 1.20.120.460 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like 0.58 41.0 4.47e-01 74.5% 96.5%
3lqhA02 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.58 46.0 4.67e-01 87.7% 93.4%
1at9A00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.56 45.0 3.56e-01 86.8% 83.5%
2hpsA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.56 47.0 3.99e-01 93.4% 75.5%
2iw3A02 1.20.1390.20 Mainly Alpha › Up-down Bundle › PWI domain › 0.56 39.0 4.17e-01 83.0% 85.6%
1gxyA00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.55 44.0 3.57e-01 89.6% 70.9%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.55 37.0 4.08e-01 79.2% 92.4%
4a64A02 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.54 46.0 4.48e-01 92.5% 90.6%
7qi3A01 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.54 43.0 3.12e-01 87.7% 82.6%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.54 31.0 3.56e-01 83.0% 78.7%
1kxpD03 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.53 39.0 4.23e-01 88.7% 94.3%
3fbzA01 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 38.0 3.93e-01 76.4% 91.2%
1tjoB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.50 37.0 3.22e-01 78.3% 70.3%
7xk2R01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.50 42.0 3.20e-01 93.4% 61.1%
1o9nA00 3.90.1300.10 Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain 0.50 42.0 2.88e-01 94.3% 45.6%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3890040 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.85 71.0 6.42e-01 100.0% 67.1%
5067099 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.82 75.0 6.85e-01 100.0% 75.6%
3378773 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.81 65.0 6.75e-01 97.2% 90.0%
4024734 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.80 72.0 6.13e-01 97.2% 72.7%
1276701 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.80 74.0 6.87e-01 100.0% 80.8%
3392725 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.80 70.0 6.44e-01 100.0% 74.1%
5073389 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.79 71.0 6.44e-01 100.0% 72.9%
3737247 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.79 73.0 5.64e-01 100.0% 47.7%
3493738 101.1.10.17 ↗ alpha arrays › HTH › HTH › Cyclin-like › CycT2-like_C 0.77 65.0 6.25e-01 97.2% 79.2%
3227203 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.77 67.0 5.88e-01 100.0% 65.3%
3239605 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.77 67.0 6.15e-01 93.4% 91.1%
4999090 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.76 65.0 6.08e-01 97.2% 74.6%
4452148 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.76 71.0 5.82e-01 100.0% 58.3%
5078898 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.76 70.0 6.91e-01 100.0% 95.5%
3765551 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.76 70.0 6.11e-01 100.0% 69.0%
3553614 101.1.10.34 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N+CycT2-like_C 0.75 70.0 4.98e-01 100.0% 40.0%
3646228 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.75 69.0 5.92e-01 100.0% 65.6%
4259036 101.1.10.7 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C 0.74 66.0 6.29e-01 95.3% 94.3%
3727859 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.74 69.0 5.04e-01 100.0% 40.0%
3931209 101.1.10.17 ↗ alpha arrays › HTH › HTH › Cyclin-like › CycT2-like_C 0.74 67.0 6.53e-01 98.1% 93.0%
3454921 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.74 68.0 5.39e-01 100.0% 56.6%
3549313 101.1.10.17 ↗ alpha arrays › HTH › HTH › Cyclin-like › CycT2-like_C 0.73 66.0 6.09e-01 98.1% 77.8%
3497513 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.73 65.0 6.47e-01 96.2% 96.4%
3924925 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.71 65.0 6.32e-01 97.2% 89.6%
1596520 4953.1.1.0 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.66 48.0 5.00e-01 82.1% 81.6%
3660611 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.65 57.0 5.31e-01 97.2% 80.7%
5062719 180.1.1.1 ↗ alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 0.63 53.0 4.78e-01 92.5% 88.3%
3326717 180.1.1.7 ↗ alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2_C 0.60 50.0 4.54e-01 91.5% 80.0%
5080632 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.60 46.0 4.67e-01 83.0% 88.6%
3870411 633.1.1.0 ↗ alpha bundles › Bromodomain-like › Bromodomain › Bromodomain 0.60 51.0 4.75e-01 96.2% 87.9%
5030144 3352.1.1.8 ↗ alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PTPS_related 0.59 52.0 3.71e-01 100.0% 86.9%
3280233 180.1.1.5 ↗ alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2_3 0.59 48.0 4.04e-01 91.5% 76.4%
3534305 237.1.1.2 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART 0.59 49.0 3.84e-01 91.5% 72.1%
3597619 633.15.1.0 ↗ alpha bundles › Bromodomain-like › alpha-ketoacid dehydrogenase kinase-N › alpha-ketoacid dehydrogenase kinase-N 0.51 39.0 3.32e-01 83.0% 80.5%
4930318 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.50 43.0 4.08e-01 95.3% 95.4%