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AGM11341.1
Arc-VirKC292026__AGM11341.1__HGTV1-11__00011
Identity
- Accession:
- KC292026 ↗
- Protein ID:
- AGM11341.1 ↗
- Kingdom:
- archaea
Quality
71.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Thumleimavirales›
Halomagnusviridae›
Hagravirus›
Halogranum_tailed_virus_1
TaxID: 1273749
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 31-182
Domain cluster:
rep: OL597546.1__UUB23297.1__X__00001__D24-147
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04586.23 best | Peptidase_S78 | 21.5 | 3.10e-04 | 79.6% | 61.8% |
D2
high
residues 192-246
Domain cluster:
rep: KC292026__AGM11341.1__HGTV1-11__00011__D381-433
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 64.0 | 6.69e-01 | 89.1% | 92.0% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 64.0 | 6.67e-01 | 90.9% | 92.2% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 66.0 | 6.03e-01 | 94.5% | 69.0% |
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 63.0 | 6.03e-01 | 89.1% | 79.4% |
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 62.0 | 6.49e-01 | 89.1% | 96.1% |
| 2e6zA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 61.0 | 5.97e-01 | 89.1% | 81.4% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.74 | 69.0 | 5.37e-01 | 100.0% | 58.7% |
| 1vwxT01 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.73 | 60.0 | 4.85e-01 | 87.3% | 62.9% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 54.0 | 5.62e-01 | 92.7% | 88.0% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 60.0 | 5.47e-01 | 90.9% | 81.9% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 55.0 | 5.93e-01 | 83.6% | 100.0% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 59.0 | 5.77e-01 | 92.7% | 98.3% |
| 2jngA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 61.0 | 5.42e-01 | 96.4% | 71.4% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 57.0 | 4.43e-01 | 90.9% | 48.7% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 56.0 | 4.90e-01 | 90.9% | 70.2% |
| 3k67A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.68 | 50.0 | 3.65e-01 | 80.0% | 76.9% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 55.0 | 5.15e-01 | 90.9% | 89.6% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.67 | 54.0 | 3.72e-01 | 90.9% | 30.4% |
| 4c0fC00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.66 | 53.0 | 4.28e-01 | 90.9% | 51.8% |
| 2fujA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.66 | 47.0 | 3.77e-01 | 78.2% | 93.2% |
| 4by6B00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.65 | 49.0 | 3.58e-01 | 85.5% | 33.7% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.65 | 54.0 | 5.08e-01 | 92.7% | 83.6% |
| 3pe0A03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 54.0 | 5.21e-01 | 92.7% | 81.2% |
| 2rm4A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 52.0 | 4.91e-01 | 90.9% | 89.4% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.63 | 50.0 | 5.20e-01 | 89.1% | 100.0% |
| 2hboA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.62 | 46.0 | 3.50e-01 | 80.0% | 75.2% |
| 2rsxA00 | 3.10.450.420 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 44.0 | 3.27e-01 | 83.6% | 89.9% |
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.58 | 39.0 | 3.53e-01 | 70.9% | 51.2% |
| 3rd7A00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.58 | 43.0 | 2.77e-01 | 80.0% | 38.9% |
| 1pzdA01 | 2.60.40.1480 | Mainly Beta › Sandwich › Immunoglobulin-like › Coatomer, gamma subunit, appendage domain | 0.58 | 39.0 | 2.94e-01 | 70.9% | 64.1% |
| 3u0aA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.58 | 42.0 | 2.80e-01 | 80.0% | 41.4% |
| 1c8uA02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 40.0 | 3.26e-01 | 74.5% | 79.1% |
| 4hz9B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 42.0 | 3.33e-01 | 81.8% | 88.6% |
| 2x0qA01 | 3.30.310.280 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.56 | 41.0 | 3.13e-01 | 78.2% | 36.1% |
| 3rqbA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.56 | 40.0 | 2.66e-01 | 80.0% | 39.0% |
| 4wfvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 45.0 | 3.47e-01 | 100.0% | 88.9% |
| 4ikcA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.55 | 41.0 | 2.65e-01 | 81.8% | 28.5% |
| 5n1tA03 | 3.90.760.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C Sulfide Dehydrogenase; Chain A Domain 3 › Flavocytochrome c sulphide dehydrogenase, flavin-binding domain | 0.55 | 39.0 | 3.69e-01 | 78.2% | 84.5% |
| 3h6qA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 42.0 | 3.09e-01 | 89.1% | 84.5% |
| 3ci0K01 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.55 | 37.0 | 3.12e-01 | 72.7% | 76.0% |
| 4o8sA01 | 3.10.450.620 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain | 0.55 | 37.0 | 2.94e-01 | 72.7% | 39.2% |
| 2ra6C00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 43.0 | 3.42e-01 | 100.0% | 95.8% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.54 | 39.0 | 3.38e-01 | 81.8% | 52.5% |
| 2kt9A01 | 3.30.390.140 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.54 | 39.0 | 3.35e-01 | 81.8% | 96.0% |
| 2moqA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 42.0 | 3.20e-01 | 89.1% | 73.6% |
| 3uh8A00 | 2.60.40.3350 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 37.0 | 2.99e-01 | 74.5% | 74.6% |
| 2a22B00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.53 | 37.0 | 2.65e-01 | 78.2% | 92.6% |
| 1shyB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 39.0 | 2.41e-01 | 87.3% | 34.9% |
| 3mjgB00 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.53 | 37.0 | 3.16e-01 | 76.4% | 67.3% |
| 1vqqA01 | 3.10.450.100 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 | 0.52 | 39.0 | 3.22e-01 | 83.6% | 90.8% |
| 3nv0B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 38.0 | 3.01e-01 | 83.6% | 77.2% |
| 3ecrB03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.52 | 39.0 | 3.30e-01 | 85.5% | 74.5% |
| 3tfzB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 42.0 | 3.05e-01 | 94.5% | 74.5% |
| 3hk4A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 37.0 | 3.04e-01 | 83.6% | 85.6% |
| 3butA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 34.0 | 2.70e-01 | 70.9% | 84.8% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 40.0 | 3.44e-01 | 90.9% | 74.5% |
| 1z5hA03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 37.0 | 3.43e-01 | 81.8% | 89.0% |
| 2ia7A00 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 37.0 | 3.02e-01 | 80.0% | 54.1% |
ECOD (77)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3740753 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.84 | 67.0 | 6.27e-01 | 89.1% | 70.8% |
| 4200330 | 4.1.1.249 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 | 0.82 | 69.0 | 5.13e-01 | 94.5% | 39.2% |
| 3302817 | 4.1.1.362 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 | 0.81 | 68.0 | 5.29e-01 | 94.5% | 45.0% |
| 4961138 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.81 | 67.0 | 6.06e-01 | 90.9% | 73.3% |
| 3169607 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.81 | 68.0 | 6.02e-01 | 94.5% | 65.3% |
| 3721794 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 71.0 | 6.93e-01 | 100.0% | 86.7% |
| 4976896 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.79 | 67.0 | 5.54e-01 | 92.7% | 57.9% |
| 3964889 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.79 | 67.0 | 6.00e-01 | 92.7% | 73.3% |
| 3827886 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.79 | 69.0 | 6.11e-01 | 98.2% | 88.7% |
| 3808601 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 70.0 | 5.90e-01 | 94.5% | 91.8% |
| 5040416 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 59.0 | 6.09e-01 | 90.9% | 88.0% |
| 4881976 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.78 | 64.0 | 5.77e-01 | 94.5% | 66.2% |
| 3229184 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 66.0 | 5.63e-01 | 92.7% | 92.9% |
| 5055961 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.77 | 67.0 | 5.88e-01 | 96.4% | 73.8% |
| 5029643 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.76 | 65.0 | 5.68e-01 | 92.7% | 68.8% |
| 3482559 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 64.0 | 4.52e-01 | 94.5% | 32.4% |
| 4398865 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.75 | 60.0 | 4.98e-01 | 87.3% | 84.2% |
| 3287628 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 61.0 | 5.82e-01 | 89.1% | 93.8% |
| 4632710 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 57.0 | 6.25e-01 | 89.1% | 100.0% |
| 3826751 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.74 | 65.0 | 5.69e-01 | 94.5% | 77.5% |
| 3923813 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 62.0 | 5.81e-01 | 89.1% | 87.7% |
| 3323530 | 4.1.1.118 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_15 | 0.74 | 65.0 | 6.18e-01 | 96.4% | 92.3% |
| 3214653 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 67.0 | 5.52e-01 | 100.0% | 85.3% |
| 3498280 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 68.0 | 5.03e-01 | 100.0% | 61.5% |
| 3229356 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 66.0 | 5.27e-01 | 98.2% | 87.6% |
| 3789647 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 65.0 | 4.61e-01 | 96.4% | 43.9% |
| 3244430 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.73 | 67.0 | 5.30e-01 | 100.0% | 54.3% |
| 1793524 | 4.1.1.14 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e | 0.73 | 61.0 | 4.97e-01 | 90.9% | 63.6% |
| 3834563 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.72 | 63.0 | 5.49e-01 | 94.5% | 78.8% |
| 3185321 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.72 | 64.0 | 5.71e-01 | 96.4% | 88.0% |
| 4022025 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.72 | 63.0 | 4.60e-01 | 96.4% | 45.5% |
| 3658643 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.72 | 63.0 | 4.60e-01 | 96.4% | 41.4% |
| 5017214 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 57.0 | 5.70e-01 | 92.7% | 85.5% |
| 2725406 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.72 | 64.0 | 5.61e-01 | 100.0% | 81.7% |
| 3706000 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.72 | 59.0 | 5.38e-01 | 92.7% | 92.0% |
| 3373583 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.72 | 62.0 | 5.73e-01 | 94.5% | 88.6% |
| 3669494 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.72 | 62.0 | 4.45e-01 | 94.5% | 42.0% |
| 3230400 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 60.0 | 5.68e-01 | 92.7% | 98.5% |
| 3888254 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 53.0 | 5.75e-01 | 83.6% | 97.8% |
| 3319789 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.71 | 60.0 | 5.21e-01 | 94.5% | 75.3% |
| 3482646 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 63.0 | 4.24e-01 | 100.0% | 33.0% |
| 3934655 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 58.0 | 4.95e-01 | 89.1% | 98.8% |
| 5013094 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.68 | 54.0 | 3.97e-01 | 92.7% | 86.1% |
| 3968297 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.67 | 54.0 | 4.00e-01 | 90.9% | 92.7% |
| 3749631 | 4.1.1.14 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e | 0.67 | 55.0 | 4.45e-01 | 90.9% | 47.6% |
| 1108449 | 4.1.1.41 ↗ | beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C | 0.67 | 54.0 | 3.72e-01 | 90.9% | 30.4% |
| 1108456 | 4.1.1.41 ↗ | beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C | 0.66 | 53.0 | 4.33e-01 | 90.9% | 53.7% |
| 3586434 | 4.1.1.41 ↗ | beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C | 0.66 | 53.0 | 3.87e-01 | 90.9% | 36.3% |
| 4020511 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 51.0 | 3.87e-01 | 87.3% | 40.0% |
| 3744711 | 4.1.1.41 ↗ | beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C | 0.65 | 50.0 | 3.62e-01 | 89.1% | 32.9% |
| 3217770 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 57.0 | 4.65e-01 | 100.0% | 66.0% |
| 1815428 | 3454.1.1.1 ↗ | beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like › PilP | 0.64 | 44.0 | 3.67e-01 | 80.0% | 42.1% |
| 3288884 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 48.0 | 3.93e-01 | 83.6% | 50.5% |
| 3255612 | 5.1.4.61 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PAN2_N | 0.62 | 45.0 | 2.85e-01 | 81.8% | 21.4% |
| 5044371 | 3414.1.1.13 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 | 0.62 | 46.0 | 3.56e-01 | 80.0% | 48.8% |
| 5030187 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.61 | 41.0 | 3.76e-01 | 72.7% | 83.3% |
| 4085451 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.61 | 45.0 | 3.70e-01 | 83.6% | 49.1% |
| 4954981 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.60 | 41.0 | 2.91e-01 | 70.9% | 65.3% |
| 3954938 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 46.0 | 4.44e-01 | 92.7% | 89.2% |
| 3198094 | 295.1.1.1 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 | 0.59 | 39.0 | 3.54e-01 | 70.9% | 51.2% |
| 3781936 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.58 | 41.0 | 3.34e-01 | 78.2% | 87.8% |
| 4940436 | 3414.1.1.0 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein | 0.57 | 42.0 | 3.61e-01 | 80.0% | 56.7% |
| 3946465 | 5.1.4.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WG_beta_rep | 0.56 | 44.0 | 2.63e-01 | 85.5% | 14.5% |
| 3436743 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.56 | 42.0 | 2.74e-01 | 87.3% | 20.0% |
| 3472467 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.56 | 40.0 | 3.66e-01 | 76.4% | 90.7% |
| 4959998 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 44.0 | 3.73e-01 | 94.5% | 89.5% |
| 5036807 | 3111.1.1.0 ↗ | beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain | 0.55 | 38.0 | 3.25e-01 | 74.5% | 42.1% |
| 3246852 | 3195.1.1.1 ↗ | extended segments › Mediator of RNA polymerase II transcription subunit 6 › Mediator of RNA polymerase II transcription subunit 6 › Mediator of RNA polymerase II transcription subunit 6 › Med6 | 0.55 | 41.0 | 3.12e-01 | 83.6% | 54.5% |
| 4108476 | 2484.1.1.10 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TsaD | 0.55 | 42.0 | 3.52e-01 | 89.1% | 82.7% |
| 3645476 | 295.1.1.1 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 | 0.55 | 40.0 | 3.43e-01 | 81.8% | 83.0% |
| 3659467 | 243.1.1.45 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › S6PP_C | 0.55 | 39.0 | 3.14e-01 | 80.0% | 88.8% |
| 3327101 | 295.1.1.1 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 | 0.55 | 39.0 | 3.51e-01 | 78.2% | 66.3% |
| 3233362 | 243.3.1.35 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 | 0.54 | 40.0 | 3.13e-01 | 83.6% | 60.7% |
| 3587091 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 41.0 | 3.34e-01 | 89.1% | 75.0% |
| 1229008 | 206.1.1.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 | 0.53 | 39.0 | 3.45e-01 | 80.0% | 73.8% |
| 4062537 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.53 | 41.0 | 3.25e-01 | 100.0% | 89.7% |
| 4034394 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 41.0 | 3.37e-01 | 90.9% | 62.7% |
D3
high
residues 381-433
Domain cluster:
representative
CATH (55)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.86 | 69.0 | 7.08e-01 | 100.0% | 90.0% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.84 | 73.0 | 6.88e-01 | 100.0% | 79.0% |
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 69.0 | 6.46e-01 | 100.0% | 77.8% |
| 1i1jB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.80 | 71.0 | 5.68e-01 | 100.0% | 62.5% |
| 2d9tA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 65.0 | 6.76e-01 | 100.0% | 98.0% |
| 2jngA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 67.0 | 5.87e-01 | 100.0% | 64.9% |
| 1igqB00 | 2.30.30.150 | Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain | 0.78 | 60.0 | 5.88e-01 | 100.0% | 77.2% |
| 4a4kA02 | 2.30.30.1160 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 69.0 | 5.03e-01 | 100.0% | 60.2% |
| 2haxA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 48.0 | 5.22e-01 | 83.0% | 81.4% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 61.0 | 6.13e-01 | 100.0% | 96.2% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 52.0 | 5.44e-01 | 100.0% | 89.6% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 57.0 | 4.66e-01 | 100.0% | 51.0% |
| 2fb7A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 57.0 | 5.11e-01 | 100.0% | 85.0% |
| 2qcpX01 | 2.40.50.320 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF | 0.65 | 53.0 | 4.69e-01 | 88.7% | 94.7% |
| 4by6B00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.65 | 54.0 | 3.91e-01 | 98.1% | 33.7% |
| 2l3rA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 56.0 | 5.06e-01 | 100.0% | 80.8% |
| 1ljoA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 53.0 | 4.86e-01 | 100.0% | 72.0% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 55.0 | 4.82e-01 | 100.0% | 63.9% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.64 | 54.0 | 3.74e-01 | 100.0% | 29.3% |
| 2rm4A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 54.0 | 5.08e-01 | 100.0% | 80.3% |
| 4c0fC00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.64 | 53.0 | 4.29e-01 | 100.0% | 50.0% |
| 4rljB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.63 | 51.0 | 3.80e-01 | 92.5% | 88.4% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 54.0 | 4.98e-01 | 100.0% | 86.8% |
| 1z6bA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.61 | 49.0 | 3.66e-01 | 92.5% | 77.5% |
| 2x45A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 52.0 | 3.83e-01 | 100.0% | 52.1% |
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.60 | 40.0 | 3.59e-01 | 71.7% | 52.5% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 48.0 | 4.50e-01 | 100.0% | 72.6% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 44.0 | 3.60e-01 | 88.7% | 86.4% |
| 3f40A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 46.0 | 3.73e-01 | 94.3% | 81.1% |
| 3k8aB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 44.0 | 3.65e-01 | 88.7% | 89.3% |
| 1cboA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 44.0 | 2.84e-01 | 96.2% | 63.6% |
| 3u2gA02 | 2.60.98.40 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain | 0.57 | 46.0 | 3.59e-01 | 96.2% | 67.4% |
| 3ckiB00 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 38.0 | 3.00e-01 | 73.6% | 71.1% |
| 3gniB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 42.0 | 3.63e-01 | 84.9% | 88.8% |
| 4oddA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 47.0 | 3.47e-01 | 100.0% | 66.4% |
| 1e5pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 47.0 | 3.46e-01 | 100.0% | 66.4% |
| 2kt9A01 | 3.30.390.140 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.55 | 40.0 | 3.39e-01 | 83.0% | 93.9% |
| 1c8uA02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 43.0 | 3.44e-01 | 90.6% | 80.0% |
| 2f3xA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 43.0 | 3.28e-01 | 92.5% | 70.6% |
| 2ejwA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 41.0 | 3.03e-01 | 86.8% | 83.2% |
| 2ra6C00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 43.0 | 3.33e-01 | 100.0% | 74.8% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 42.0 | 3.93e-01 | 98.1% | 78.7% |
| 4wfvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 42.0 | 3.23e-01 | 100.0% | 86.3% |
| 2lfuA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 39.0 | 3.14e-01 | 88.7% | 37.2% |
| 2vn8A01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.52 | 42.0 | 3.11e-01 | 100.0% | 66.9% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 41.0 | 3.43e-01 | 96.2% | 64.2% |
| 4qunA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 37.0 | 2.49e-01 | 84.9% | 43.5% |
| 6j5cA02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.51 | 45.0 | 3.90e-01 | 100.0% | 66.3% |
| 3mjgB00 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.51 | 39.0 | 3.33e-01 | 88.7% | 67.3% |
| 5c98B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.51 | 43.0 | 3.31e-01 | 96.2% | 69.0% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.51 | 39.0 | 3.97e-01 | 90.6% | 92.2% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 42.0 | 3.54e-01 | 98.1% | 66.0% |
| 2k54A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 38.0 | 3.16e-01 | 94.3% | 81.3% |
| 4ikcA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 37.0 | 2.48e-01 | 84.9% | 42.7% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 39.0 | 3.30e-01 | 96.2% | 83.0% |
ECOD (87)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3885050 | 4.1.1.360 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 | 0.87 | 73.0 | 4.88e-01 | 100.0% | 26.9% |
| 3222146 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.87 | 73.0 | 6.72e-01 | 100.0% | 72.3% |
| 3756428 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.87 | 73.0 | 5.73e-01 | 100.0% | 47.0% |
| 3555930 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.87 | 73.0 | 6.52e-01 | 100.0% | 67.1% |
| 4547820 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.87 | 73.0 | 5.61e-01 | 100.0% | 44.8% |
| 3237859 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.87 | 72.0 | 7.16e-01 | 100.0% | 85.5% |
| 3519126 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.86 | 72.0 | 6.12e-01 | 100.0% | 58.7% |
| 3619215 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 71.0 | 5.59e-01 | 100.0% | 47.0% |
| 4984882 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.85 | 74.0 | 6.63e-01 | 100.0% | 70.0% |
| 3866038 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.85 | 69.0 | 5.78e-01 | 100.0% | 54.1% |
| 3678872 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.84 | 77.0 | 6.76e-01 | 100.0% | 86.7% |
| 3339162 | 4.1.1.330 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O | 0.84 | 76.0 | 5.61e-01 | 100.0% | 47.7% |
| 3664869 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.84 | 75.0 | 4.86e-01 | 100.0% | 34.5% |
| 3820065 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 69.0 | 6.82e-01 | 100.0% | 85.5% |
| 3819340 | 4.1.1.322 ↗ | beta barrels › SH3 › SH3 › SH3 › GPKOW_C | 0.84 | 69.0 | 5.15e-01 | 100.0% | 39.2% |
| 3440094 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.83 | 72.0 | 6.89e-01 | 100.0% | 81.7% |
| 3683850 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.83 | 74.0 | 5.79e-01 | 100.0% | 70.0% |
| 3924213 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.83 | 68.0 | 5.45e-01 | 100.0% | 48.4% |
| 3805095 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.83 | 75.0 | 6.22e-01 | 100.0% | 76.7% |
| 4015427 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 68.0 | 4.40e-01 | 100.0% | 21.9% |
| 4027263 | 4.1.1.104 ↗ | beta barrels › SH3 › SH3 › SH3 › KN17_SH3 | 0.83 | 74.0 | 5.58e-01 | 100.0% | 43.3% |
| 3190835 | 4.1.1.286 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7072 | 0.82 | 68.0 | 5.70e-01 | 100.0% | 55.3% |
| 3668787 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.82 | 73.0 | 5.88e-01 | 100.0% | 74.0% |
| 4470603 | 4.1.1.217 ↗ | beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 | 0.82 | 67.0 | 4.62e-01 | 100.0% | 28.5% |
| 3516048 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 65.0 | 5.22e-01 | 100.0% | 46.0% |
| 3259547 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 65.0 | 4.98e-01 | 100.0% | 40.0% |
| 3598283 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 73.0 | 5.27e-01 | 100.0% | 39.2% |
| 3429053 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.80 | 66.0 | 4.50e-01 | 100.0% | 27.0% |
| 3703932 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 71.0 | 6.77e-01 | 100.0% | 85.0% |
| 3827886 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.79 | 69.0 | 6.07e-01 | 100.0% | 82.5% |
| 3229184 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 72.0 | 6.01e-01 | 100.0% | 89.4% |
| 3706000 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.77 | 68.0 | 6.10e-01 | 100.0% | 89.3% |
| 3287628 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 71.0 | 6.59e-01 | 100.0% | 92.2% |
| 3787586 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.77 | 64.0 | 5.03e-01 | 100.0% | 45.7% |
| 3251940 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.76 | 66.0 | 5.82e-01 | 100.0% | 66.7% |
| 3684460 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.76 | 68.0 | 5.60e-01 | 100.0% | 84.2% |
| 3595283 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 66.0 | 4.99e-01 | 100.0% | 43.5% |
| 3319789 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.74 | 68.0 | 5.71e-01 | 100.0% | 70.6% |
| 5029166 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 68.0 | 6.03e-01 | 100.0% | 87.8% |
| 3819397 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.72 | 65.0 | 5.63e-01 | 100.0% | 68.8% |
| 4976896 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.72 | 65.0 | 5.28e-01 | 100.0% | 55.8% |
| 3712451 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 63.0 | 4.73e-01 | 100.0% | 41.6% |
| 3477037 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.71 | 64.0 | 5.85e-01 | 100.0% | 87.1% |
| 3669494 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.71 | 65.0 | 4.61e-01 | 100.0% | 39.3% |
| 3394559 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 64.0 | 5.05e-01 | 100.0% | 76.2% |
| 3328647 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.70 | 63.0 | 5.33e-01 | 100.0% | 62.4% |
| 3214653 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 63.0 | 5.15e-01 | 100.0% | 55.8% |
| 3394789 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 60.0 | 4.81e-01 | 100.0% | 52.7% |
| 3180573 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 61.0 | 5.03e-01 | 100.0% | 71.6% |
| 3625817 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.69 | 61.0 | 5.31e-01 | 100.0% | 66.3% |
| 3272363 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.68 | 60.0 | 4.94e-01 | 100.0% | 60.0% |
| 3918299 | 4.1.1.376 ↗ | beta barrels › SH3 › SH3 › SH3 › Chromo_MORC2_6th | 0.67 | 61.0 | 5.53e-01 | 100.0% | 77.1% |
| 3593222 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 54.0 | 4.77e-01 | 100.0% | 59.8% |
| 5013094 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.66 | 55.0 | 4.03e-01 | 100.0% | 84.8% |
| 3968297 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.66 | 56.0 | 4.12e-01 | 100.0% | 92.0% |
| 3954938 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 57.0 | 5.38e-01 | 100.0% | 81.5% |
| 5042177 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.65 | 55.0 | 4.92e-01 | 100.0% | 71.2% |
| 5026934 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.65 | 54.0 | 4.86e-01 | 100.0% | 66.3% |
| 4932286 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.65 | 53.0 | 4.95e-01 | 100.0% | 74.0% |
| 3586434 | 4.1.1.41 ↗ | beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C | 0.64 | 54.0 | 3.94e-01 | 100.0% | 35.0% |
| 3285471 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.64 | 53.0 | 3.89e-01 | 92.5% | 91.7% |
| 4020511 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 54.0 | 4.04e-01 | 100.0% | 40.0% |
| 3278081 | 2.4.1.15 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2, CysA_C_terminal | 0.63 | 54.0 | 4.11e-01 | 94.3% | 46.7% |
| 5030187 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.63 | 48.0 | 4.24e-01 | 83.0% | 85.9% |
| 3725169 | 4.1.1.41 ↗ | beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C | 0.62 | 52.0 | 3.73e-01 | 100.0% | 33.7% |
| 3173378 | 109.4.1.338 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIC1 | 0.62 | 46.0 | 2.94e-01 | 92.5% | 17.1% |
| 4948069 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 49.0 | 4.54e-01 | 100.0% | 72.0% |
| 3597696 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.60 | 46.0 | 4.58e-01 | 83.0% | 89.1% |
| 4966293 | 234.3.1.0 ↗ | a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain | 0.57 | 47.0 | 3.99e-01 | 100.0% | 57.0% |
| 3603448 | 3291.1.1.49 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › NFACT_N | 0.57 | 48.0 | 3.38e-01 | 90.6% | 47.3% |
| 5013054 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.57 | 44.0 | 2.91e-01 | 94.3% | 18.8% |
| 3587091 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 41.0 | 3.35e-01 | 84.9% | 68.3% |
| 4282587 | 3195.1.1.1 ↗ | extended segments › Mediator of RNA polymerase II transcription subunit 6 › Mediator of RNA polymerase II transcription subunit 6 › Mediator of RNA polymerase II transcription subunit 6 › Med6 | 0.56 | 42.0 | 3.19e-01 | 81.1% | 53.6% |
| 4025080 | 220.1.1.198 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_FAN | 0.56 | 45.0 | 3.22e-01 | 96.2% | 36.8% |
| 3702818 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 45.0 | 2.91e-01 | 100.0% | 59.7% |
| 3787765 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 42.0 | 3.32e-01 | 86.8% | 98.4% |
| 4029094 | 3257.1.1.0 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain | 0.55 | 46.0 | 3.22e-01 | 100.0% | 29.0% |
| 3961894 | 2.4.1.3 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK | 0.55 | 43.0 | 3.50e-01 | 94.3% | 45.0% |
| 4108476 | 2484.1.1.10 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TsaD | 0.54 | 42.0 | 3.52e-01 | 94.3% | 70.9% |
| 1155745 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.54 | 46.0 | 3.38e-01 | 100.0% | 62.3% |
| 1684916 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.53 | 42.0 | 3.23e-01 | 100.0% | 86.3% |
| 4961746 | 304.8.1.122 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DmsR_N | 0.52 | 43.0 | 3.43e-01 | 96.2% | 59.1% |
| 4034394 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 42.0 | 3.40e-01 | 94.3% | 60.0% |
| 4085451 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.52 | 39.0 | 3.33e-01 | 94.3% | 48.2% |
| 3477516 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.52 | 42.0 | 2.78e-01 | 100.0% | 35.2% |
| 3737743 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.52 | 38.0 | 3.24e-01 | 88.7% | 45.0% |
| 1294396 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.51 | 41.0 | 3.15e-01 | 100.0% | 88.2% |
D4
high
residues 456-562
Domain cluster:
rep: KF147891.1__QKE11213.1__PaBG_00148__00148__D7-109
D5
high
residues 565-672
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 33.0 | 4.50e-01 | 91.7% | 78.9% |
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.68 | 39.0 | 5.06e-01 | 97.2% | 100.0% |
| 2oznB01 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.68 | 30.0 | 3.41e-01 | 90.7% | 52.5% |
| 2iexA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.68 | 26.0 | 3.72e-01 | 87.0% | 74.5% |
| 4od8D00 | 6.10.140.1880 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 29.0 | 4.05e-01 | 90.7% | 86.3% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.63 | 28.0 | 3.36e-01 | 88.9% | 60.6% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.62 | 29.0 | 3.65e-01 | 91.7% | 75.4% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 28.0 | 2.87e-01 | 90.7% | 40.6% |
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 35.0 | 4.38e-01 | 98.1% | 97.0% |
| 2qyuA02 | 1.25.40.300 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein | 0.55 | 41.0 | 3.38e-01 | 78.7% | 60.5% |
| 3akjA02 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.54 | 39.0 | 3.25e-01 | 75.9% | 100.0% |
| 2bvlA01 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 40.0 | 4.39e-01 | 95.4% | 96.5% |
| 3cegA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.53 | 43.0 | 3.18e-01 | 88.0% | 96.2% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.52 | 35.0 | 3.86e-01 | 100.0% | 85.1% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 36.0 | 4.12e-01 | 98.1% | 95.1% |
| 2fe1A00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.52 | 35.0 | 3.35e-01 | 91.7% | 58.5% |
| 2m7bA00 | 1.10.10.1920 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.52 | 32.0 | 3.61e-01 | 98.1% | 85.7% |
| 5djsA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 36.0 | 3.32e-01 | 75.9% | 62.9% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3673226 | 622.2.1.0 ↗ | alpha bundles › YvfG-like › YvfG-like › YvfG-like | 0.77 | 37.0 | 5.08e-01 | 99.1% | 90.9% |
| 3577145 | 4030.1.1.0 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz | 0.76 | 38.0 | 5.26e-01 | 100.0% | 96.4% |
| 4027013 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.73 | 35.0 | 5.00e-01 | 100.0% | 94.5% |
| 3482349 | 604.12.1.2 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 | 0.64 | 37.0 | 4.69e-01 | 98.1% | 96.9% |
| 4024559 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.63 | 42.0 | 3.55e-01 | 97.2% | 41.6% |
| 3574981 | 604.12.1.91 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › RSLD_CPSF6 | 0.62 | 37.0 | 4.56e-01 | 100.0% | 92.9% |
| 3695193 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 47.0 | 3.52e-01 | 80.6% | 44.2% |
| 3924801 | 109.4.1.1643 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RSLD_CPSF6 | 0.61 | 36.0 | 3.86e-01 | 100.0% | 67.4% |
| 5004436 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 47.0 | 3.95e-01 | 80.6% | 60.1% |
| 4981071 | 7516.1.1.79 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_trans_2_3 | 0.60 | 46.0 | 3.09e-01 | 80.6% | 47.7% |
| 3229748 | 1134.1.1.9 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › RSLD_CPSF6 | 0.60 | 37.0 | 4.14e-01 | 100.0% | 78.8% |
| 3773905 | 604.3.1.33 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › RSLD_CPSF6 | 0.59 | 37.0 | 4.37e-01 | 100.0% | 90.7% |
| 3889971 | 109.4.1.1643 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RSLD_CPSF6 | 0.59 | 37.0 | 3.70e-01 | 100.0% | 61.8% |
| 3223407 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 45.0 | 4.22e-01 | 82.4% | 83.0% |
| 3698538 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.56 | 39.0 | 3.48e-01 | 70.4% | 93.3% |
| 3997708 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 40.0 | 3.70e-01 | 74.1% | 94.1% |
| 3297166 | 109.4.1.1273 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 | 0.54 | 40.0 | 2.51e-01 | 78.7% | 16.7% |
| 3717826 | 547.1.1.0 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain | 0.54 | 30.0 | 3.08e-01 | 93.5% | 55.2% |
| 4159776 | 3294.1.1.1 ↗ | alpha complex topology › FAS type I helical domain › FAS type I helical domain › FAS type I helical domain › FAS_I_H | 0.50 | 36.0 | 2.80e-01 | 89.8% | 33.6% |