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AGM11497.1
Arc-VirKC292026__AGM11497.1__HGTV1-200__00167
Identity
- Accession:
- KC292026 ↗
- Protein ID:
- AGM11497.1 ↗
- Kingdom:
- archaea
Quality
84.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Thumleimavirales›
Halomagnusviridae›
Hagravirus›
Halogranum_tailed_virus_1
TaxID: 1273749
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-73
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k2dA00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.63 | 38.0 | 4.56e-01 | 76.4% | 93.6% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4525886 | 109.4.1.1360 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CBF, NOC3p | 0.59 | 51.0 | 2.95e-01 | 93.1% | 10.8% |
| 3726081 | 2484.1.1.192 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF8340_N | 0.59 | 46.0 | 3.15e-01 | 83.3% | 51.2% |
| 3176209 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 38.0 | 3.00e-01 | 75.0% | 54.0% |
| 3453111 | 10.12.1.73 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › DIOX_N | 0.53 | 42.0 | 3.19e-01 | 87.5% | 51.7% |
| 3730835 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.52 | 36.0 | 3.31e-01 | 70.8% | 70.5% |
| 3167201 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.51 | 39.0 | 2.75e-01 | 84.7% | 83.1% |