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AGM11518.1
Arc-VirKC292026__AGM11518.1__HGTV1-221__00188
Identity
- Accession:
- KC292026 ↗
- Protein ID:
- AGM11518.1 ↗
- Kingdom:
- archaea
Quality
68.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Thumleimavirales›
Halomagnusviridae›
Hagravirus›
Halogranum_tailed_virus_1
TaxID: 1273749
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-80
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x0tA02 | 6.20.50.20 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.73 | 35.0 | 4.33e-01 | 74.7% | 75.6% |
| 1hczA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.57 | 38.0 | 4.10e-01 | 89.3% | 84.7% |
| 3clqA02 | 3.90.1710.10 | Alpha Beta › Alpha-Beta Complex › Enterococcus faecalis V583 fold › Enterococcus faecalis V583 domain | 0.57 | 49.0 | 3.87e-01 | 96.0% | 97.5% |
| 1fumA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 44.0 | 2.95e-01 | 85.3% | 95.1% |
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 35.0 | 3.72e-01 | 92.0% | 78.1% |
| 3doaA01 | 2.30.310.10 | Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain | 0.52 | 37.0 | 3.00e-01 | 76.0% | 68.6% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 33.0 | 3.61e-01 | 94.7% | 82.0% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3620947 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.60 | 34.0 | 3.93e-01 | 85.3% | 76.4% |
| 3885959 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 39.0 | 2.63e-01 | 76.0% | 95.1% |
| 3367789 | 206.1.1.71 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo | 0.54 | 38.0 | 2.50e-01 | 73.3% | 94.8% |
| None | — | 0.53 | 38.0 | 2.34e-01 | 74.7% | 94.6% | |
| None | — | 0.53 | 39.0 | 2.42e-01 | 78.7% | 73.7% | |
| 3201592 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 36.0 | 2.68e-01 | 72.0% | 46.4% |
| 3694620 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 44.0 | 2.98e-01 | 100.0% | 52.5% |
| None | — | 0.52 | 38.0 | 2.43e-01 | 100.0% | 14.3% | |
| 3920576 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.52 | 36.0 | 2.42e-01 | 73.3% | 91.7% |
| 3253321 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 36.0 | 3.75e-01 | 85.3% | 84.6% |
| 4283499 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 36.0 | 2.41e-01 | 72.0% | 59.0% |
| 3628200 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 36.0 | 2.34e-01 | 73.3% | 85.1% |
| 4590386 | 206.1.1.76 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1, Pkinase_fungal | 0.51 | 35.0 | 2.45e-01 | 73.3% | 97.8% |
| 4011470 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 35.0 | 2.30e-01 | 72.0% | 49.2% |
| 3865404 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 40.0 | 2.64e-01 | 93.3% | 26.2% |
| 3701501 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.50 | 35.0 | 3.71e-01 | 90.7% | 84.6% |