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AGM11524.1
Arc-VirKC292026__AGM11524.1__HGTV1-227__00194
Identity
- Accession:
- KC292026 ↗
- Protein ID:
- AGM11524.1 ↗
- Kingdom:
- archaea
Quality
70.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Thumleimavirales›
Halomagnusviridae›
Hagravirus›
Halogranum_tailed_virus_1
TaxID: 1273749
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-61
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mxqC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 37.0 | 2.95e-01 | 81.0% | 30.4% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3743708 | 101.21.1.1 ↗ | alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit › TP6A_N | 0.60 | 39.0 | 3.05e-01 | 70.7% | 30.4% |
| 3482404 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.59 | 49.0 | 3.38e-01 | 100.0% | 57.1% |
| 3219989 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.56 | 49.0 | 3.05e-01 | 100.0% | 38.6% |
| 3212212 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.56 | 47.0 | 2.99e-01 | 100.0% | 40.3% |
| 4049326 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.55 | 36.0 | 2.48e-01 | 77.6% | 16.2% |
| 3994408 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.55 | 31.0 | 2.20e-01 | 87.9% | 15.0% |
| 3501317 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 38.0 | 3.55e-01 | 77.6% | 98.8% |
| 3939937 | 5052.1.1.1 ↗ | alpha complex topology › Proton glutamate symport protein › Proton glutamate symport protein › Proton glutamate symport protein › SDF | 0.53 | 42.0 | 2.55e-01 | 89.7% | 48.6% |
| 4388950 | 101.1.2.100 ↗ | alpha arrays › HTH › HTH › winged helix domain › FeoC | 0.53 | 36.0 | 3.26e-01 | 74.1% | 50.0% |
| 3179803 | 101.21.1.1 ↗ | alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit › TP6A_N | 0.53 | 34.0 | 2.75e-01 | 79.3% | 29.2% |
| 3337266 | 2004.1.1.212 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Microtub_bd | 0.53 | 36.0 | 2.37e-01 | 74.1% | 59.3% |
| 4581683 | 3747.1.1.2 ↗ | a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bb_rod,Flg_bbr_C | 0.53 | 35.0 | 2.96e-01 | 79.3% | 35.7% |
| 3783531 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.52 | 36.0 | 3.23e-01 | 79.3% | 47.8% |
| 3929060 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.52 | 34.0 | 2.98e-01 | 74.1% | 41.1% |
| 3712062 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 41.0 | 3.43e-01 | 93.1% | 93.0% |
| 3686074 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.52 | 40.0 | 2.57e-01 | 84.5% | 17.5% |
| 3590896 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 34.0 | 2.19e-01 | 75.9% | 11.6% |
| 3467154 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.50 | 35.0 | 2.63e-01 | 87.9% | 25.1% |
| 3520889 | 243.9.1.2 ↗ | a+b two layers › Cystatin-like › Nuclease A inhibitor (NuiA)-related › Nuclease A inhibitor (NuiA)-related › Maf1 | 0.50 | 32.0 | 2.50e-01 | 74.1% | 27.4% |