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AGM11557.1
Arc-VirKC292026__AGM11557.1__HGTV1-260__00227
Identity
- Accession:
- KC292026 ↗
- Protein ID:
- AGM11557.1 ↗
- Kingdom:
- archaea
Quality
79.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Thumleimavirales›
Halomagnusviridae›
Hagravirus›
Halogranum_tailed_virus_1
TaxID: 1273749
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 58-129
Domain cluster:
rep: IMGVR_UViG_3300048114_000341-3300048114-Ga0494428_0000018_19163_19501__D12-87
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p4tA00 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 48.0 | 5.25e-01 | 100.0% | 79.3% |
| 1r6zA03 | 2.170.260.10 | Mainly Beta › Beta Complex › paz domain › paz domain | 0.74 | 67.0 | 5.52e-01 | 100.0% | 60.3% |
| 1u04A02 | 3.90.70.180 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.62 | 55.0 | 4.80e-01 | 100.0% | 79.5% |
| 5yzzC00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.57 | 42.0 | 3.74e-01 | 81.9% | 95.5% |
| 5os9A00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.56 | 42.0 | 3.64e-01 | 80.6% | 96.5% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 40.0 | 4.23e-01 | 100.0% | 85.9% |
| 7rpyA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 38.0 | 3.31e-01 | 76.4% | 75.4% |
| 1dlcA03 | 2.100.10.10 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain | 0.53 | 42.0 | 3.20e-01 | 93.1% | 96.4% |
| 6ovbA03 | 2.100.10.10 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain | 0.52 | 42.0 | 3.26e-01 | 95.8% | 97.3% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3924850 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.79 | 73.0 | 5.97e-01 | 100.0% | 64.0% |
| 4000631 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.78 | 60.0 | 6.33e-01 | 81.9% | 95.4% |
| 3396446 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.78 | 72.0 | 5.86e-01 | 100.0% | 60.8% |
| 3926603 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.76 | 70.0 | 5.81e-01 | 100.0% | 61.7% |
| 3454623 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 48.0 | 5.22e-01 | 80.6% | 93.3% |
| 5079843 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.65 | 44.0 | 4.64e-01 | 100.0% | 78.5% |
| 3585306 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.64 | 45.0 | 4.61e-01 | 87.5% | 77.1% |
| 3341969 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.56 | 48.0 | 4.16e-01 | 97.2% | 98.3% |
| 3866907 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.55 | 43.0 | 4.11e-01 | 100.0% | 71.8% |
| 3770804 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 43.0 | 4.09e-01 | 100.0% | 71.8% |
| 4586356 | 220.1.1.81 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF2550 | 0.53 | 46.0 | 3.74e-01 | 95.8% | 52.6% |
| 3713569 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 48.0 | 3.90e-01 | 100.0% | 54.6% |
| None | — | 0.50 | 42.0 | 3.28e-01 | 97.2% | 88.2% |