←Back to structures
AGM11610.1
Arc-VirKC292026__AGM11610.1__HGTV1-313__00280
Identity
- Accession:
- KC292026 ↗
- Protein ID:
- AGM11610.1 ↗
- Kingdom:
- archaea
Quality
76.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Thumleimavirales›
Halomagnusviridae›
Hagravirus›
Halogranum_tailed_virus_1
TaxID: 1273749
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-144
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hzuS00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.61 | 42.0 | 4.08e-01 | 71.5% | 82.3% |
| 3ubcA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.61 | 42.0 | 4.41e-01 | 70.8% | 100.0% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.60 | 41.0 | 4.13e-01 | 70.8% | 98.0% |
| 7ccmB01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.58 | 41.0 | 4.20e-01 | 91.0% | 74.1% |
| 3lcnB00 | 1.10.340.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain | 0.55 | 31.0 | 3.69e-01 | 93.1% | 81.4% |
| 3gyuA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.54 | 37.0 | 3.16e-01 | 93.8% | 41.7% |
| 1cqxA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 44.0 | 4.35e-01 | 88.9% | 93.3% |
| 4hstB03 | 1.10.1400.10 | Mainly Alpha › Orthogonal Bundle › Penicillin amidase (Acylase) alpha subunit, N-terminal domain › Aminohydrolase, alpha-helical knob region | 0.52 | 37.0 | 3.87e-01 | 71.5% | 91.5% |
| 6o0aA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 44.0 | 4.39e-01 | 91.0% | 96.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3214269 | 188.1.1.1 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep | 0.63 | 37.0 | 2.97e-01 | 72.2% | 29.8% |
| 5037670 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.56 | 39.0 | 3.67e-01 | 70.8% | 76.6% |
| 3741282 | 101.1.1.10 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › ARID | 0.53 | 32.0 | 3.33e-01 | 91.0% | 62.2% |
| 3486395 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.52 | 27.0 | 3.18e-01 | 70.1% | 71.1% |
D2
medium
residues 145-234