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AGM11659.1

Arc-Vir

KC292027__AGM11659.1__HCTV5-49__00049

Identity

Accession:
KC292027 ↗
Protein ID:
AGM11659.1 ↗
Kingdom:
archaea

Quality

83.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-150
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02732.22 best ERCC4 28.8 1.50e-06 93.2% 68.6%
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bgwB01 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.88 75.0 7.93e-01 100.0% 99.2%
4bxoA01 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.84 70.0 7.26e-01 100.0% 94.1%
2ziuB01 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.76 68.0 6.78e-01 100.0% 93.3%
3jteA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 53.0 5.71e-01 100.0% 98.4%
3lufB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 51.0 5.58e-01 99.3% 99.2%
3wtcA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 56.0 4.69e-01 97.9% 93.1%
1zjyA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 56.0 4.71e-01 100.0% 92.4%
3tauA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 47.0 4.88e-01 98.6% 85.7%
3n74A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 55.0 4.78e-01 97.9% 92.5%
5bt9D00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 54.0 4.65e-01 98.6% 89.3%
1e7wB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 55.0 4.55e-01 97.9% 93.4%
5unlB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 55.0 4.54e-01 97.9% 91.6%
1thtA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.61 56.0 4.43e-01 100.0% 77.6%
3t4xA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 56.0 4.58e-01 100.0% 91.3%
3afmB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 55.0 4.71e-01 98.6% 92.3%
3tjrA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 53.0 4.47e-01 95.9% 84.0%
2r0cA03 3.40.30.120 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.61 33.0 3.64e-01 95.9% 64.7%
4gkbA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 54.0 4.62e-01 100.0% 89.9%
4iiuC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 54.0 4.60e-01 97.9% 94.6%
1zmtA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 54.0 4.58e-01 100.0% 90.9%
4e4yA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 53.0 4.53e-01 97.9% 93.4%
5o3zL00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 53.0 4.41e-01 96.6% 93.8%
1cydA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 54.0 4.59e-01 100.0% 93.0%
4zd6C00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 54.0 4.66e-01 98.6% 92.9%
3fcxB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 53.0 4.35e-01 100.0% 85.8%
5if3B00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 48.0 4.34e-01 89.0% 85.6%
4cqmG00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 51.0 4.48e-01 97.3% 92.4%
1ihuA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 49.0 4.17e-01 91.8% 92.7%
3qpbF00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.58 52.0 4.32e-01 97.3% 92.4%
5bmoC00 3.40.50.10320 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like 0.58 43.0 3.60e-01 76.7% 64.9%
3lqkA00 3.40.50.1950 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like 0.57 52.0 4.71e-01 98.6% 93.8%
2ejbA00 3.40.50.1950 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like 0.57 51.0 4.81e-01 98.6% 98.3%
2x5oA03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.57 39.0 4.10e-01 95.2% 77.0%
1qv9A01 3.40.50.10830 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) 0.56 50.0 4.93e-01 100.0% 91.6%
3czpB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 51.0 4.53e-01 100.0% 86.9%
3eywB02 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.56 50.0 4.77e-01 99.3% 98.9%
1flaA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.56 48.0 4.94e-01 95.9% 100.0%
1kicB00 3.90.245.10 Alpha Beta › Alpha-Beta Complex › Inosine-uridine Nucleoside N-ribohydrolase; Chain A › Ribonucleoside hydrolase-like 0.56 48.0 3.73e-01 92.5% 97.1%
8hi4A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 48.0 3.99e-01 93.8% 95.2%
1p3dA03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.55 45.0 4.47e-01 93.2% 85.3%
3f2vA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.54 47.0 4.50e-01 96.6% 100.0%
3d7nA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.54 48.0 4.73e-01 99.3% 100.0%
3u7iA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.54 47.0 4.17e-01 97.3% 97.2%
2dpmA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 43.0 4.29e-01 97.9% 83.2%
1wraA01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.53 47.0 3.79e-01 100.0% 97.7%
3kegA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.53 45.0 4.17e-01 95.2% 100.0%
7rzy101 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 40.0 3.71e-01 78.8% 63.1%
1rliD00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.52 44.0 4.30e-01 96.6% 100.0%
5jioA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.51 46.0 4.12e-01 100.0% 80.9%
1itzA03 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 38.0 4.05e-01 96.6% 89.0%
3simA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 44.0 3.60e-01 94.5% 96.0%
4nl4H03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 41.0 3.78e-01 87.7% 71.9%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5073925 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.87 78.0 7.61e-01 100.0% 87.1%
4987973 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.87 76.0 7.60e-01 100.0% 88.7%
4945737 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.87 76.0 7.45e-01 100.0% 85.8%
4990260 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.86 75.0 7.64e-01 100.0% 94.3%
5032065 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.86 76.0 7.79e-01 99.3% 96.4%
3956943 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.85 75.0 7.50e-01 100.0% 90.0%
3276300 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.84 80.0 7.02e-01 100.0% 74.6%
5008608 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.84 76.0 7.53e-01 99.3% 92.7%
4933501 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.83 78.0 7.90e-01 99.3% 100.0%
4030512 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.83 78.0 6.80e-01 100.0% 78.1%
3273735 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.82 78.0 6.75e-01 99.3% 86.2%
5029078 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.82 75.0 7.49e-01 100.0% 94.0%
3573694 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.82 77.0 6.62e-01 100.0% 75.0%
4385311 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.81 76.0 6.39e-01 100.0% 85.1%
4288654 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.81 72.0 7.30e-01 100.0% 94.5%
5063392 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.81 77.0 7.63e-01 100.0% 99.3%
5077535 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.80 75.0 7.13e-01 100.0% 90.0%
4029048 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.78 73.0 6.93e-01 100.0% 96.5%
3553831 2008.1.1.7 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.76 71.0 6.09e-01 100.0% 80.9%
3736568 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.76 70.0 6.87e-01 100.0% 91.6%
3702525 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.73 68.0 6.70e-01 100.0% 94.2%
3222402 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.71 65.0 5.80e-01 100.0% 80.5%
3249053 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.64 59.0 5.22e-01 100.0% 89.0%
3174663 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.64 57.0 4.70e-01 96.6% 93.1%
None 0.63 58.0 4.47e-01 100.0% 85.0%
3269531 2004.1.1.164 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc 0.62 57.0 4.99e-01 100.0% 99.5%
5009623 2003.1.1.69 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 0.62 56.0 4.62e-01 98.6% 89.6%
4194046 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.62 56.0 5.14e-01 98.6% 93.2%
3471711 2004.1.1.495 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TRAPPC10_1st 0.62 56.0 5.07e-01 100.0% 94.0%
5000141 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.62 56.0 5.02e-01 100.0% 91.2%
4946623 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.62 56.0 5.18e-01 100.0% 95.7%
4012734 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.61 56.0 4.60e-01 100.0% 86.2%
5073860 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.61 45.0 4.63e-01 88.4% 80.6%
3279399 2007.2.1.2 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_2 0.61 55.0 4.90e-01 100.0% 95.7%
3250562 2004.1.1.164 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc 0.61 55.0 5.04e-01 100.0% 98.5%
3273535 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.60 55.0 4.98e-01 100.0% 88.5%
5021396 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.60 55.0 4.71e-01 100.0% 87.8%
5052576 2004.1.1.16 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.60 54.0 5.02e-01 100.0% 94.6%
3724600 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.60 52.0 4.20e-01 95.9% 80.4%
4950107 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.59 54.0 4.82e-01 100.0% 95.6%
5056072 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.59 53.0 4.74e-01 97.9% 99.0%
4286129 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.59 52.0 4.10e-01 97.9% 73.7%
3637466 2004.1.1.294 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ELP6 0.59 48.0 3.79e-01 87.7% 68.2%
5008506 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.58 53.0 4.64e-01 100.0% 96.4%
4933905 7564.1.1.1 a/b three-layered sandwiches › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Flavoprotein 0.58 53.0 4.90e-01 100.0% 94.1%
2132520 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.58 47.0 4.46e-01 86.3% 98.2%
4934548 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.58 48.0 4.55e-01 87.7% 100.0%
3940650 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.58 51.0 4.29e-01 99.3% 88.6%
3903964 2007.9.1.7 a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › NPHP3 0.58 52.0 4.92e-01 99.3% 93.1%
5049246 2006.1.4.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN 0.57 42.0 4.23e-01 76.7% 79.9%
4996416 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.57 49.0 4.53e-01 94.5% 91.1%
3739233 7512.1.1.6 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 0.56 45.0 3.97e-01 88.4% 58.1%
3395515 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.56 42.0 3.43e-01 77.4% 78.9%
4946480 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 47.0 3.93e-01 90.4% 66.8%
5001034 2006.1.5.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl 0.56 50.0 3.93e-01 99.3% 90.8%
3588890 2007.2.1.2 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_2 0.55 49.0 4.31e-01 97.9% 76.8%
5069132 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.55 47.0 4.46e-01 92.5% 98.3%
169497 2007.2.1.2 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_2 0.54 47.0 4.50e-01 96.6% 100.0%
3744751 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.54 48.0 3.57e-01 100.0% 74.0%
None 0.53 43.0 4.00e-01 87.7% 78.4%
3652313 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.53 44.0 3.80e-01 87.7% 84.1%
4941091 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.53 41.0 4.11e-01 82.2% 99.3%
4041083 2007.2.1.2 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_2 0.53 46.0 4.30e-01 97.9% 95.1%
3837596 2005.1.1.41 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C 0.52 42.0 3.95e-01 92.5% 70.3%
4015700 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 42.0 3.91e-01 87.7% 77.9%
3628405 2004.1.1.420 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, TIP49 0.52 44.0 3.93e-01 91.1% 85.4%
None 0.52 42.0 3.96e-01 87.7% 82.2%
4962865 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.51 45.0 3.84e-01 95.2% 76.6%
3978398 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 42.0 3.97e-01 87.7% 84.6%
3590702 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.51 42.0 3.66e-01 87.7% 67.3%
D2 medium residues 168-311
PDB
Domain cluster: representative
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF12826.14 best HHH_2 34.0 3.70e-08 44.4% 82.8%
PF14520.13 HHH_5 30.1 7.80e-07 38.9% 98.2%
PF13392.13 HNH_3 33.2 4.30e-08 31.2% 97.8%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kw4A00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.79 34.0 4.93e-01 72.2% 85.7%
5tt5A05 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.79 42.0 5.80e-01 91.0% 98.7%
1dgsA06 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.78 43.0 5.71e-01 75.0% 95.2%
1x9xA00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.74 33.0 4.92e-01 72.9% 98.4%
1u9lB00 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.74 36.0 5.04e-01 85.4% 97.1%
2dflA01 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.72 32.0 4.68e-01 86.1% 98.3%
1u3eM01 3.90.75.20 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › 0.71 48.0 5.54e-01 97.2% 92.5%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.59 24.0 3.56e-01 71.5% 91.1%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 23.0 3.51e-01 71.5% 93.1%
1a73A00 3.90.75.10 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A 0.56 48.0 4.63e-01 91.0% 88.3%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 26.0 3.27e-01 86.8% 83.7%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 26.0 3.31e-01 84.0% 87.5%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4141107 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.88 40.0 5.48e-01 84.0% 81.2%
4181908 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.83 41.0 5.62e-01 94.4% 88.7%
4089961 102.1.1.24 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 0.82 42.0 5.92e-01 91.0% 98.7%
4664943 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.80 39.0 5.66e-01 88.2% 100.0%
5059766 102.1.1.24 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 0.80 38.0 5.59e-01 74.3% 97.1%
4347805 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.80 39.0 5.50e-01 89.6% 94.5%
4280852 102.1.1.10 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 0.78 43.0 3.85e-01 75.7% 40.5%
4495176 102.1.1.24 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 0.77 42.0 5.68e-01 75.0% 97.5%
4456347 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.76 43.0 5.18e-01 93.1% 81.0%
4945831 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.76 35.0 4.95e-01 90.3% 90.0%
4129091 102.1.1.10 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 0.76 43.0 3.93e-01 76.4% 43.8%
4110124 102.1.1.10 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 0.76 43.0 3.65e-01 76.4% 36.8%
4320384 102.1.1.99 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2 0.75 44.0 4.02e-01 76.4% 45.9%
5052765 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.72 36.0 5.00e-01 88.2% 98.6%
4527845 102.1.1.104 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, HHH_2, HHH_5 0.63 47.0 4.41e-01 100.0% 63.4%
4358944 102.1.1.81 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2+HHH_5 0.63 47.0 4.34e-01 100.0% 61.7%
4602504 102.1.1.99 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2 0.63 47.0 4.34e-01 100.0% 60.5%
4679202 102.1.1.79 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 0.63 46.0 4.25e-01 100.0% 58.4%
4248263 102.1.1.79 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 0.62 46.0 4.24e-01 100.0% 58.9%
4353086 102.1.1.96 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2, HHH_5 0.61 46.0 4.25e-01 100.0% 62.2%
4289465 102.1.1.79 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 0.60 45.0 4.11e-01 100.0% 57.9%
3958117 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.60 47.0 4.28e-01 100.0% 62.1%
4081948 102.1.1.10 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 0.60 47.0 4.20e-01 100.0% 59.0%
4199126 102.1.1.10 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 0.60 45.0 4.23e-01 100.0% 63.3%
4336808 102.1.1.10 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 0.60 49.0 4.59e-01 96.5% 70.9%
4179566 102.1.1.24 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 0.59 48.0 4.45e-01 98.6% 68.1%
4242919 102.1.1.10 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 0.57 46.0 4.29e-01 97.9% 68.3%
4150545 102.1.1.104 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, HHH_2, HHH_5 0.57 46.0 4.30e-01 97.2% 69.7%
4332374 102.1.1.79 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 0.57 45.0 4.24e-01 97.2% 67.8%
4468191 102.1.1.10 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 0.57 45.0 4.23e-01 97.9% 67.8%
4370137 102.1.1.96 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2, HHH_5 0.56 45.0 4.20e-01 97.2% 67.8%
4066899 102.1.1.10 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 0.56 45.0 4.22e-01 96.5% 68.3%
4085490 102.1.1.104 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, HHH_2, HHH_5 0.56 45.0 4.21e-01 97.2% 68.9%
4333858 102.1.1.99 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2 0.56 45.0 4.15e-01 97.9% 68.3%
4292069 102.1.1.10 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 0.55 45.0 4.23e-01 97.2% 70.0%
4668260 102.1.1.99 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2 0.55 44.0 4.11e-01 97.9% 68.3%
4147396 102.1.1.79 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 0.55 44.0 4.12e-01 97.9% 68.3%
3941815 102.1.1.24 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 0.54 44.0 4.24e-01 97.2% 75.8%
4076819 102.1.1.79 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 0.54 46.0 4.24e-01 97.9% 70.0%
4058845 102.1.1.10 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 0.52 43.0 3.81e-01 87.5% 79.5%
4161847 102.1.1.99 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2 0.52 43.0 3.65e-01 87.5% 81.7%
D3 medium residues 322-392
PDB
CATH (71)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 53.0 5.53e-01 73.2% 78.8%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 49.0 5.08e-01 73.2% 71.2%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 48.0 4.97e-01 73.2% 94.0%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.67 50.0 4.41e-01 78.9% 62.4%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 46.0 5.05e-01 71.8% 100.0%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 42.0 4.91e-01 70.4% 93.8%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 48.0 5.32e-01 78.9% 96.4%
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 45.0 4.62e-01 71.8% 83.3%
6g1dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 44.0 4.25e-01 70.4% 87.8%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 44.0 4.17e-01 71.8% 84.1%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 45.0 4.22e-01 70.4% 87.1%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.64 47.0 3.85e-01 76.1% 69.0%
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 42.0 4.50e-01 74.6% 77.4%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 43.0 3.82e-01 70.4% 48.1%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 42.0 4.58e-01 74.6% 80.3%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 43.0 3.45e-01 70.4% 49.3%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 44.0 4.48e-01 73.2% 98.6%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 43.0 3.46e-01 71.8% 64.3%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 4.40e-01 74.6% 74.6%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 3.33e-01 71.8% 57.6%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 4.04e-01 71.8% 82.0%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 3.43e-01 71.8% 59.7%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.62 43.0 3.99e-01 74.6% 57.4%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 41.0 4.27e-01 70.4% 76.2%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 42.0 3.38e-01 71.8% 50.7%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 42.0 3.96e-01 71.8% 83.3%
1b9mB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 42.0 3.80e-01 71.8% 65.7%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 4.62e-01 100.0% 84.1%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 4.29e-01 73.2% 97.2%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 41.0 3.37e-01 70.4% 51.2%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 3.32e-01 71.8% 59.9%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 41.0 4.50e-01 70.4% 100.0%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.60 42.0 3.81e-01 74.6% 53.4%
3nrvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 44.0 3.57e-01 77.5% 82.2%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 43.0 4.04e-01 73.2% 71.3%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 41.0 3.29e-01 71.8% 54.6%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 3.81e-01 73.2% 78.7%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 43.0 3.47e-01 76.1% 60.6%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 40.0 3.70e-01 70.4% 76.3%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 3.43e-01 73.2% 51.9%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.59 42.0 4.38e-01 74.6% 87.7%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 40.0 3.84e-01 70.4% 74.1%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 40.0 4.02e-01 70.4% 73.2%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 43.0 3.55e-01 78.9% 79.2%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.58 41.0 3.85e-01 74.6% 59.8%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 41.0 4.10e-01 74.6% 77.5%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 3.65e-01 91.5% 51.9%
3npiB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.58 40.0 2.92e-01 73.2% 45.2%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.57 44.0 4.34e-01 81.7% 90.8%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 38.0 3.97e-01 70.4% 72.7%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 40.0 3.31e-01 73.2% 65.9%
3fm5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 3.56e-01 80.3% 83.1%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 3.36e-01 80.3% 72.0%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 3.39e-01 78.9% 68.4%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 40.0 3.77e-01 74.6% 74.2%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 4.38e-01 90.1% 90.0%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 40.0 3.67e-01 76.1% 79.8%
2j5oA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 38.0 3.93e-01 70.4% 76.9%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 39.0 3.95e-01 76.1% 98.6%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 3.43e-01 78.9% 69.8%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 40.0 3.24e-01 80.3% 47.7%
2fbiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 38.0 3.10e-01 71.8% 63.2%
3lstA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 3.70e-01 74.6% 74.4%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 3.32e-01 83.1% 78.1%
2dg8D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 39.0 3.03e-01 78.9% 56.6%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 3.37e-01 95.8% 47.5%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.31e-01 84.5% 89.1%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 37.0 3.66e-01 76.1% 83.3%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 3.51e-01 77.5% 77.7%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 43.0 3.56e-01 94.4% 83.6%
2rasA01 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.50 38.0 2.87e-01 83.1% 54.5%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3586837 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.88 60.0 7.05e-01 71.8% 100.0%
3590753 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 55.0 6.38e-01 71.8% 98.0%
3404418 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.81 54.0 5.51e-01 71.8% 70.0%
4945289 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 52.0 5.64e-01 70.4% 80.0%
3834548 101.1.3.12 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF26138 0.78 53.0 5.54e-01 71.8% 76.9%
3477654 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.76 52.0 5.70e-01 70.4% 90.9%
3941182 101.1.1.52 alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD 0.76 49.0 5.15e-01 71.8% 72.3%
4458965 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.76 52.0 4.97e-01 70.4% 73.8%
3986350 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.76 51.0 5.89e-01 70.4% 100.0%
2792505 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.75 51.0 5.63e-01 70.4% 87.7%
3565285 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.75 52.0 5.40e-01 74.6% 78.5%
3983783 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.75 52.0 4.66e-01 71.8% 53.7%
4606821 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.75 53.0 4.72e-01 74.6% 67.0%
4977146 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 61.0 5.40e-01 88.7% 78.0%
4174590 101.1.2.61 alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 0.73 52.0 5.46e-01 74.6% 87.7%
3953807 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.73 53.0 4.01e-01 77.5% 72.7%
5022370 101.1.1.9 alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.72 53.0 5.11e-01 77.5% 100.0%
4974140 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.70 55.0 4.91e-01 84.5% 72.0%
5002651 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.68 46.0 4.21e-01 70.4% 92.6%
4956290 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.68 46.0 4.86e-01 70.4% 90.8%
3279510 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.67 48.0 5.18e-01 76.1% 98.3%
5039934 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.67 47.0 4.96e-01 74.6% 95.4%
4061597 101.1.6.1 alpha arrays › HTH › HTH › TrpR › Trp_repressor 0.66 48.0 4.53e-01 76.1% 70.6%
4391758 101.1.6.1 alpha arrays › HTH › HTH › TrpR › Trp_repressor 0.66 49.0 4.46e-01 77.5% 65.3%
4947595 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 46.0 4.58e-01 73.2% 80.0%
4010187 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.66 47.0 4.34e-01 74.6% 83.3%
5055912 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 43.0 4.36e-01 70.4% 65.7%
4984666 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.66 46.0 4.53e-01 71.8% 90.7%
4943755 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 46.0 4.41e-01 71.8% 75.0%
3740939 101.1.2.306 alpha arrays › HTH › HTH › winged helix domain › NPR2 0.65 40.0 3.79e-01 70.4% 51.8%
166741 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.65 45.0 3.93e-01 71.8% 50.9%
5073937 101.1.2.899 alpha arrays › HTH › HTH › winged helix domain › Zn_Ribbon_1 0.65 43.0 3.70e-01 73.2% 42.6%
5077607 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.64 45.0 4.82e-01 71.8% 86.7%
4997095 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.64 46.0 3.82e-01 76.1% 54.4%
4966151 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.64 46.0 4.53e-01 74.6% 93.3%
4979728 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 44.0 4.18e-01 71.8% 67.1%
5009656 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 44.0 4.60e-01 71.8% 90.8%
5012421 101.1.2.889 alpha arrays › HTH › HTH › winged helix domain › Arc_trans_TRASH 0.63 48.0 4.20e-01 80.3% 71.4%
4980944 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 44.0 4.27e-01 73.2% 90.0%
4928836 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.63 44.0 4.45e-01 71.8% 94.3%
5077992 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 44.0 4.33e-01 73.2% 74.7%
4926890 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.63 44.0 4.04e-01 71.8% 91.1%
5027482 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 44.0 4.49e-01 73.2% 78.6%
4968115 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 45.0 4.56e-01 76.1% 85.7%
3738604 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 42.0 3.76e-01 71.8% 77.1%
5055914 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 43.0 4.79e-01 77.5% 94.5%
4473764 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.62 43.0 3.36e-01 71.8% 51.0%
5079731 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 42.0 4.31e-01 71.8% 85.7%
4060755 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 44.0 3.59e-01 77.5% 54.3%
5060354 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 44.0 4.61e-01 76.1% 86.2%
5045296 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 41.0 4.59e-01 70.4% 92.7%
4978146 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.60 41.0 4.21e-01 70.4% 91.4%
5076739 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.59 41.0 3.40e-01 71.8% 43.8%
4945046 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 41.0 3.57e-01 70.4% 51.4%
4980888 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 40.0 4.21e-01 77.5% 80.0%
4978386 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.58 41.0 4.20e-01 73.2% 88.2%
3575293 2011.2.1.13 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HTH_69 0.58 45.0 2.99e-01 81.7% 46.9%
5047331 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 42.0 3.91e-01 76.1% 67.8%
5027480 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 40.0 4.21e-01 73.2% 84.6%
5013090 304.4.1.83 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › HTH_24 0.58 44.0 3.28e-01 81.7% 38.9%
3282318 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.57 45.0 3.51e-01 83.1% 80.7%
5047333 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 41.0 3.88e-01 80.3% 64.4%
3958096 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 41.0 3.85e-01 91.5% 62.2%
3942897 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 43.0 4.21e-01 100.0% 85.0%
5072472 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 42.0 4.37e-01 91.5% 96.9%