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AGM11719.1

Arc-Vir

KC292027__AGM11719.1__HCTV5-111__00110

Identity

Accession:
KC292027 ↗
Protein ID:
AGM11719.1 ↗
Kingdom:
archaea

Quality

83.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Thumleimavirales› Druskaviridae› Tredecimvirus› Halovirus_HCTV-5

TaxID: 1273748

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 60-112
PDB
Domain cluster: rep: IMGVR_UViG_2639762614_000001-2639762614-2640210178__D87-132
D2 high residues 171-239
PDB
Domain cluster: rep: S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01089__D14-84
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01844.30 best HNH 28.0 2.80e-06 66.7% 91.5%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kizA02 3.90.650.10 Alpha Beta › Alpha-Beta Complex › Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2 › PurM-like C-terminal domain 0.60 47.0 3.27e-01 84.1% 84.0%
3mcqA02 3.90.650.10 Alpha Beta › Alpha-Beta Complex › Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2 › PurM-like C-terminal domain 0.60 46.0 3.50e-01 84.1% 84.5%
1yfmA02 1.20.200.10 Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) 0.59 41.0 2.79e-01 72.5% 85.5%
2wyhB06 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.56 45.0 3.02e-01 89.9% 91.5%
3pgbA03 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 42.0 3.67e-01 88.4% 63.8%
3un6A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 36.0 2.77e-01 100.0% 27.6%
3q23A02 3.30.70.2440 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 42.0 3.35e-01 94.2% 63.1%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5039655 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.87 80.0 7.61e-01 98.6% 90.0%
5049537 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.87 71.0 6.33e-01 94.2% 63.8%
3278018 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.87 66.0 7.25e-01 85.5% 100.0%
4937899 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.86 70.0 6.30e-01 89.9% 65.6%
3210225 378.1.1.9 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 0.85 79.0 6.41e-01 98.6% 99.2%
5080395 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.84 78.0 6.39e-01 98.6% 62.6%
2036620 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.83 77.0 6.92e-01 100.0% 77.2%
4949181 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.83 73.0 7.05e-01 97.1% 85.3%
5073918 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.83 75.0 6.67e-01 97.1% 75.8%
3199665 378.1.1.9 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 0.83 76.0 4.90e-01 100.0% 58.0%
3963335 378.1.1.9 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 0.82 76.0 6.07e-01 100.0% 90.7%
5080086 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.82 75.0 7.13e-01 98.6% 85.0%
3196822 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.80 74.0 5.35e-01 100.0% 95.0%
3590055 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.80 72.0 5.96e-01 97.1% 82.6%
3721920 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.80 63.0 4.11e-01 84.1% 44.0%
3588377 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.79 74.0 6.40e-01 100.0% 79.0%
5082962 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.79 72.0 6.04e-01 98.6% 78.2%
4959590 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.78 65.0 6.08e-01 91.3% 76.5%
3269193 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.77 65.0 5.14e-01 91.3% 50.4%
3286658 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.76 69.0 5.56e-01 100.0% 92.3%
3412005 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.76 63.0 4.95e-01 89.9% 45.7%
3952384 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.76 64.0 5.78e-01 92.8% 70.5%
4974548 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.74 68.0 6.57e-01 100.0% 97.4%
3976723 378.1.1.28 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NinG 0.73 65.0 5.31e-01 98.6% 69.6%
3944337 378.1.1.28 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NinG 0.73 65.0 5.17e-01 98.6% 68.9%
4607935 378.1.1.29 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › ICEA 0.72 66.0 5.28e-01 100.0% 57.7%
3839706 378.1.1.30 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › PF30178 0.71 62.0 5.24e-01 97.1% 68.7%
3286852 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.70 61.0 5.29e-01 92.8% 70.0%
4313114 378.1.1.30 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › PF30178 0.69 61.0 5.12e-01 100.0% 70.0%
5000599 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.69 64.0 4.64e-01 100.0% 58.3%
2628026 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.69 63.0 4.40e-01 100.0% 72.3%
3220687 3012.1.1.5 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › T6PP_C 0.63 32.0 2.90e-01 75.4% 34.7%
3839757 378.1.1.20 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › DUF1524 0.63 55.0 4.51e-01 100.0% 62.3%
5071329 2.1.1.17 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.62 50.0 4.67e-01 88.4% 75.3%
3174403 378.1.1.14 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › AI2M-like_HNH 0.60 47.0 4.88e-01 82.6% 95.4%
3934067 377.1.1.12 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-C5HC2 0.56 40.0 3.48e-01 97.1% 47.0%
3721914 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.54 47.0 4.12e-01 97.1% 63.8%
D3 medium residues 1-53
PDB
Domain cluster: rep: IMGVR_UViG_2639762614_000001-2639762614-2640210178__D87-132
CATH (70)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 65.0 6.01e-01 75.5% 62.5%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 64.0 4.98e-01 75.5% 38.1%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.89 64.0 4.53e-01 75.5% 28.2%
1ku3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 64.0 6.05e-01 75.5% 72.1%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 62.0 6.42e-01 75.5% 79.6%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 63.0 5.91e-01 79.2% 63.5%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 63.0 5.37e-01 75.5% 50.0%
6s6hA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.85 63.0 4.90e-01 79.2% 45.0%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 59.0 5.66e-01 75.5% 65.0%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 60.0 5.61e-01 77.4% 61.5%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 60.0 5.76e-01 79.2% 67.2%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 63.0 5.23e-01 81.1% 54.0%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 63.0 6.28e-01 81.1% 92.6%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 61.0 5.95e-01 79.2% 79.3%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.82 63.0 6.18e-01 81.1% 92.9%
3e7lA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 64.0 6.14e-01 88.7% 75.0%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 63.0 5.76e-01 83.0% 70.1%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 56.0 5.22e-01 81.1% 59.1%
6sdkA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.80 56.0 4.56e-01 75.5% 40.2%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 54.0 4.77e-01 71.7% 48.7%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 55.0 5.45e-01 79.2% 69.1%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.80 60.0 3.98e-01 81.1% 22.8%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 62.0 5.64e-01 83.0% 67.1%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 62.0 5.45e-01 83.0% 62.7%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 53.0 4.98e-01 71.7% 56.9%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 61.0 5.42e-01 81.1% 65.3%
1etkA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 61.0 5.38e-01 83.0% 97.3%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 54.0 4.45e-01 71.7% 44.4%
4ybaA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 56.0 4.86e-01 75.5% 53.2%
2bnmA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 53.0 4.72e-01 71.7% 54.1%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.77 55.0 3.87e-01 75.5% 35.5%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 61.0 5.99e-01 84.9% 83.9%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 56.0 5.59e-01 77.4% 75.9%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.77 58.0 4.20e-01 81.1% 53.2%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.76 64.0 5.04e-01 94.3% 50.5%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 58.0 5.34e-01 84.9% 64.3%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 52.0 5.71e-01 79.2% 95.1%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 59.0 5.11e-01 84.9% 60.0%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.74 53.0 4.23e-01 79.2% 39.6%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 5.00e-01 90.6% 62.5%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 49.0 4.67e-01 71.7% 61.5%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.73 53.0 4.05e-01 81.1% 33.3%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 55.0 4.66e-01 83.0% 50.6%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 51.0 5.45e-01 81.1% 90.9%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 52.0 5.16e-01 77.4% 80.7%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.72 59.0 4.38e-01 88.7% 38.9%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 55.0 5.51e-01 81.1% 85.2%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.72 53.0 4.42e-01 83.0% 44.7%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 51.0 5.27e-01 79.2% 82.0%
2l1pA00 1.10.260.70 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › SATB, CULT domain 0.71 51.0 4.39e-01 77.4% 51.8%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 54.0 5.32e-01 83.0% 78.6%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.70 60.0 4.95e-01 94.3% 95.7%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 50.0 4.74e-01 73.6% 62.5%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 54.0 5.35e-01 84.9% 87.3%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.31e-01 96.2% 86.1%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 4.87e-01 88.7% 73.8%
1u2wD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 51.0 4.19e-01 84.9% 44.7%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.68 52.0 3.35e-01 84.9% 92.6%
3i71B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 48.0 4.71e-01 75.5% 75.9%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 5.26e-01 94.3% 79.1%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 49.0 4.18e-01 77.4% 100.0%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.67 55.0 4.50e-01 94.3% 89.3%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.66 56.0 3.75e-01 98.1% 24.4%
3iwfB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 58.0 4.87e-01 98.1% 79.8%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 53.0 4.59e-01 94.3% 82.6%
2dt5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 56.0 5.02e-01 96.2% 74.0%
1s6lA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 5.13e-01 98.1% 88.5%
2p5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 49.0 4.94e-01 86.8% 92.3%
3vuqB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 47.0 3.25e-01 81.1% 27.3%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.54 40.0 3.80e-01 83.0% 83.6%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5030025 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.94 80.0 8.22e-01 88.7% 94.0%
4202221 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.92 66.0 5.99e-01 75.5% 58.8%
4238054 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.91 66.0 4.11e-01 75.5% 16.3%
3288971 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.91 66.0 4.57e-01 75.5% 26.7%
3284461 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.91 66.0 4.08e-01 75.5% 16.0%
4233279 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.91 66.0 4.10e-01 75.5% 16.7%
None — 0.91 65.0 4.98e-01 75.5% 36.4%
4388780 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.90 65.0 4.59e-01 75.5% 27.6%
3974736 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.90 65.0 5.44e-01 75.5% 47.1%
5058447 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.90 78.0 7.70e-01 90.6% 87.3%
4577850 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.90 65.0 5.14e-01 75.5% 40.4%
5027601 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.90 82.0 7.83e-01 98.1% 90.0%
4304581 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.90 65.0 5.22e-01 75.5% 42.6%
4497189 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.90 65.0 5.98e-01 75.5% 61.5%
3602714 101.1.1.17 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.89 64.0 7.28e-01 81.1% 100.0%
4279016 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.89 64.0 5.49e-01 75.5% 50.0%
4963466 101.1.1.368 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.89 71.0 7.71e-01 86.8% 100.0%
4876274 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.88 63.0 6.00e-01 75.5% 64.5%
4944726 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.88 63.0 6.06e-01 81.1% 66.7%
4160122 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.88 63.0 4.43e-01 75.5% 26.7%
5027602 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.88 73.0 7.25e-01 88.7% 89.1%
4372550 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.87 63.0 5.14e-01 75.5% 44.4%
2330636 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 61.0 6.19e-01 75.5% 75.5%
4997411 101.1.3.33 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF134 0.86 61.0 5.28e-01 75.5% 50.0%
3971149 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 63.0 5.37e-01 79.2% 51.2%
3401087 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.85 60.0 6.21e-01 79.2% 78.0%
4175748 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.85 61.0 5.26e-01 75.5% 52.5%
4139052 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.85 60.0 5.26e-01 75.5% 52.0%
4244028 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.85 61.0 5.82e-01 75.5% 66.7%
4947436 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.84 62.0 6.13e-01 79.2% 74.5%
3972638 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.84 62.0 5.72e-01 79.2% 63.1%
4945932 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.84 69.0 5.61e-01 88.7% 51.6%
3972713 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.83 61.0 4.93e-01 79.2% 43.2%
5070906 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.83 60.0 5.73e-01 81.1% 66.7%
4952159 101.1.1.9 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.83 61.0 5.01e-01 77.4% 45.6%
5064701 101.1.2.879 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF134 0.83 59.0 5.12e-01 75.5% 50.0%
4439853 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.83 59.0 5.35e-01 75.5% 57.1%
3795916 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.82 58.0 6.25e-01 77.4% 88.9%
4489802 101.1.1.251 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_ParB 0.82 61.0 5.69e-01 79.2% 73.8%
3879118 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.82 57.0 5.67e-01 81.1% 70.9%
3983992 101.1.4.20 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 0.81 54.0 4.70e-01 71.7% 46.3%
4263447 3801.1.1.4 ↗ extended segments › ParE2-associated antitoxin 2 (PaaA2) › ParE2-associated antitoxin 2 (PaaA2) › ParE2-associated antitoxin 2 (PaaA2) › UPF0175 0.81 61.0 6.55e-01 86.8% 95.6%
4270967 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.81 57.0 4.49e-01 75.5% 36.4%
3968335 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.81 60.0 5.77e-01 79.2% 70.0%
3953011 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.81 57.0 5.65e-01 77.4% 70.9%
4520564 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.81 67.0 5.74e-01 88.7% 63.7%
4966195 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.81 57.0 5.23e-01 81.1% 57.1%
152212 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.81 62.0 5.71e-01 83.0% 64.7%
3873677 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.81 60.0 5.45e-01 79.2% 60.0%
4334910 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.81 61.0 4.57e-01 81.1% 52.0%
3929142 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.81 65.0 6.27e-01 92.5% 76.7%
4980021 101.1.3.33 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF134 0.81 57.0 5.21e-01 75.5% 57.1%
3964388 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.80 58.0 5.46e-01 77.4% 64.1%
4534822 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.80 58.0 5.19e-01 79.2% 54.7%
4937291 101.1.1.371 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.80 60.0 6.40e-01 86.8% 95.6%
4437729 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.80 61.0 4.87e-01 81.1% 55.0%
3959929 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.80 58.0 5.05e-01 79.2% 51.2%
3970408 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.80 59.0 5.69e-01 79.2% 70.0%
4093687 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.80 60.0 5.01e-01 81.1% 73.3%
4966880 101.1.11.203 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.80 66.0 5.41e-01 96.2% 50.5%
4944862 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.80 60.0 5.21e-01 81.1% 80.0%
4934485 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.79 58.0 5.14e-01 79.2% 55.4%
5028064 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.79 61.0 4.50e-01 83.0% 38.5%
3469752 101.1.1.35 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.79 58.0 6.18e-01 84.9% 93.3%
3968864 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.78 61.0 5.37e-01 83.0% 61.3%
5028174 101.1.11.203 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.78 64.0 6.33e-01 94.3% 87.3%
5025805 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 57.0 5.63e-01 84.9% 74.5%
3943462 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.78 60.0 5.96e-01 83.0% 96.4%
3376425 101.1.1.267 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.77 57.0 4.85e-01 79.2% 49.4%
5045749 101.1.11.203 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.77 63.0 5.94e-01 94.3% 73.8%
3964284 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.77 63.0 6.09e-01 94.3% 80.0%
4143289 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.77 55.0 5.43e-01 81.1% 72.7%
3860590 101.1.1.101 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.77 65.0 6.67e-01 92.5% 98.0%
4501735 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.77 56.0 5.02e-01 79.2% 56.0%
4654073 101.1.1.371 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.76 63.0 5.64e-01 94.3% 65.3%
3949224 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.76 56.0 5.13e-01 79.2% 60.0%
3983783 101.1.1.13 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.76 54.0 4.42e-01 83.0% 42.1%
3588657 101.1.1.101 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.75 60.0 6.15e-01 86.8% 98.0%
1095020 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.75 58.0 5.34e-01 84.9% 64.3%
148652 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 52.0 4.31e-01 71.7% 44.9%
3908306 101.1.1.101 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.75 63.0 6.07e-01 92.5% 83.3%
4945097 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 57.0 5.49e-01 81.1% 76.7%
3931341 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 63.0 5.26e-01 98.1% 55.6%
4965811 101.1.1.559 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF7858 0.74 59.0 5.72e-01 86.8% 95.0%
5014241 101.1.1.371 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.72 65.0 5.53e-01 100.0% 63.5%
4023331 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.72 52.0 5.16e-01 79.2% 74.5%
4927482 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.71 52.0 5.39e-01 79.2% 90.0%
5028153 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.70 54.0 4.69e-01 84.9% 67.5%
4634108 2005.1.1.40 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g 0.69 49.0 2.93e-01 81.1% 11.0%