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AGM11720.1

Arc-Vir

KC292027__AGM11720.1__HCTV5-112__00111

Identity

Accession:
KC292027 ↗
Protein ID:
AGM11720.1 ↗
Kingdom:
archaea

Quality

64.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 33-155
PDB
D2 high residues 537-643
PDB
D3 medium residues 186-303_335-346
PDB
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5hx0A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.88 84.0 5.84e-01 100.0% 54.8%
1eurA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.86 81.0 5.73e-01 100.0% 52.6%
8gn6A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.85 81.0 5.74e-01 100.0% 54.1%
2jkbA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.85 80.0 5.62e-01 100.0% 51.8%
7mhuA01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.84 79.0 5.53e-01 99.2% 52.3%
2w38A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.84 79.0 5.79e-01 100.0% 49.2%
1ms9A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.83 78.0 5.46e-01 100.0% 52.0%
1w0pA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.83 77.0 5.42e-01 100.0% 50.9%
1v0fA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.82 77.0 5.45e-01 100.0% 46.5%
4ffgA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.81 76.0 5.53e-01 100.0% 53.1%
2yfsA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.80 74.0 4.94e-01 100.0% 50.6%
2w20B01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.79 74.0 5.16e-01 100.0% 51.2%
3qz4A00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.79 74.0 5.51e-01 100.0% 55.6%
3vsfC01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.79 73.0 5.32e-01 100.0% 50.6%
6eufA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.79 73.0 5.47e-01 100.0% 54.2%
2w5nA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.79 74.0 5.20e-01 100.0% 51.5%
4qqsB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.79 73.0 5.42e-01 100.0% 55.3%
3qeeB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.79 74.0 5.50e-01 100.0% 56.9%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.77 71.0 5.43e-01 100.0% 62.0%
1y7bA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.77 71.0 5.21e-01 100.0% 50.8%
1gydB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.76 71.0 5.23e-01 100.0% 59.7%
5hp6A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.76 71.0 5.13e-01 100.0% 73.4%
1sil000 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.76 70.0 4.94e-01 100.0% 46.7%
3akhA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.76 70.0 5.23e-01 100.0% 56.1%
4mlgG00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.75 70.0 5.15e-01 100.0% 56.5%
5jozA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.74 69.0 5.12e-01 100.0% 50.5%
4h5iB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.73 66.0 4.84e-01 100.0% 47.2%
6mlyB01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.71 65.0 5.08e-01 97.7% 58.0%
1shyB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 63.0 4.33e-01 100.0% 51.3%
1pbyB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 64.0 4.66e-01 100.0% 44.5%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.68 62.0 4.55e-01 100.0% 59.1%
6p2lA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 62.0 4.42e-01 100.0% 44.1%
1k32A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 62.0 4.48e-01 100.0% 58.3%
2i0rA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 58.0 4.26e-01 95.4% 40.7%
1mdaH00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 59.0 4.23e-01 100.0% 38.9%
6n8pA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 57.0 4.12e-01 100.0% 40.2%
1qwdB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 35.0 3.29e-01 73.1% 48.2%
1rwhA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 40.0 3.25e-01 78.5% 50.2%
3q90B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 40.0 4.06e-01 76.9% 97.7%
5tgnA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 38.0 4.16e-01 77.7% 99.1%
4kghA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.51 39.0 3.45e-01 80.8% 69.4%
3kztA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 37.0 3.72e-01 73.8% 89.4%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1738971 5.1.3.26 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.88 84.0 5.84e-01 100.0% 54.8%
4294271 5.1.3.143 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR, BNR_3 0.85 81.0 5.60e-01 100.0% 50.0%
363009 5.1.3.26 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.84 80.0 5.72e-01 100.0% 46.7%
3190425 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.84 79.0 5.52e-01 100.0% 51.5%
2832299 5.1.3.26 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.84 79.0 5.51e-01 100.0% 51.9%
3838341 5.1.3.26 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.83 79.0 5.64e-01 100.0% 50.0%
3206009 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.83 79.0 5.64e-01 100.0% 49.1%
3946251 5.1.3.26 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.82 77.0 5.38e-01 100.0% 43.4%
3328753 5.1.3.26 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.82 78.0 5.57e-01 100.0% 47.3%
4961581 5.1.3.270 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR 0.82 77.0 5.23e-01 100.0% 48.7%
4414940 5.1.2.5 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_68 0.81 75.0 4.83e-01 100.0% 46.0%
None 0.80 74.0 4.83e-01 100.0% 45.8%
5069442 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.80 75.0 5.65e-01 100.0% 59.3%
3977885 5.1.3.26 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.80 75.0 5.36e-01 100.0% 45.2%
3692143 5.1.2.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.80 74.0 5.30e-01 100.0% 56.3%
3693895 5.1.2.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.80 74.0 5.17e-01 100.0% 62.6%
1503899 5.1.2.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.79 73.0 5.42e-01 100.0% 55.3%
5040298 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.79 73.0 4.92e-01 100.0% 43.5%
4017005 5.1.2.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.78 73.0 5.38e-01 100.0% 53.7%
4963742 5.1.3.26 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.78 74.0 5.20e-01 100.0% 42.2%
5035135 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.77 72.0 4.97e-01 100.0% 46.2%
4673651 5.1.4.51 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BNR_4 0.77 72.0 4.81e-01 100.0% 42.6%
5039580 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.76 70.0 5.01e-01 100.0% 48.8%
4940718 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.76 71.0 5.03e-01 100.0% 50.4%
4927714 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.76 70.0 4.87e-01 100.0% 40.7%
5038973 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.75 70.0 4.95e-01 100.0% 46.7%
4929084 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.75 70.0 4.85e-01 100.0% 55.8%
3709267 5.1.2.33 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 0.75 69.0 5.04e-01 100.0% 52.6%
5022489 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.75 70.0 4.67e-01 100.0% 36.3%
4941519 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.74 67.0 4.71e-01 100.0% 38.8%
5068404 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.73 67.0 5.01e-01 100.0% 60.3%
4026437 5.1.3.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › CyRPA 0.73 67.0 4.95e-01 100.0% 53.8%
3701911 5.1.2.33 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 0.72 66.0 5.43e-01 97.7% 68.2%
4969245 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.71 61.0 5.78e-01 93.1% 92.3%
3716012 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 64.0 4.55e-01 100.0% 47.9%
3603190 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 65.0 4.04e-01 100.0% 24.6%
3936285 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 64.0 4.96e-01 100.0% 52.0%
4942581 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 64.0 4.58e-01 100.0% 39.7%
3721353 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 64.0 4.61e-01 100.0% 50.3%
3628460 3308.1.1.0 beta duplicates or obligate multimers › periplasmic lysozyme inhibitor of I-type lysozyme-like › periplasmic lysozyme inhibitor of I-type lysozyme › periplasmic lysozyme inhibitor of I-type lysozyme 0.68 42.0 5.09e-01 74.6% 98.8%
3459220 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.68 61.0 4.59e-01 100.0% 53.5%
3342083 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.68 62.0 4.74e-01 100.0% 45.8%
3326445 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 62.0 4.43e-01 100.0% 46.8%
3359195 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.68 61.0 4.57e-01 100.0% 50.8%
3391128 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.68 62.0 4.28e-01 100.0% 33.2%
3429037 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.67 60.0 4.53e-01 100.0% 50.8%
4941858 5.1.4.49 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PSII_BNR 0.66 61.0 4.37e-01 100.0% 36.7%
4391960 5.1.7.5 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › BNR, Sortilin-Vps10 0.66 59.0 3.49e-01 100.0% 15.0%
4151176 5.1.4.52 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sortilin-Vps10 0.66 53.0 3.90e-01 98.5% 33.6%
3660454 5.1.5.96 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_3 0.66 59.0 4.52e-01 98.5% 45.4%
3938509 5.1.4.304 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_2nd 0.65 59.0 4.40e-01 100.0% 44.9%
3836190 5.1.4.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.65 59.0 4.00e-01 100.0% 46.8%
5010861 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 59.0 4.19e-01 100.0% 47.3%
3991341 5.1.4.304 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_2nd 0.64 58.0 3.72e-01 100.0% 21.9%
3996007 5.1.5.4 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N 0.64 58.0 4.01e-01 100.0% 37.5%
3825410 5.1.4.466 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_1st, Beta-prop_WDR11_2nd 0.64 59.0 3.53e-01 100.0% 21.5%
4540629 5.1.3.179 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Sortilin-Vps10 0.64 58.0 3.41e-01 99.2% 23.6%
2491500 5.1.7.4 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › BNR_6, Sortilin-Vps10 0.64 58.0 3.89e-01 100.0% 37.2%
3242312 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 59.0 4.48e-01 100.0% 55.9%
3740970 5.1.4.249 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_pof12 0.64 58.0 4.25e-01 100.0% 42.3%
3825573 5.1.5.184 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_WDR11_2nd 0.64 58.0 4.09e-01 100.0% 54.5%
4180235 243.3.1.5 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP 0.63 36.0 4.48e-01 75.4% 91.3%
3789395 5.1.4.348 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_1st 0.63 57.0 4.21e-01 100.0% 51.6%
3445792 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 56.0 4.04e-01 100.0% 45.3%
3373579 5.1.4.304 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_2nd 0.62 56.0 4.01e-01 100.0% 53.4%
4402089 5.1.7.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.62 56.0 3.31e-01 100.0% 17.2%
3496018 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 54.0 3.69e-01 100.0% 42.3%
4444078 243.3.1.5 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP 0.60 35.0 3.76e-01 70.8% 66.1%
4010189 243.1.1.21 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3828 0.53 39.0 3.87e-01 75.4% 89.6%
3280381 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.53 40.0 3.88e-01 78.5% 97.9%
D4 medium residues 304-334_347-513
PDB