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AGM11790.1

Arc-Vir

KC292028__AGM11790.1__HCTV2-15__00015

Identity

Accession:
KC292028 ↗
Protein ID:
AGM11790.1 ↗
Kingdom:
archaea

Quality

67.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Saparoviridae› Samsavirus› Haloarcula_californiae_tailed_virus_2

TaxID: 1273747

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 19-74
PDB
Domain cluster: representative
CATH (76)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 67.0 6.57e-01 85.7% 76.3%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 62.0 4.96e-01 89.3% 43.8%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 62.0 5.88e-01 89.3% 70.8%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 60.0 5.74e-01 85.7% 70.3%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 62.0 5.96e-01 91.1% 74.6%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 60.0 5.85e-01 87.5% 73.8%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 60.0 5.35e-01 89.3% 57.5%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 54.0 5.52e-01 83.9% 74.5%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 60.0 6.11e-01 89.3% 85.5%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 59.0 6.08e-01 91.1% 92.3%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 51.0 5.78e-01 76.8% 100.0%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 56.0 5.67e-01 91.1% 80.4%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 6.41e-01 100.0% 96.3%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 58.0 5.95e-01 91.1% 88.9%
1le8A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 60.0 6.16e-01 94.6% 92.5%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 60.0 5.67e-01 91.1% 73.1%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 56.0 5.35e-01 89.3% 69.7%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 60.0 5.54e-01 91.1% 70.0%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 55.0 5.69e-01 85.7% 90.0%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 6.06e-01 89.3% 91.4%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 53.0 4.78e-01 89.3% 56.4%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 54.0 5.19e-01 91.1% 70.3%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.28e-01 92.9% 85.0%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 55.0 5.79e-01 91.1% 96.0%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 54.0 5.29e-01 89.3% 74.6%
2vqcA00 1.10.10.1470 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like 0.71 56.0 5.30e-01 94.6% 71.4%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 5.45e-01 92.9% 89.3%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 5.67e-01 91.1% 100.0%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 5.15e-01 92.9% 84.5%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 5.33e-01 96.4% 100.0%
1qbjC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 5.34e-01 91.1% 78.8%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 47.0 4.26e-01 76.8% 52.6%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 57.0 5.55e-01 96.4% 100.0%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 59.0 5.52e-01 100.0% 76.1%
2dg8D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.69 61.0 4.33e-01 100.0% 50.3%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 54.0 5.35e-01 87.5% 82.0%
3anpB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.69 56.0 3.91e-01 92.9% 28.4%
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 5.71e-01 94.6% 100.0%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.39e-01 94.6% 98.6%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 59.0 5.02e-01 98.2% 86.2%
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 5.01e-01 92.9% 86.4%
2raeA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 48.0 5.32e-01 75.0% 100.0%
3r4kB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 5.38e-01 92.9% 100.0%
2o7tA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.67 56.0 3.95e-01 96.4% 33.5%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 56.0 4.59e-01 92.9% 67.3%
3mvpA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 48.0 5.10e-01 75.0% 91.5%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 58.0 5.03e-01 96.4% 74.1%
3c07B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.67 56.0 3.79e-01 94.6% 41.1%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 57.0 4.32e-01 96.4% 54.5%
3kkdA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.67 55.0 3.84e-01 94.6% 27.8%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 56.0 4.25e-01 92.9% 53.5%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 56.0 4.66e-01 98.2% 85.4%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 58.0 5.08e-01 100.0% 93.0%
6el2B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 50.0 5.26e-01 83.9% 100.0%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.65 58.0 3.72e-01 100.0% 94.5%
2f07B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.65 54.0 3.77e-01 94.6% 58.7%
2zb9A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 47.0 4.90e-01 78.6% 88.0%
5gp9A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 44.0 4.68e-01 71.4% 91.7%
3cdlA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 50.0 5.09e-01 87.5% 94.4%
2fd5A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 45.0 4.72e-01 73.2% 87.5%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 54.0 4.00e-01 96.4% 54.3%
2hyjA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 43.0 4.58e-01 73.2% 91.3%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 52.0 4.70e-01 94.6% 88.7%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 53.0 4.99e-01 96.4% 97.1%
2oi8A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 49.0 3.48e-01 94.6% 28.1%
2id3A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 52.0 3.91e-01 94.6% 72.5%
2k9lA00 1.10.10.1330 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain 0.62 47.0 4.31e-01 89.3% 61.8%
1zk8A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 44.0 4.77e-01 76.8% 100.0%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 53.0 3.96e-01 98.2% 54.1%
3colB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.60 47.0 3.49e-01 92.9% 32.2%
3ni7A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.60 48.0 3.51e-01 94.6% 51.1%
4jykA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.59 45.0 4.51e-01 89.3% 89.7%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 3.84e-01 96.4% 56.8%
1rktA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.57 40.0 4.13e-01 76.8% 81.1%
2id3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.56 41.0 4.36e-01 85.7% 95.9%
7ml0M01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.54 40.0 3.75e-01 91.1% 93.9%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4962042 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.97 91.0 6.81e-01 98.2% 45.8%
5013822 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.94 82.0 8.50e-01 92.9% 100.0%
1764926 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.88 67.0 7.20e-01 87.5% 95.8%
3452941 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.86 67.0 7.08e-01 91.1% 94.0%
3717702 101.1.2.304 ↗ alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase 0.83 65.0 6.23e-01 91.1% 73.8%
5053252 101.1.2.304 ↗ alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase 0.81 71.0 5.61e-01 96.4% 81.8%
4165729 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.80 66.0 4.62e-01 89.3% 30.3%
4944342 101.1.2.899 ↗ alpha arrays › HTH › HTH › winged helix domain › Zn_Ribbon_1 0.80 63.0 5.06e-01 91.1% 45.7%
5078072 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.79 60.0 5.77e-01 87.5% 70.8%
4962128 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.79 63.0 5.81e-01 91.1% 68.6%
4895784 101.1.2.623 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25983 0.79 62.0 5.88e-01 91.1% 71.6%
3244958 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.78 63.0 6.05e-01 96.4% 76.9%
3257506 101.1.1.333 ↗ alpha arrays › HTH › HTH › Three-helical HTH › ATG29_N 0.78 65.0 5.98e-01 94.6% 70.7%
5056141 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 61.0 6.18e-01 91.1% 87.3%
5030083 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 61.0 6.45e-01 92.9% 96.0%
3923654 101.1.1.356 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_11 0.77 57.0 5.60e-01 85.7% 75.0%
4608719 3541.1.1.2 ↗ beta sandwiches › Atg29-Atg31 › Atg29-Atg31 › Atg29-Atg31 › ATG29_N 0.76 65.0 5.57e-01 98.2% 60.0%
3937075 101.1.1.62 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.76 55.0 5.57e-01 85.7% 78.2%
3928067 101.1.1.356 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_11 0.76 55.0 5.57e-01 85.7% 78.2%
4979948 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 57.0 5.74e-01 92.9% 81.8%
2792505 101.1.2.139 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.76 60.0 5.99e-01 92.9% 84.2%
4945046 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 56.0 4.49e-01 89.3% 41.9%
4954539 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 58.0 5.99e-01 91.1% 96.0%
5032612 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 57.0 5.78e-01 89.3% 83.6%
4174590 101.1.2.61 ↗ alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 0.75 63.0 6.05e-01 98.2% 80.0%
3454275 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.75 59.0 6.15e-01 85.7% 98.0%
5078899 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.75 63.0 5.08e-01 94.6% 92.7%
5062184 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.75 55.0 5.42e-01 89.3% 73.3%
4976482 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 53.0 5.04e-01 94.6% 64.6%
3401087 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.74 59.0 6.24e-01 98.2% 98.0%
4979789 101.1.2.78 ↗ alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.73 55.0 5.54e-01 85.7% 81.8%
5077611 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 58.0 4.51e-01 87.5% 75.2%
4404513 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.73 65.0 5.91e-01 100.0% 76.0%
4977498 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 53.0 4.81e-01 89.3% 57.3%
4948165 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.73 62.0 5.01e-01 96.4% 91.8%
4961952 101.1.1.540 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.73 58.0 5.34e-01 89.3% 70.7%
4962234 101.1.1.540 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.73 58.0 5.31e-01 89.3% 70.7%
5032601 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.73 57.0 5.78e-01 92.9% 89.1%
3694109 101.1.2.22 ↗ alpha arrays › HTH › HTH › winged helix domain › PCI 0.72 61.0 4.81e-01 96.4% 62.5%
4966784 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 59.0 5.81e-01 96.4% 85.0%
3636947 101.1.3.9 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Myb_DNA-bind_8 0.72 57.0 5.95e-01 87.5% 96.0%
3904295 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.72 64.0 6.10e-01 100.0% 86.2%
4961282 101.1.1.540 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.72 58.0 5.53e-01 89.3% 81.5%
4943990 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.72 61.0 4.70e-01 96.4% 81.2%
4994133 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.72 52.0 4.52e-01 87.5% 50.6%
4955603 101.1.1.540 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.72 57.0 5.49e-01 89.3% 81.5%
3903736 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.72 63.0 5.89e-01 100.0% 80.0%
3873677 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.71 59.0 5.52e-01 96.4% 72.9%
3738604 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 62.0 5.02e-01 96.4% 77.1%
176312 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.71 60.0 5.24e-01 94.6% 70.6%
3793383 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.71 55.0 5.29e-01 96.4% 73.8%
5050597 101.1.1.540 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.71 58.0 5.91e-01 91.1% 96.4%
4961695 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.71 61.0 5.51e-01 94.6% 81.3%
4961639 101.1.1.540 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.71 57.0 5.09e-01 89.3% 66.3%
5045749 101.1.11.203 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.71 52.0 4.93e-01 87.5% 66.2%
5034407 101.1.1.540 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.71 60.0 5.55e-01 92.9% 75.7%
5072420 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 54.0 5.64e-01 91.1% 94.0%
3545682 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.71 59.0 3.76e-01 94.6% 20.7%
3793393 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.71 54.0 4.79e-01 92.9% 57.5%
4966195 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.70 60.0 5.65e-01 96.4% 91.4%
5006582 101.1.1.540 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.70 58.0 5.40e-01 92.9% 74.3%
3767621 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.69 55.0 4.91e-01 96.4% 61.3%
3888041 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.69 59.0 5.68e-01 100.0% 86.2%
5073990 101.1.1.540 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.69 56.0 5.14e-01 92.9% 70.7%
5073390 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.69 60.0 4.65e-01 100.0% 84.8%
1879843 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.68 57.0 4.76e-01 94.6% 59.6%
4975400 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.68 59.0 4.74e-01 100.0% 90.4%
4963579 183.1.1.1 ↗ alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repr_C 0.68 58.0 4.32e-01 92.9% 46.7%
3285817 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.68 56.0 5.17e-01 94.6% 80.0%
3279939 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.68 57.0 5.15e-01 96.4% 77.5%
5065949 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 54.0 5.28e-01 87.5% 81.7%
4942968 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 59.0 5.59e-01 100.0% 98.6%
4950777 101.1.1.371 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.68 49.0 4.54e-01 87.5% 61.4%
3946469 101.1.2.15 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR 0.67 56.0 5.10e-01 92.9% 70.7%
2546 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.67 56.0 5.09e-01 96.4% 79.5%
3243454 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.67 55.0 5.49e-01 98.2% 90.0%
5065637 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.67 55.0 4.70e-01 92.9% 73.1%
3588502 101.1.2.21 ↗ alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.66 56.0 5.06e-01 92.9% 77.3%
3966444 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 55.0 4.82e-01 96.4% 68.9%
3280565 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 51.0 5.33e-01 83.9% 94.0%
4987074 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.65 53.0 5.09e-01 94.6% 87.7%
4944795 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 52.0 5.08e-01 94.6% 84.6%
3941631 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 50.0 5.07e-01 83.9% 85.5%
3962344 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.65 53.0 4.98e-01 94.6% 80.0%
4333531 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 46.0 4.86e-01 85.7% 86.0%
3973750 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.64 53.0 4.93e-01 96.4% 82.7%
3796173 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 53.0 3.81e-01 96.4% 38.3%
4007697 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.64 49.0 3.91e-01 83.9% 40.9%
4952959 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.63 53.0 4.94e-01 94.6% 84.3%
1247873 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.62 49.0 4.58e-01 94.6% 74.0%
3928877 101.1.15.1 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.61 49.0 4.33e-01 92.9% 73.3%
4284318 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.61 48.0 4.51e-01 94.6% 76.0%
3960008 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.60 51.0 4.73e-01 92.9% 77.1%
3974144 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.60 47.0 4.40e-01 92.9% 76.0%
1247915 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.60 47.0 4.49e-01 94.6% 78.9%
4944479 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.60 47.0 4.51e-01 92.9% 80.0%
D2 medium residues 77-117
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1orqC01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.94 84.0 5.13e-01 100.0% 18.3%
1ixmA01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.92 84.0 7.35e-01 100.0% 69.5%
3ziuA01 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.89 81.0 4.91e-01 100.0% 17.4%
1d2mA03 6.10.140.240 Special › Helix non-globular › Helix Hairpins › 0.89 79.0 6.72e-01 100.0% 62.1%
3k59A06 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.87 73.0 7.02e-01 95.1% 83.0%
7e9uA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.86 66.0 3.72e-01 87.8% 7.7%
4ar9A02 1.10.390.20 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › 0.80 63.0 4.29e-01 90.2% 25.4%
1yzmA00 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.79 67.0 6.55e-01 100.0% 87.0%
6h5hA00 1.10.150.110 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like 0.79 70.0 5.83e-01 100.0% 57.7%
1z0jB00 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.79 66.0 6.23e-01 100.0% 78.4%
4u1cA01 4.10.860.10 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain 0.77 65.0 6.00e-01 95.1% 76.9%
1e52A00 4.10.860.10 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain 0.74 60.0 5.42e-01 92.7% 66.1%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4063607 192.17.1.11 ↗ alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › UVR 0.86 72.0 7.35e-01 97.6% 97.5%
4168739 192.11.1.1 ↗ alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR 0.84 72.0 7.29e-01 100.0% 100.0%
4877881 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.80 67.0 6.78e-01 97.6% 97.5%
4189162 192.11.1.0 ↗ alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB 0.78 61.0 6.24e-01 95.1% 95.0%
4419795 192.11.1.1 ↗ alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR 0.77 66.0 6.74e-01 100.0% 100.0%
3386877 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.70 59.0 4.03e-01 100.0% 29.4%