AGM11821.1

Arc-Vir

KC292028__AGM11821.1__HCTV2-51__00051

Identity

67.5 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Saparoviridae› Samsavirus› Haloarcula_californiae_tailed_virus_2

TaxID: 1273747

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 11-123

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
7degA01	1.20.210.10	Mainly Alpha › Up-down Bundle › Cytochrome C Oxidase; Chain A › Cytochrome c oxidase-like, subunit I domain	0.60	47.0	3.00e-01	83.2%	78.7%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4984022	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.62	44.0	4.41e-01	72.6%	97.4%
4057629	3869.1.1.1 ↗	alpha arrays › Mitochondrial 54S ribosomal protein L2 › Mitochondrial 54S ribosomal protein L2 › Mitochondrial 54S ribosomal protein L2 › Ribosomal_L27_C	0.61	45.0	3.65e-01	76.1%	49.5%
4615849	7013.1.1.1 ↗	alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1	0.61	42.0	3.54e-01	99.1%	42.7%
5042312	375.1.9.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase	0.60	35.0	3.64e-01	98.2%	62.9%
4991512	150.1.1.0 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin	0.55	38.0	3.64e-01	70.8%	80.8%
3601078	109.4.1.1423 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec7-like_HUS, TPR_28	0.54	41.0	2.38e-01	81.4%	32.4%