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KC295538.1__AGC34985.1__X__00305
Bact-VirKC295538.1__AGC34985.1__X__00305
Identity
- Accession:
- KC295538 ↗
- Kingdom:
- phage
Quality
80.8
mean pLDDT
Taxonomy
TaxID: 1273738
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-58
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ge2A00 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.75 | 61.0 | 5.16e-01 | 100.0% | 53.9% |
| 2hcuA00 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.73 | 51.0 | 3.51e-01 | 73.6% | 89.3% |
| 1v7lA01 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.67 | 46.0 | 3.28e-01 | 71.7% | 86.6% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.66 | 52.0 | 4.47e-01 | 100.0% | 54.8% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.65 | 56.0 | 4.30e-01 | 98.1% | 75.8% |
| 1txdA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 52.0 | 4.15e-01 | 100.0% | 59.5% |
| 1v5pA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 52.0 | 4.31e-01 | 98.1% | 75.7% |
| 1r7lA00 | 3.30.2120.10 | Alpha Beta › 2-Layer Sandwich › Bacillus phage protein › Bacillus phage protein-like | 0.62 | 44.0 | 3.54e-01 | 92.5% | 38.8% |
| 6grrB01 | 3.30.457.10 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain | 0.61 | 52.0 | 4.54e-01 | 100.0% | 63.3% |
| 3sc7X01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.61 | 46.0 | 2.92e-01 | 90.6% | 49.7% |
| 3qzqA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 54.0 | 4.94e-01 | 100.0% | 82.6% |
| 2ijd101 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.60 | 54.0 | 3.70e-01 | 100.0% | 31.7% |
| 5xrwC00 | 2.30.330.10 | Mainly Beta › Roll › Surface presentation of antigens (SPOA) › SpoA-like | 0.60 | 43.0 | 3.90e-01 | 79.2% | 83.3% |
| 3kstA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.60 | 45.0 | 2.96e-01 | 90.6% | 50.2% |
| 4h03A02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.59 | 43.0 | 3.02e-01 | 81.1% | 80.7% |
| 1ddvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 48.0 | 3.98e-01 | 96.2% | 94.2% |
| 2k2jA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 46.0 | 3.73e-01 | 94.3% | 64.1% |
| 6ku8A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 52.0 | 4.75e-01 | 100.0% | 82.6% |
| 1wxcB01 | 3.30.1880.10 | Alpha Beta › 2-Layer Sandwich › protein ne1242 fold › protein ne1242 domain like | 0.58 | 51.0 | 4.91e-01 | 100.0% | 91.9% |
| 5aguA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.57 | 41.0 | 3.15e-01 | 77.4% | 79.4% |
| 1qs1A01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.55 | 46.0 | 3.18e-01 | 100.0% | 86.7% |
| 5wtzA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.53 | 40.0 | 2.77e-01 | 83.0% | 87.3% |
| 1xkiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 44.0 | 3.45e-01 | 100.0% | 41.4% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.53 | 44.0 | 3.72e-01 | 98.1% | 75.5% |
| 3kf3A02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.53 | 46.0 | 3.19e-01 | 100.0% | 48.6% |
| 6htnA01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.52 | 43.0 | 3.30e-01 | 100.0% | 64.2% |
| 2sliA03 | 2.40.220.10 | Mainly Beta › Beta Barrel › Intramolecular trans-sialidase; domain 3 › Intramolecular Trans-sialidase; Domain 3 | 0.51 | 37.0 | 3.29e-01 | 100.0% | 47.0% |
| 2zbbA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 39.0 | 3.61e-01 | 94.3% | 85.2% |
| 3lifA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 40.0 | 3.55e-01 | 96.2% | 70.0% |
| 5cvmA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 40.0 | 2.59e-01 | 96.2% | 85.4% |
| 2xf4A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 38.0 | 2.73e-01 | 92.5% | 84.3% |
| 3d4rB02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.50 | 40.0 | 3.74e-01 | 90.6% | 88.2% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 134104 | 9.1.1.22 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3642 | 0.75 | 61.0 | 5.16e-01 | 100.0% | 53.9% |
| 3295296 | 4.8.1.7 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › SAWADEE | 0.75 | 52.0 | 5.57e-01 | 73.6% | 97.8% |
| 4108467 | 3459.1.1.1 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 | 0.69 | 54.0 | 4.69e-01 | 100.0% | 54.1% |
| 3575893 | 3459.1.1.1 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 | 0.68 | 53.0 | 4.44e-01 | 100.0% | 48.4% |
| 5049591 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 57.0 | 5.37e-01 | 92.5% | 100.0% |
| 3408648 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.68 | 58.0 | 4.79e-01 | 100.0% | 77.0% |
| 3513184 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.68 | 50.0 | 3.33e-01 | 81.1% | 44.4% |
| 3603325 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.68 | 50.0 | 3.19e-01 | 100.0% | 15.6% |
| 5025277 | 284.1.1.13 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP-like_N | 0.66 | 49.0 | 4.93e-01 | 98.1% | 78.2% |
| 3571692 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.66 | 55.0 | 3.32e-01 | 94.3% | 39.2% |
| 3558036 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.66 | 46.0 | 3.39e-01 | 75.5% | 85.3% |
| 4001937 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.65 | 55.0 | 3.57e-01 | 94.3% | 60.4% |
| 3995797 | 220.1.1.160 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MADD | 0.65 | 57.0 | 5.33e-01 | 100.0% | 90.8% |
| 3966739 | 1.1.10.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Surface presentation of antigens (SPOA) › FliMN_C | 0.63 | 46.0 | 4.59e-01 | 81.1% | 80.0% |
| 5043413 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.62 | 51.0 | 4.19e-01 | 100.0% | 49.1% |
| 3476015 | 220.1.1.160 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MADD | 0.61 | 52.0 | 4.39e-01 | 98.1% | 56.8% |
| 4995786 | 3153.1.1.0 ↗ | a+b two layers › PipX › PipX › PipX | 0.60 | 45.0 | 3.80e-01 | 90.6% | 49.4% |
| 3963561 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.60 | 48.0 | 4.39e-01 | 88.7% | 68.6% |
| 2779726 | 1.1.17.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 | 0.60 | 53.0 | 3.61e-01 | 100.0% | 30.6% |
| 3173787 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 51.0 | 4.03e-01 | 100.0% | 65.8% |
| 3405494 | 3112.1.1.0 ↗ | beta barrels › Uncharacterized protein Dsy0195 › Uncharacterized protein Dsy0195 › Uncharacterized protein Dsy0195 | 0.60 | 52.0 | 4.11e-01 | 98.1% | 50.0% |
| 4092486 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.59 | 45.0 | 3.28e-01 | 90.6% | 40.0% |
| 3970394 | 4252.1.1.10 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 | 0.59 | 49.0 | 3.85e-01 | 100.0% | 46.9% |
| 3218627 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.59 | 44.0 | 3.04e-01 | 86.8% | 47.9% |
| 4656484 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.57 | 42.0 | 3.18e-01 | 84.9% | 46.7% |
| 3923314 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.56 | 49.0 | 3.14e-01 | 98.1% | 30.6% |
| 5071623 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 43.0 | 2.85e-01 | 92.5% | 93.3% |
| 3924385 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.55 | 44.0 | 2.86e-01 | 100.0% | 93.8% |
| 4304760 | 301.8.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS | 0.54 | 42.0 | 3.57e-01 | 98.1% | 72.7% |
| 3966871 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.53 | 43.0 | 3.33e-01 | 94.3% | 94.6% |
| 3962189 | 375.13.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain | 0.52 | 42.0 | 4.07e-01 | 100.0% | 80.0% |
| 3823449 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.51 | 41.0 | 2.69e-01 | 98.1% | 82.4% |
| 140035 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.51 | 38.0 | 2.73e-01 | 92.5% | 84.3% |