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KC310805.1__AGK86682.1__S-CBP42_0031__00027

Bact-Vir

KC310805.1__AGK86682.1__S-CBP42_0031__00027

Identity

Accession:
KC310805 ↗
Kingdom:
phage

Quality

68.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Aegirvirus› Synechococcus_phage_S-CBP42

TaxID: 461711

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 17-70
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x26A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.62 44.0 3.08e-01 75.9% 30.8%
6z4xA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.57 48.0 3.52e-01 96.3% 81.3%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3320259 10.12.1.16 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy 0.77 54.0 3.57e-01 74.1% 19.5%
3685389 223.2.1.23 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › NPR3 0.73 64.0 4.41e-01 100.0% 56.8%
4019694 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.69 57.0 5.85e-01 94.4% 100.0%
4981965 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.65 50.0 4.05e-01 83.3% 81.9%
3454754 109.4.1.1303 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_PRP39_N, HAT_PRP39_C 0.64 45.0 2.55e-01 77.8% 5.8%
5067234 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.64 52.0 4.82e-01 98.1% 70.0%