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KC311669.1__AGC35329.1__AB3_0028__00003

Bact-Vir

KC311669.1__AGC35329.1__AB3_0028__00003

Identity

Accession:
KC311669 ↗
Kingdom:
phage

Quality

96.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autoscriptoviridae› Friunavirus› Acinetobacter_phage_AB3

TaxID: 1273713

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 4-69
PDB
Domain cluster: rep: JF974315.1__AGN38689.1__RHYG_00020__00020__D67-148
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00182.25 best Glyco_hydro_19 29.3 1.10e-06 95.5% 20.3%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wvuB02 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.87 81.0 5.58e-01 100.0% 39.3%
2cjlA02 3.30.20.10 Alpha Beta › 2-Layer Sandwich › Endochitinase; domain 2 › Endochitinase, domain 2 0.84 62.0 6.48e-01 77.3% 100.0%
2z39A02 3.30.20.10 Alpha Beta › 2-Layer Sandwich › Endochitinase; domain 2 › Endochitinase, domain 2 0.83 61.0 6.53e-01 77.3% 100.0%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3973873 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.91 86.0 5.81e-01 100.0% 53.1%
159294 235.1.1.2 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_19 0.86 81.0 5.48e-01 100.0% 36.8%
3824608 235.1.1.2 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_19 0.86 81.0 5.11e-01 100.0% 27.1%
4153903 235.1.1.2 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_19 0.85 79.0 5.23e-01 100.0% 31.5%
3417578 235.1.1.2 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_19 0.84 79.0 5.12e-01 100.0% 29.6%
3647235 235.1.1.2 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_19 0.83 78.0 6.00e-01 100.0% 56.3%
3753641 7579.1.1.20 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › LCAT 0.59 45.0 2.87e-01 86.4% 95.0%
D2 medium residues 88-120
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5yk4A03 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.68 57.0 3.77e-01 100.0% 76.9%
8dtpC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 49.0 2.90e-01 84.8% 31.1%
3ibtA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.64 53.0 3.32e-01 100.0% 30.6%
1kf6D00 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.64 54.0 3.74e-01 100.0% 84.9%
7xokN01 3.30.260.10 Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain 0.62 46.0 4.25e-01 97.0% 63.5%
5c8aA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.60 46.0 3.64e-01 100.0% 38.5%
2o8bB05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 53.0 3.10e-01 100.0% 24.1%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4324528 284.1.3.1 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 0.79 63.0 4.89e-01 93.9% 48.0%
4965039 2488.1.1.1 ↗ a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase 0.67 55.0 3.34e-01 100.0% 15.1%
4990391 102.2.1.0 ↗ alpha arrays › HhH/H2TH › H2TH › H2TH 0.66 51.0 3.71e-01 97.0% 57.3%