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KC348604.1__AGF87673.1__phiS10_0024__00024

Bact-Vir

KC348604.1__AGF87673.1__phiS10_0024__00024

Identity

Accession:
KC348604 ↗
Kingdom:
phage

Quality

90.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptococcus_phage_phiS10

TaxID: 1289601

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-71
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2el8A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.58 42.0 3.82e-01 77.3% 83.5%
1sb2B00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.56 40.0 3.36e-01 77.3% 74.2%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 36.0 3.18e-01 71.2% 50.9%
2cqaA01 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.54 36.0 3.58e-01 71.2% 63.5%
1vw4M01 2.30.30.790 Mainly Beta › Roll › SH3 type barrels. › 0.53 40.0 3.30e-01 83.3% 61.4%
1v7pB00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.53 37.0 3.14e-01 77.3% 68.5%
7bjkA02 3.55.40.20 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain 0.52 37.0 3.15e-01 75.8% 70.8%
1e3hA03 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.52 37.0 2.71e-01 78.8% 31.5%
8c5yA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 42.0 3.19e-01 97.0% 58.2%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3888254 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 41.0 4.68e-01 97.0% 88.9%
3275661 2007.1.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.60 41.0 3.27e-01 71.2% 96.6%
3512466 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 45.0 3.79e-01 87.9% 84.8%
3969410 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.57 40.0 3.33e-01 72.7% 63.0%
5069582 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 36.0 3.23e-01 71.2% 43.2%
3764969 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 38.0 3.35e-01 72.7% 54.8%
3235213 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 37.0 3.08e-01 71.2% 51.5%
4943785 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 35.0 2.86e-01 71.2% 30.7%
3917008 382.1.1.2 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP 0.55 40.0 3.82e-01 78.8% 91.3%
4606349 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 38.0 3.43e-01 74.2% 74.7%
3620222 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 37.0 3.10e-01 71.2% 39.2%
3938170 2484.1.1.4 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.54 42.0 3.40e-01 89.4% 88.7%
3635276 219.1.1.93 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF6540 0.54 45.0 3.69e-01 98.5% 93.3%
2168051 2.1.1.32 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TIP49 0.54 35.0 3.36e-01 71.2% 54.2%
4468964 209.1.1.1 ↗ a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C 0.54 38.0 3.14e-01 77.3% 64.9%
4403166 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.53 33.0 3.41e-01 71.2% 64.6%
4674170 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.52 39.0 3.29e-01 83.3% 66.7%
3413058 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.51 38.0 3.54e-01 83.3% 97.8%
3539840 2.1.1.188 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSDE1 0.51 34.0 3.22e-01 71.2% 61.2%
3730011 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.51 38.0 3.10e-01 84.8% 52.9%