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KC460990.1__AGN89471.1__Eta_0025__00025
Bact-VirKC460990.1__AGN89471.1__Eta_0025__00025
Identity
- Accession:
- KC460990 ↗
- Kingdom:
- phage
Quality
94.3
mean pLDDT
Taxonomy
TaxID: 1282995
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-66
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24233.2 best | DUF7446 | 80.9 | 6.70e-23 | 98.4% | 88.6% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1p65A00 | 6.10.140.90 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 34.0 | 3.58e-01 | 93.8% | 68.4% |
| 7oufB01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.53 | 37.0 | 2.90e-01 | 73.4% | 79.2% |
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 37.0 | 3.45e-01 | 95.3% | 57.7% |
| 1uwvA03 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 39.0 | 3.08e-01 | 79.7% | 75.2% |
| 3iujA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.52 | 41.0 | 2.76e-01 | 93.8% | 73.3% |
| 2nutB04 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.52 | 42.0 | 2.91e-01 | 90.6% | 96.2% |
| 4amwA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.51 | 37.0 | 2.42e-01 | 92.2% | 16.0% |
| 1hyhC02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.50 | 41.0 | 3.19e-01 | 93.8% | 61.1% |
| 3cjnA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 38.0 | 3.09e-01 | 89.1% | 75.3% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4999467 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.60 | 50.0 | 3.26e-01 | 95.3% | 86.6% |
| 3891314 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.59 | 40.0 | 2.76e-01 | 70.3% | 45.8% |
| 3276498 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.59 | 49.0 | 3.06e-01 | 95.3% | 34.9% |
| 4939851 | 2003.1.3.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › CoA_transf_3 | 0.55 | 38.0 | 2.42e-01 | 73.4% | 26.1% |
| 3277661 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 32.0 | 2.76e-01 | 84.4% | 33.3% |
| 4186742 | 101.1.2.39 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA | 0.54 | 36.0 | 3.50e-01 | 93.8% | 61.4% |
| 4312097 | 295.1.1.15 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › UPF0128 | 0.54 | 46.0 | 3.46e-01 | 100.0% | 86.3% |
| 5056549 | 375.1.1.204 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PolC_DP2_central | 0.54 | 40.0 | 3.39e-01 | 81.2% | 92.7% |
| 3970048 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.53 | 37.0 | 3.58e-01 | 76.6% | 65.4% |
| 3927894 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.52 | 40.0 | 3.16e-01 | 82.8% | 86.7% |
| 4929239 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.52 | 42.0 | 2.71e-01 | 92.2% | 25.8% |
| 3388135 | 4292.2.1.1 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › FlaG | 0.51 | 36.0 | 3.51e-01 | 76.6% | 69.3% |
| 4983222 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.51 | 42.0 | 2.66e-01 | 93.8% | 25.0% |
| 5068734 | 244.4.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases | 0.51 | 35.0 | 2.75e-01 | 71.9% | 82.9% |