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KC460990.1__AGN89474.1__Eta_0028__00028
Bact-VirKC460990.1__AGN89474.1__Eta_0028__00028
Identity
- Accession:
- KC460990 ↗
- Kingdom:
- phage
Quality
79.1
mean pLDDT
Taxonomy
TaxID: 1282995
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 87-135
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4nrjB01 | 3.90.20.10 | Alpha Beta › Alpha-Beta Complex › Hemagglutinin Ectodomain; Chain B › | 0.75 | 47.0 | 3.23e-01 | 85.7% | 19.9% |
| 3lnrA00 | 1.20.120.1530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.67 | 45.0 | 3.08e-01 | 95.9% | 21.3% |
| 3q23A08 | 1.20.140.110 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.66 | 48.0 | 3.32e-01 | 77.6% | 94.8% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 44.0 | 4.12e-01 | 100.0% | 60.3% |
| 1vzsA01 | 1.10.246.110 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Mitochondrial ATP synthase-coupling factor 6 | 0.64 | 54.0 | 5.01e-01 | 100.0% | 76.2% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 37.0 | 3.67e-01 | 79.6% | 60.0% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.60 | 47.0 | 3.95e-01 | 93.9% | 53.2% |
| 3tbiB02 | 6.10.140.1670 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 50.0 | 3.97e-01 | 93.9% | 53.0% |
| 1rfyB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.59 | 47.0 | 3.86e-01 | 85.7% | 51.1% |
| 6qu3A02 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 49.0 | 3.35e-01 | 98.0% | 85.4% |
| 2kp8A00 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.57 | 46.0 | 4.03e-01 | 87.8% | 59.7% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 46.0 | 4.03e-01 | 93.9% | 62.0% |
| 4at7B02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.55 | 49.0 | 3.28e-01 | 100.0% | 66.5% |
| 1ze0A02 | 1.10.4070.10 | Mainly Alpha › Orthogonal Bundle › putative redox-enzyme maturation protein fold › putative redox-enzyme maturation protein domain | 0.55 | 45.0 | 3.93e-01 | 93.9% | 75.6% |
| 3f1iS00 | 1.20.5.1940 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.54 | 39.0 | 3.40e-01 | 85.7% | 49.4% |
| 2ckzA01 | 6.10.140.870 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 38.0 | 3.92e-01 | 93.9% | 77.1% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.53 | 45.0 | 3.81e-01 | 93.9% | 95.1% |
| 2rhqB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.53 | 48.0 | 3.98e-01 | 100.0% | 68.7% |
| 7x4oB01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 47.0 | 3.60e-01 | 100.0% | 47.7% |
| 3rv0C02 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.52 | 46.0 | 3.31e-01 | 100.0% | 61.1% |
| 4grfA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 40.0 | 3.01e-01 | 89.8% | 62.9% |
| 4dbgB01 | 6.10.140.1100 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 31.0 | 3.15e-01 | 77.6% | 57.4% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3462746 | 109.4.1.360 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Spatacsin_C | 0.64 | 48.0 | 2.89e-01 | 93.9% | 13.0% |
| 1124212 | 3790.1.1.1 ↗ | alpha duplicates or obligate multimers › N-terminal domain of effector protein LegC3 › N-terminal domain of effector protein LegC3 › N-terminal domain of effector protein LegC3 › LegC3_N | 0.63 | 52.0 | 3.93e-01 | 100.0% | 37.2% |
| 4857394 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.62 | 52.0 | 3.89e-01 | 95.9% | 64.5% |
| 3970936 | 4168.1.1.1 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › HAMP | 0.61 | 46.0 | 4.16e-01 | 79.6% | 72.3% |
| 4061047 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.61 | 48.0 | 3.49e-01 | 91.8% | 49.3% |
| 4123079 | 4168.1.1.0 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain | 0.59 | 48.0 | 4.62e-01 | 91.8% | 76.4% |
| 3808217 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.59 | 45.0 | 3.34e-01 | 100.0% | 33.3% |
| 3281989 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.59 | 51.0 | 3.25e-01 | 100.0% | 63.4% |
| 3191120 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.59 | 51.0 | 3.45e-01 | 100.0% | 84.1% |
| 4517683 | 4168.1.1.0 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain | 0.58 | 44.0 | 4.25e-01 | 91.8% | 72.7% |
| 4109480 | 4168.1.1.0 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain | 0.58 | 39.0 | 3.97e-01 | 85.7% | 70.0% |
| 3402108 | 108.2.1.2 ↗ | alpha arrays › EF-hand › Insect pheromone/odorant-binding proteins › Insect pheromone/odorant-binding proteins › OBP47_like | 0.57 | 50.0 | 3.56e-01 | 100.0% | 34.7% |
| 3410408 | 3712.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 | 0.57 | 45.0 | 3.74e-01 | 85.7% | 50.0% |
| 5033692 | 4168.1.1.0 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain | 0.57 | 46.0 | 3.88e-01 | 87.8% | 53.8% |
| 3937187 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.56 | 46.0 | 3.51e-01 | 89.8% | 79.1% |
| 3639372 | 109.4.1.2838 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps53_N, Sec6, VPS53_C | 0.55 | 46.0 | 2.61e-01 | 95.9% | 7.4% |
| 3832267 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.55 | 47.0 | 3.67e-01 | 93.9% | 52.0% |
| 3720780 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 45.0 | 2.75e-01 | 89.8% | 15.2% |
| 3873823 | 316.1.1.16 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DZF_N | 0.54 | 48.0 | 3.16e-01 | 100.0% | 60.0% |
| 3257603 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.54 | 48.0 | 3.59e-01 | 100.0% | 40.8% |
| 4021491 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.52 | 44.0 | 3.04e-01 | 98.0% | 45.0% |