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KC462197.1__AGK86806.1__ST79_048__00047
Bact-VirKC462197.1__AGK86806.1__ST79_048__00047
Identity
- Accession:
- KC462197 ↗
- Kingdom:
- phage
Quality
86.7
mean pLDDT
Taxonomy
TaxID: 1282994
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-75
Domain cluster:
rep: NC_070910.1__YP_010664019.1__PQA62_gp01__00001__D6-61
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2no4A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.74 | 53.0 | 5.29e-01 | 75.0% | 80.0% |
| 2z8fB02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.67 | 42.0 | 2.97e-01 | 77.8% | 19.6% |
| 2x3mA00 | 1.25.40.670 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.65 | 61.0 | 4.52e-01 | 100.0% | 80.1% |
| 4p63D00 | 3.40.910.10 | Alpha Beta › 3-Layer(aba) Sandwich › Deoxyhypusine Synthase › Deoxyhypusine synthase | 0.63 | 47.0 | 3.14e-01 | 100.0% | 18.9% |
| 2fozA00 | 1.10.4080.10 | Mainly Alpha › Orthogonal Bundle › ADP-ribosylglycohydrolase fold › ADP-ribosylation/Crystallin J1 | 0.62 | 52.0 | 3.39e-01 | 94.4% | 46.6% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 53.0 | 4.34e-01 | 98.6% | 57.9% |
| 3pqaB01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.59 | 46.0 | 3.07e-01 | 81.9% | 79.4% |
| 2xmoA02 | 1.10.246.180 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.59 | 52.0 | 4.91e-01 | 98.6% | 88.4% |
| 1gq2A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 49.0 | 3.31e-01 | 95.8% | 44.7% |
| 4ebjA02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.59 | 43.0 | 3.62e-01 | 80.6% | 98.5% |
| 2rinA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.58 | 44.0 | 3.34e-01 | 81.9% | 34.8% |
| 4fx5A03 | 1.20.120.1690 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.57 | 43.0 | 3.83e-01 | 79.2% | 58.0% |
| 3rh9A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.57 | 44.0 | 2.97e-01 | 84.7% | 74.7% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 48.0 | 4.38e-01 | 93.1% | 73.2% |
| 5jbrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 47.0 | 4.47e-01 | 94.4% | 100.0% |
| 5j6bD01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.56 | 43.0 | 2.92e-01 | 84.7% | 75.6% |
| 3q4oA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.56 | 48.0 | 3.77e-01 | 100.0% | 96.4% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.56 | 48.0 | 4.23e-01 | 95.8% | 73.6% |
| 6fjxA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.56 | 48.0 | 3.32e-01 | 100.0% | 83.4% |
| 2w0gA00 | 1.20.58.610 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain | 0.55 | 38.0 | 3.20e-01 | 72.2% | 86.8% |
| 1e9fA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 42.0 | 3.15e-01 | 84.7% | 42.6% |
| 1euhA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.55 | 43.0 | 2.90e-01 | 84.7% | 75.5% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.55 | 42.0 | 4.02e-01 | 83.3% | 95.4% |
| 1t11A02 | 1.10.3120.10 | Mainly Alpha › Orthogonal Bundle › Trigger factor, domain 2 › Trigger factor, C-terminal domain | 0.55 | 46.0 | 3.63e-01 | 97.2% | 84.9% |
| 1t90A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.55 | 47.0 | 3.20e-01 | 98.6% | 90.7% |
| 5ekcF01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.54 | 46.0 | 3.19e-01 | 100.0% | 81.2% |
| 3ju8A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.54 | 42.0 | 2.81e-01 | 84.7% | 70.0% |
| 2kmfA01 | 1.20.58.810 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 | 0.54 | 46.0 | 4.09e-01 | 94.4% | 72.5% |
| 3tm8B00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.54 | 43.0 | 2.87e-01 | 88.9% | 87.6% |
| 1ez0B01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.53 | 45.0 | 2.98e-01 | 95.8% | 54.2% |
| 2j6lA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.53 | 44.0 | 3.02e-01 | 97.2% | 87.0% |
| 4zqeA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.53 | 46.0 | 4.15e-01 | 95.8% | 84.4% |
| 3w1hA01 | 3.90.1150.110 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.53 | 42.0 | 3.12e-01 | 100.0% | 33.3% |
| 3d2fA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.53 | 43.0 | 4.12e-01 | 95.8% | 77.4% |
| 4agsB04 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 46.0 | 3.78e-01 | 100.0% | 70.7% |
| 3nufB00 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.52 | 45.0 | 3.87e-01 | 97.2% | 79.5% |
| 4i8qA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 42.0 | 2.94e-01 | 100.0% | 78.1% |
| 1uxtA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 45.0 | 3.05e-01 | 98.6% | 56.0% |
| 3r64A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 44.0 | 2.94e-01 | 97.2% | 64.6% |
| 2hg2A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 42.0 | 2.95e-01 | 100.0% | 80.4% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4271716 | 101.28.1.1 ↗ | alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins › FlhC | 0.80 | 56.0 | 5.32e-01 | 73.6% | 64.7% |
| 4990947 | 7014.1.1.2 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE | 0.76 | 49.0 | 4.11e-01 | 94.4% | 40.9% |
| 3165263 | 3236.1.1.1 ↗ | alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_Exchanger | 0.73 | 64.0 | 3.94e-01 | 94.4% | 70.6% |
| 4954814 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.70 | 54.0 | 3.43e-01 | 81.9% | 34.0% |
| 5039496 | 101.1.2.914 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6015 | 0.69 | 52.0 | 4.79e-01 | 93.1% | 63.3% |
| 5050227 | 7014.1.1.2 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE | 0.67 | 51.0 | 4.52e-01 | 95.8% | 57.0% |
| 5031192 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.65 | 52.0 | 4.79e-01 | 98.6% | 67.8% |
| 147066 | 3275.1.1.1 ↗ | alpha complex topology › Hypothetical protein ORF239 › Hypothetical protein ORF239 › Hypothetical protein ORF239 › ORF239-like | 0.65 | 61.0 | 4.52e-01 | 100.0% | 80.1% |
| 3605109 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.61 | 53.0 | 4.13e-01 | 95.8% | 52.3% |
| 3211803 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.61 | 54.0 | 4.90e-01 | 95.8% | 76.8% |
| 3260740 | 103.4.1.2 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › TFIIS_M | 0.61 | 55.0 | 5.10e-01 | 98.6% | 87.8% |
| 5080068 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.60 | 55.0 | 4.83e-01 | 97.2% | 89.0% |
| 5004343 | 2498.5.1.0 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like | 0.60 | 52.0 | 4.72e-01 | 100.0% | 70.5% |
| 3416362 | 246.2.1.5 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos,ASMase_C | 0.59 | 49.0 | 2.89e-01 | 91.7% | 57.1% |
| 3817816 | 142.3.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Mitochondrial morphogenesis protein Sld7 C-terminal domain › Mitochondrial morphogenesis protein Sld7 C-terminal domain | 0.59 | 51.0 | 4.36e-01 | 93.1% | 100.0% |
| 1833085 | 601.7.1.10 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Ant-IIb_sub-bd | 0.59 | 43.0 | 3.62e-01 | 80.6% | 98.5% |
| 1174795 | 3650.1.1.1 ↗ | alpha arrays › C-terminal domain of Lmo2642 protein › C-terminal domain of Lmo2642 protein › C-terminal domain of Lmo2642 protein › CNP_C_terminal | 0.58 | 51.0 | 4.39e-01 | 98.6% | 64.6% |
| 4203030 | 3352.1.1.9 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › Mannosyl_trans | 0.57 | 52.0 | 3.34e-01 | 100.0% | 72.6% |
| 3583636 | 246.2.1.5 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos,ASMase_C | 0.57 | 51.0 | 3.01e-01 | 98.6% | 59.4% |
| 3255346 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.55 | 45.0 | 3.81e-01 | 94.4% | 66.9% |
| 3969091 | 109.4.1.203 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 42.0 | 3.14e-01 | 83.3% | 35.7% |
| 3241490 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.54 | 45.0 | 4.01e-01 | 95.8% | 69.1% |
| 4063794 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.54 | 45.0 | 3.95e-01 | 93.1% | 90.9% |
| 3650365 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.53 | 46.0 | 4.23e-01 | 95.8% | 72.6% |
| 4069480 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.53 | 43.0 | 3.76e-01 | 90.3% | 74.5% |
| 4949603 | 3718.1.1.34 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › PF26161 | 0.53 | 44.0 | 4.26e-01 | 100.0% | 82.4% |
| 4224947 | 166.1.1.1 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C | 0.52 | 45.0 | 4.00e-01 | 97.2% | 69.5% |
| 3987421 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.52 | 39.0 | 4.05e-01 | 100.0% | 93.8% |