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KC465899.1__AGE60386.1__X__00052
Bact-VirKC465899.1__AGE60386.1__X__00052
Identity
- Accession:
- KC465899 ↗
- Kingdom:
- phage
Quality
97.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Pelagibacter_phage_HTVC008M
TaxID: 1283076
Cluster
View cluster (12 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-93
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jivD00 | 2.60.200.60 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.84 | 77.0 | 7.74e-01 | 97.8% | 94.6% |
| 4ku0D00 | 2.60.200.60 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.81 | 74.0 | 7.39e-01 | 97.8% | 93.8% |
| 2lwyA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.60 | 35.0 | 3.03e-01 | 93.5% | 37.7% |
| 2w5eA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 32.0 | 3.48e-01 | 94.6% | 63.5% |
| 4bi3A01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.58 | 33.0 | 3.33e-01 | 97.8% | 54.9% |
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.57 | 32.0 | 3.93e-01 | 95.7% | 100.0% |
| 2ou5A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 38.0 | 3.19e-01 | 75.3% | 96.6% |
| 5dvhA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 46.0 | 3.76e-01 | 98.9% | 96.8% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.52 | 36.0 | 3.62e-01 | 97.8% | 71.0% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 32.0 | 3.50e-01 | 93.5% | 78.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5056459 | 3174.3.1.1 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › PAAR_motif | 0.94 | 64.0 | 7.70e-01 | 79.6% | 100.0% |
| 4957571 | 3174.3.1.1 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › PAAR_motif | 0.89 | 84.0 | 7.35e-01 | 100.0% | 96.9% |
| 3948150 | 3174.3.1.1 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › PAAR_motif | 0.86 | 69.0 | 7.43e-01 | 98.9% | 97.5% |
| 5059112 | 3174.3.1.1 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › PAAR_motif | 0.85 | 77.0 | 7.75e-01 | 94.6% | 93.6% |
| 3972966 | 3174.3.1.0 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein | 0.85 | 79.0 | 6.77e-01 | 100.0% | 98.6% |
| 1088866 | 3174.3.1.1 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › PAAR_motif | 0.84 | 77.0 | 7.74e-01 | 97.8% | 94.6% |
| 3949323 | 3174.3.1.1 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › PAAR_motif | 0.84 | 71.0 | 7.46e-01 | 100.0% | 96.5% |
| 1292784 | 3174.3.1.1 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › PAAR_motif | 0.81 | 74.0 | 7.39e-01 | 97.8% | 93.8% |
| 2631812 | 3174.3.1.0 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein | 0.81 | 69.0 | 7.16e-01 | 97.8% | 95.4% |
| 3966552 | 3174.3.1.1 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › PAAR_motif | 0.81 | 78.0 | 7.40e-01 | 100.0% | 89.5% |
| 4938445 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.52 | 33.0 | 2.99e-01 | 98.9% | 44.4% |