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KC481682.1__AGI11920.1__X__00108
Bact-VirKC481682.1__AGI11920.1__X__00108
Identity
- Accession:
- KC481682 ↗
- Kingdom:
- phage
Quality
95.8
mean pLDDT
Taxonomy
TaxID: 1308863
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-74
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3o2pE00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 59.0 | 5.52e-01 | 98.6% | 65.1% |
| 3dplC03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 56.0 | 5.40e-01 | 98.6% | 67.5% |
| 5k7fA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 39.0 | 4.98e-01 | 84.7% | 100.0% |
| 1q1vA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 50.0 | 5.15e-01 | 98.6% | 82.9% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.67 | 46.0 | 4.20e-01 | 100.0% | 52.6% |
| 3e3vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 43.0 | 4.78e-01 | 98.6% | 96.2% |
| 3sykA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 37.0 | 3.48e-01 | 77.8% | 47.8% |
| 3ckdA02 | 1.20.58.360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines | 0.61 | 48.0 | 4.05e-01 | 86.1% | 89.5% |
| 7smgD00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.61 | 44.0 | 3.60e-01 | 77.8% | 72.5% |
| 7xuxB01 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.59 | 50.0 | 3.55e-01 | 98.6% | 63.2% |
| 2fe3B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 51.0 | 4.82e-01 | 100.0% | 81.2% |
| 4akgA14 | 1.20.1280.160 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.56 | 47.0 | 4.16e-01 | 95.8% | 96.3% |
| 4g12A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 39.0 | 3.14e-01 | 75.0% | 84.6% |
| 4mtdD01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 46.0 | 4.34e-01 | 98.6% | 77.3% |
| 2hoqA02 | 1.10.150.520 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.54 | 41.0 | 4.04e-01 | 100.0% | 77.2% |
| 1zymA02 | 1.10.274.10 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain | 0.54 | 46.0 | 3.92e-01 | 100.0% | 57.1% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 37.0 | 3.71e-01 | 75.0% | 98.7% |
| 3d6jA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 39.0 | 4.01e-01 | 94.4% | 85.1% |
| 1n00A03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.53 | 35.0 | 3.51e-01 | 100.0% | 65.8% |
| 4flaC00 | 6.10.250.2560 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.53 | 36.0 | 3.07e-01 | 95.8% | 40.9% |
| 4l7nA01 | 1.20.142.10 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain | 0.52 | 44.0 | 3.58e-01 | 98.6% | 72.0% |
| 2kjgA00 | 1.20.120.970 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.52 | 41.0 | 3.74e-01 | 97.2% | 65.7% |
| 4wr4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 36.0 | 3.23e-01 | 87.5% | 51.4% |
| 2qq8A02 | 1.10.8.270 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › putative rabgap domain of human tbc1 domain family member 14 like domains | 0.51 | 38.0 | 3.55e-01 | 83.3% | 86.5% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 43.0 | 4.27e-01 | 100.0% | 97.3% |
| 4i0xG00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.50 | 37.0 | 3.82e-01 | 91.7% | 85.3% |
| 7r97A01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.50 | 40.0 | 3.18e-01 | 87.5% | 54.7% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4600617 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.81 | 56.0 | 4.38e-01 | 97.2% | 34.7% |
| 4943135 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.69 | 47.0 | 3.63e-01 | 100.0% | 31.9% |
| 3548337 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 58.0 | 5.09e-01 | 100.0% | 82.9% |
| 1519439 | 3009.1.1.0 ↗ | alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like | 0.62 | 40.0 | 4.15e-01 | 83.3% | 70.8% |
| 3661129 | 197.1.1.3 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › ACBP | 0.62 | 40.0 | 3.59e-01 | 100.0% | 45.7% |
| 3983569 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.61 | 55.0 | 4.24e-01 | 100.0% | 45.6% |
| 4999997 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.60 | 41.0 | 3.82e-01 | 98.6% | 54.7% |
| 3816635 | 219.1.1.79 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core2 | 0.59 | 47.0 | 3.80e-01 | 90.3% | 54.0% |
| 3547029 | 148.1.3.221 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › NPHP3_hel | 0.58 | 32.0 | 3.08e-01 | 76.4% | 45.9% |
| 3168505 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.58 | 40.0 | 3.70e-01 | 72.2% | 60.0% |
| 3770218 | 101.1.4.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou | 0.57 | 39.0 | 3.52e-01 | 70.8% | 71.8% |
| 3377582 | 632.21.1.4 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Helical bundle domain in endo-beta-N-acetylglucosaminidase F2 › Helical bundle domain in endo-beta-N-acetylglucosaminidase F2 › GAUT_1 | 0.57 | 38.0 | 3.53e-01 | 94.4% | 52.6% |
| 3781173 | 101.1.2.73 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82 | 0.56 | 48.0 | 3.97e-01 | 98.6% | 83.7% |
| 3798194 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 49.0 | 4.55e-01 | 100.0% | 95.6% |
| 3692363 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.54 | 37.0 | 3.22e-01 | 72.2% | 45.5% |
| 3991846 | 108.1.1.14 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF_assoc_2 | 0.53 | 36.0 | 3.37e-01 | 81.9% | 54.7% |
| 3469591 | 109.4.1.450 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF247 | 0.53 | 39.0 | 2.57e-01 | 80.6% | 36.0% |
| 4960793 | 148.1.3.26 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_9 | 0.52 | 38.0 | 3.40e-01 | 77.8% | 54.3% |
| 4235509 | 246.2.1.14 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › FBPase_2 | 0.52 | 44.0 | 2.76e-01 | 95.8% | 91.3% |
| 4078112 | 592.1.1.1 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI | 0.52 | 41.0 | 4.06e-01 | 100.0% | 82.3% |
| 3659356 | 4266.1.1.1 ↗ | alpha bundles › Hyaluronidase domain-like › Hyaluronidase post-catalytic domain-like › Hyaluronidase post-catalytic domain-like › NAGLU_C | 0.51 | 44.0 | 2.99e-01 | 100.0% | 67.8% |
| 3577643 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.50 | 42.0 | 4.16e-01 | 97.2% | 87.5% |