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KC542353.1__AGR46545.1__TW1_029__00029

Bact-Vir

KC542353.1__AGR46545.1__TW1_029__00029

Identity

Accession:
KC542353 ↗
Kingdom:
phage

Quality

88.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 103-150
PDB
Domain cluster: representative
CATH (76)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 77.0 6.38e-01 95.8% 62.5%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 66.0 5.43e-01 81.2% 52.5%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 75.0 5.70e-01 95.8% 47.6%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 67.0 6.10e-01 83.3% 72.1%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.84 69.0 4.79e-01 87.5% 86.5%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 66.0 5.62e-01 83.3% 59.7%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 72.0 6.48e-01 97.9% 84.6%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.82 64.0 4.09e-01 83.3% 20.9%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 65.0 6.03e-01 85.4% 81.7%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 69.0 6.31e-01 93.8% 84.1%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 62.0 4.97e-01 81.2% 47.2%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 64.0 5.97e-01 83.3% 74.1%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.81 61.0 4.40e-01 81.2% 34.4%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 63.0 5.19e-01 83.3% 52.4%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 61.0 5.81e-01 81.2% 69.6%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 62.0 5.82e-01 83.3% 69.0%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 62.0 5.89e-01 83.3% 76.8%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 62.0 5.28e-01 83.3% 57.3%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 65.0 5.28e-01 89.6% 52.9%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 61.0 5.17e-01 83.3% 56.6%
2xkoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 60.0 4.69e-01 81.2% 56.4%
1biaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 59.0 5.34e-01 81.2% 64.1%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 59.0 4.97e-01 81.2% 59.0%
1o57A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 62.0 5.40e-01 87.5% 63.9%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 58.0 5.08e-01 81.2% 63.4%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 59.0 4.77e-01 81.2% 62.8%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 6.09e-01 87.5% 82.7%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 5.94e-01 87.5% 78.2%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 6.15e-01 87.5% 88.0%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 57.0 4.69e-01 81.2% 48.3%
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 59.0 4.87e-01 81.2% 64.2%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 5.60e-01 87.5% 93.7%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 5.90e-01 87.5% 83.3%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 56.0 4.92e-01 81.2% 63.4%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 60.0 5.98e-01 87.5% 86.0%
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 55.0 5.26e-01 81.2% 70.7%
1u2wD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 52.0 4.11e-01 72.9% 45.7%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 55.0 5.09e-01 81.2% 63.5%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 56.0 5.11e-01 81.2% 64.1%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 5.70e-01 87.5% 79.6%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 53.0 5.23e-01 77.1% 74.5%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 55.0 4.43e-01 81.2% 43.0%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 56.0 5.66e-01 83.3% 83.3%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 54.0 5.07e-01 81.2% 67.2%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 55.0 4.93e-01 81.2% 61.2%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 55.0 4.53e-01 83.3% 44.4%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 54.0 4.96e-01 81.2% 65.1%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 51.0 4.93e-01 75.0% 80.0%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 57.0 4.16e-01 87.5% 45.0%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 4.75e-01 87.5% 76.2%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 53.0 4.84e-01 81.2% 60.6%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 53.0 4.80e-01 81.2% 78.8%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 53.0 4.68e-01 81.2% 66.2%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 53.0 4.53e-01 81.2% 69.2%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 53.0 4.33e-01 81.2% 44.9%
3nrvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 4.11e-01 87.5% 40.3%
3i71B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 48.0 4.52e-01 70.8% 58.6%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.71 59.0 4.84e-01 97.9% 53.2%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 63.0 5.43e-01 100.0% 92.0%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 55.0 5.09e-01 87.5% 82.5%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 57.0 5.10e-01 93.8% 67.6%
2hr3D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 52.0 4.84e-01 81.2% 67.7%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 54.0 3.92e-01 87.5% 43.3%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 55.0 4.00e-01 87.5% 40.2%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 63.0 5.11e-01 100.0% 92.9%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 53.0 4.00e-01 85.4% 83.3%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 50.0 4.09e-01 81.2% 43.6%
3hhgE01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 57.0 4.77e-01 100.0% 98.9%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 4.47e-01 87.5% 81.2%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 57.0 4.47e-01 100.0% 71.2%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 48.0 4.49e-01 81.2% 68.9%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 54.0 4.31e-01 100.0% 87.8%
2zkzC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 45.0 3.85e-01 81.2% 46.0%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 51.0 4.12e-01 100.0% 92.3%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 45.0 3.44e-01 85.4% 52.0%
1ho8A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.59 49.0 2.99e-01 93.8% 25.7%
ECOD (94)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4585396 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.92 86.0 5.72e-01 100.0% 33.8%
4148347 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.90 80.0 6.02e-01 95.8% 48.1%
3978620 101.1.1.30 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.87 80.0 5.31e-01 97.9% 33.3%
4031116 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 64.0 5.84e-01 77.1% 66.7%
4303963 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 79.0 6.69e-01 100.0% 69.3%
3090474 4020.1.1.0 a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes 0.86 77.0 5.46e-01 100.0% 37.0%
3886097 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 68.0 5.82e-01 87.5% 98.7%
3452698 101.1.10.37 alpha arrays › HTH › HTH › Cyclin-like › PF26138 0.85 71.0 5.58e-01 91.7% 95.8%
3588551 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.85 71.0 6.55e-01 91.7% 73.3%
3974013 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 66.0 6.09e-01 83.3% 71.7%
4944726 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 74.0 6.83e-01 95.8% 83.3%
4031535 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.84 69.0 6.37e-01 89.6% 78.3%
3693312 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 67.0 6.20e-01 87.5% 80.0%
4034200 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.83 68.0 6.06e-01 87.5% 76.9%
4139052 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 68.0 5.74e-01 87.5% 66.7%
3191582 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.83 74.0 5.36e-01 100.0% 40.8%
3290024 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 64.0 5.30e-01 83.3% 50.0%
4010472 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.82 62.0 6.17e-01 81.2% 82.0%
3452676 101.1.1.267 alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.81 70.0 5.62e-01 97.9% 98.9%
4990647 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 57.0 5.50e-01 75.0% 70.9%
3880943 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 71.0 5.57e-01 95.8% 75.8%
4926890 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.81 61.0 4.90e-01 81.2% 46.7%
3383803 101.1.3.12 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF26138 0.81 68.0 5.38e-01 95.8% 84.0%
4458444 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.80 68.0 5.45e-01 95.8% 56.8%
4349614 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.80 72.0 6.91e-01 100.0% 90.9%
3589184 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 55.0 4.72e-01 72.9% 49.3%
3942695 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.80 61.0 5.53e-01 83.3% 61.5%
3947063 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.80 56.0 5.60e-01 79.2% 72.0%
4309654 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.79 58.0 5.59e-01 79.2% 70.9%
4956784 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.79 59.0 5.21e-01 81.2% 58.6%
5010215 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.79 59.0 5.51e-01 81.2% 68.3%
5020571 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.78 59.0 4.53e-01 81.2% 37.1%
3943462 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 63.0 6.06e-01 89.6% 83.6%
5060508 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 54.0 5.81e-01 72.9% 92.5%
4977346 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 58.0 5.80e-01 81.2% 84.0%
5056682 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 65.0 5.74e-01 93.8% 68.6%
5052610 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.77 62.0 5.74e-01 87.5% 71.7%
3959624 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 62.0 6.15e-01 87.5% 86.0%
5030780 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.77 59.0 5.83e-01 85.4% 82.0%
5013090 304.4.1.83 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › HTH_24 0.77 62.0 4.11e-01 87.5% 23.9%
4968115 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 57.0 5.07e-01 81.2% 58.6%
3989048 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.76 57.0 4.00e-01 81.2% 26.7%
5070623 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.76 62.0 6.16e-01 95.8% 88.0%
4047135 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.76 62.0 6.14e-01 87.5% 86.0%
5056141 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.76 62.0 5.89e-01 87.5% 78.2%
3589364 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.76 58.0 4.17e-01 81.2% 30.4%
4928836 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.75 60.0 5.31e-01 87.5% 61.4%
5040558 101.1.2.162 alpha arrays › HTH › HTH › winged helix domain › DprA_WH 0.75 60.0 5.20e-01 89.6% 56.0%
5053135 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 56.0 5.29e-01 85.4% 65.0%
5083541 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 61.0 5.47e-01 87.5% 70.8%
5062037 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.75 56.0 5.57e-01 81.2% 80.0%
5054273 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 56.0 4.00e-01 81.2% 28.3%
3423772 4964.1.1.1 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.75 55.0 4.20e-01 81.2% 55.7%
4947441 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 56.0 4.61e-01 81.2% 47.1%
3963899 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.74 55.0 4.58e-01 81.2% 54.1%
4002185 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.73 55.0 4.74e-01 85.4% 52.0%
5004061 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.73 59.0 5.32e-01 87.5% 81.2%
5031411 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.73 54.0 4.59e-01 81.2% 50.0%
3587739 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.73 58.0 5.17e-01 89.6% 68.6%
5052142 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 54.0 5.52e-01 81.2% 86.7%
4986012 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.72 54.0 3.52e-01 81.2% 19.0%
3951676 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.72 54.0 4.24e-01 81.2% 46.0%
4980944 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 53.0 4.54e-01 81.2% 51.2%
4131872 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 51.0 4.90e-01 75.0% 80.0%
5059633 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.72 53.0 5.10e-01 81.2% 72.7%
3986350 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.71 56.0 5.54e-01 85.4% 88.0%
3767621 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.71 56.0 4.69e-01 85.4% 51.2%
3590374 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.71 50.0 4.82e-01 75.0% 78.2%
3953807 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.71 59.0 4.09e-01 93.8% 30.3%
5073990 101.1.1.540 alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.71 59.0 5.24e-01 100.0% 74.7%
4931071 101.1.2.21 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.71 56.0 3.99e-01 87.5% 40.7%
4952035 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.71 50.0 4.68e-01 72.9% 58.3%
5074939 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.71 53.0 5.07e-01 81.2% 70.9%
4948953 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.70 56.0 5.04e-01 87.5% 87.7%
5020805 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.70 52.0 4.13e-01 81.2% 40.0%
5044632 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 52.0 4.85e-01 81.2% 65.0%
4061597 101.1.6.1 alpha arrays › HTH › HTH › TrpR › Trp_repressor 0.69 51.0 4.31e-01 83.3% 50.6%
3753093 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.68 57.0 5.18e-01 93.8% 70.8%
370599 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.68 53.0 3.82e-01 87.5% 42.0%
4968035 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.68 50.0 4.06e-01 81.2% 48.0%
5031872 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 50.0 4.73e-01 81.2% 70.0%
4002905 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 57.0 5.23e-01 100.0% 81.5%
5027877 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.67 53.0 4.49e-01 87.5% 76.2%
3991300 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 61.0 5.05e-01 100.0% 96.2%
4993585 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 56.0 5.13e-01 91.7% 88.3%
4979789 101.1.2.78 alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.66 48.0 4.66e-01 81.2% 69.1%
4929096 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.66 52.0 4.19e-01 87.5% 61.1%
4994911 101.1.2.222 alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N 0.65 51.0 4.47e-01 87.5% 70.7%
4303638 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.64 50.0 4.37e-01 87.5% 70.7%
5072326 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.64 56.0 4.17e-01 100.0% 54.4%
4540842 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.63 56.0 3.75e-01 97.9% 34.1%
4984935 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 55.0 3.55e-01 100.0% 58.6%
5032748 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.62 48.0 4.25e-01 87.5% 80.0%
5017584 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 55.0 4.36e-01 100.0% 95.8%
D2 medium residues 1-54
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jrmA00 1.10.10.620 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ribosome modulation factor like domain 0.81 63.0 6.09e-01 87.0% 75.0%
2d3dA00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.63 47.0 4.15e-01 81.5% 92.8%
6me6B02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.63 45.0 2.89e-01 77.8% 28.6%
6hxlB01 1.10.230.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 0.60 50.0 4.01e-01 100.0% 99.2%
1cg5B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.59 43.0 3.30e-01 83.3% 51.1%
4mk3A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.58 47.0 3.63e-01 87.0% 69.6%
3unoE00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.58 43.0 3.13e-01 81.5% 85.6%
5ayvA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.58 45.0 3.54e-01 90.7% 58.4%
1v8bA01 3.40.50.1480 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Adenosylhomocysteinase-like 0.57 48.0 3.05e-01 100.0% 17.5%
3pvlA03 1.20.80.10 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.57 45.0 3.62e-01 92.6% 51.7%
4gltA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.57 45.0 3.55e-01 87.0% 69.3%
2uyyA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.56 48.0 3.79e-01 100.0% 82.1%
2o57A01 1.10.287.840 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mycolic acid cyclopropane synthase domain like 0.56 45.0 3.67e-01 90.7% 88.6%
3g0oA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.56 49.0 3.80e-01 100.0% 83.5%
2jnsA01 1.20.1270.220 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.55 44.0 3.89e-01 88.9% 90.1%
6yz2A01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.55 42.0 3.36e-01 87.0% 65.8%
2gxaE01 1.10.10.510 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain 0.55 40.0 3.78e-01 85.2% 80.8%
3uonA01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.55 38.0 2.52e-01 77.8% 29.7%
3ne5B04 6.10.140.730 Special › Helix non-globular › Helix Hairpins › 0.54 43.0 4.44e-01 98.1% 96.1%
5zzjA02 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.53 42.0 2.79e-01 98.1% 52.6%
2m7bA00 1.10.10.1920 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.53 39.0 3.57e-01 83.3% 87.0%
1vjxA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.52 40.0 2.90e-01 83.3% 81.2%
1n1fA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.52 43.0 3.23e-01 100.0% 63.4%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4407662 6028.1.1.1 alpha bundles › Ribosome modulation factor › Ribosome modulation factor › Ribosome modulation factor › RMF 0.83 73.0 7.02e-01 94.4% 96.7%
3542362 389.1.1.127 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › ANATO 0.78 63.0 6.56e-01 87.0% 94.0%
4392311 101.35.1.1 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 0.69 50.0 5.34e-01 77.8% 100.0%
4992293 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.67 52.0 3.51e-01 87.0% 34.0%
4438504 7000.1.1.0 alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.65 53.0 5.12e-01 96.3% 95.4%
4024626 545.1.2.2 alpha bundles › Gametocyte protein Pfg27-related › Gametocyte protein Pfg27-related › Sporozoite protein UIS3 soluble domain › ETRAMP 0.63 47.0 3.56e-01 81.5% 49.0%
4165646 7000.1.1.0 alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.62 52.0 5.23e-01 96.3% 94.5%
3920862 101.1.1.221 alpha arrays › HTH › HTH › Three-helical HTH › CCDC106 0.62 46.0 4.76e-01 100.0% 88.0%
5058272 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.61 47.0 5.01e-01 83.3% 100.0%
4531960 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.61 48.0 3.10e-01 92.6% 23.9%
3232885 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 45.0 2.84e-01 85.2% 25.0%
4944123 5060.2.1.1 alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF 0.60 52.0 3.97e-01 100.0% 73.8%
3250170 3614.1.1.0 alpha arrays › T4 RNA ligase › T4 RNA ligase › T4 RNA ligase (Rnl1) C-terminal domain 0.59 50.0 3.80e-01 100.0% 40.7%
3505559 101.1.6.19 alpha arrays › HTH › HTH › TrpR › PAX 0.59 48.0 4.37e-01 100.0% 66.7%
3504312 604.5.1.0 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.58 41.0 3.36e-01 74.1% 75.0%
3958088 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.58 47.0 3.22e-01 88.9% 43.1%
3958271 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.58 49.0 3.40e-01 100.0% 80.0%
1914530 109.4.1.270 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RYDR_Jsol 0.57 43.0 3.05e-01 87.0% 33.3%
3970884 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.56 46.0 3.94e-01 98.1% 66.3%
4020549 197.1.1.3 alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › ACBP 0.56 45.0 3.86e-01 96.3% 62.0%
3702178 129.1.1.16 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_binding_11 0.56 46.0 3.55e-01 92.6% 87.2%
4469646 4246.1.1.2 a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 0.54 43.0 2.69e-01 88.9% 29.2%
5005386 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.51 44.0 2.99e-01 100.0% 75.6%
3508526 180.1.1.6 alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › FIT 0.51 41.0 2.79e-01 100.0% 82.9%
D3 medium residues 57-92
PDB
Domain cluster: representative
CATH (83)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3frwB00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.99 92.0 6.47e-01 100.0% 37.5%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.92 80.0 5.74e-01 100.0% 36.6%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.88 75.0 6.60e-01 100.0% 65.5%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.85 71.0 4.25e-01 100.0% 14.5%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.85 71.0 6.47e-01 100.0% 70.6%
4jp0A03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 69.0 7.02e-01 97.2% 100.0%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 68.0 6.11e-01 97.2% 64.8%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 69.0 5.79e-01 100.0% 54.5%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.83 69.0 6.12e-01 100.0% 64.3%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 70.0 6.38e-01 100.0% 72.9%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 67.0 6.40e-01 100.0% 82.2%
1a9xA04 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.82 67.0 4.49e-01 100.0% 24.0%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.81 67.0 5.04e-01 100.0% 44.7%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.81 65.0 4.55e-01 100.0% 30.2%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.80 69.0 4.89e-01 100.0% 36.7%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 65.0 5.19e-01 100.0% 47.5%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 65.0 5.26e-01 100.0% 48.7%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 5.45e-01 100.0% 54.2%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 63.0 6.06e-01 100.0% 86.4%
6oinA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 68.0 5.56e-01 100.0% 59.7%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 5.37e-01 100.0% 71.6%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.78 65.0 4.49e-01 100.0% 29.0%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.78 65.0 4.83e-01 97.2% 41.5%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 5.43e-01 100.0% 63.9%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 65.0 5.15e-01 100.0% 50.0%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.77 62.0 4.62e-01 100.0% 40.8%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 61.0 5.26e-01 100.0% 60.0%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 4.50e-01 94.4% 35.2%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.77 61.0 5.20e-01 100.0% 55.9%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 60.0 5.27e-01 100.0% 60.3%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.77 64.0 4.04e-01 100.0% 17.5%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.76 62.0 5.83e-01 97.2% 80.4%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 5.61e-01 100.0% 82.8%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.76 62.0 4.19e-01 97.2% 26.8%
4gqmA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 56.0 4.05e-01 83.3% 30.5%
4xviA01 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.76 61.0 4.17e-01 100.0% 27.8%
2w48B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 62.0 5.62e-01 97.2% 76.9%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 5.12e-01 100.0% 60.0%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 5.62e-01 100.0% 82.8%
2f2cA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.75 64.0 4.64e-01 100.0% 47.2%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 59.0 5.41e-01 100.0% 66.1%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 5.24e-01 97.2% 59.4%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.75 61.0 4.22e-01 100.0% 27.0%
3fymA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 56.0 4.33e-01 83.3% 39.0%
1fi2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.75 60.0 3.76e-01 91.7% 17.4%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 5.12e-01 100.0% 66.7%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 4.82e-01 100.0% 46.3%
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 5.33e-01 100.0% 69.5%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 5.15e-01 100.0% 71.6%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 4.11e-01 100.0% 26.0%
2k9lA00 1.10.10.1330 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain 0.74 59.0 4.85e-01 100.0% 52.6%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 5.25e-01 100.0% 60.3%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.73 60.0 5.37e-01 100.0% 82.1%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 57.0 5.05e-01 100.0% 60.3%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 4.46e-01 94.4% 40.4%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 5.41e-01 100.0% 78.0%
2fa5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 4.07e-01 100.0% 28.1%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 4.88e-01 100.0% 60.0%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 4.88e-01 100.0% 49.3%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.73 59.0 5.78e-01 100.0% 92.7%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 57.0 5.25e-01 100.0% 70.4%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 4.69e-01 100.0% 47.5%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 4.58e-01 97.2% 43.5%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 56.0 5.30e-01 100.0% 78.0%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 56.0 5.04e-01 100.0% 63.3%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 53.0 4.43e-01 83.3% 48.5%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 4.50e-01 97.2% 42.5%
2lvsA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 58.0 5.43e-01 100.0% 83.7%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 4.67e-01 100.0% 61.3%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 58.0 4.64e-01 97.2% 47.4%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.70 56.0 3.92e-01 100.0% 26.8%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 4.38e-01 100.0% 40.4%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 55.0 4.79e-01 100.0% 54.5%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 55.0 4.29e-01 97.2% 41.1%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 54.0 3.89e-01 100.0% 33.6%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.69 57.0 4.47e-01 97.2% 79.7%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 56.0 4.72e-01 97.2% 56.9%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 54.0 4.35e-01 100.0% 53.7%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 51.0 4.30e-01 86.1% 52.9%
2vqcA00 1.10.10.1470 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like 0.63 50.0 4.29e-01 100.0% 60.0%
1ojlA03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 46.0 4.44e-01 94.4% 78.7%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.61 48.0 4.15e-01 100.0% 61.2%
2bgwA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.57 44.0 3.78e-01 100.0% 62.2%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4952293 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.97 89.0 8.56e-01 100.0% 90.0%
3932988 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.96 87.0 7.47e-01 100.0% 65.5%
4008959 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 85.0 7.29e-01 100.0% 65.5%
5077769 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.94 83.0 7.45e-01 100.0% 72.0%
4969699 101.1.6.40 alpha arrays › HTH › HTH › TrpR › DUF1670 0.93 83.0 6.31e-01 100.0% 45.0%
5034899 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.92 81.0 4.89e-01 100.0% 16.7%
3927372 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 80.0 6.12e-01 100.0% 45.0%
4995789 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 79.0 7.73e-01 100.0% 90.0%
5021231 101.1.1.544 alpha arrays › HTH › HTH › Three-helical HTH › DUF1670 0.90 77.0 5.85e-01 100.0% 42.4%
3587644 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.89 77.0 6.52e-01 100.0% 60.0%
3879118 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.88 75.0 6.62e-01 100.0% 65.5%
4974224 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 75.0 6.43e-01 100.0% 60.0%
4395941 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.88 74.0 7.52e-01 97.2% 100.0%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.88 75.0 6.06e-01 100.0% 50.7%
4937998 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 74.0 6.95e-01 100.0% 80.0%
5060990 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.87 73.0 4.29e-01 100.0% 13.2%
3797530 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.87 73.0 6.12e-01 100.0% 55.4%
3590732 101.1.1.364 alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 0.86 73.0 6.90e-01 100.0% 82.2%
5028266 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 72.0 6.22e-01 100.0% 62.7%
4943227 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.85 70.0 6.69e-01 100.0% 80.0%
3971636 101.28.1.0 alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins 0.85 70.0 6.84e-01 100.0% 90.0%
5011649 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 69.0 6.60e-01 100.0% 80.0%
5043242 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.84 69.0 5.39e-01 100.0% 44.0%
4133453 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 70.0 6.24e-01 100.0% 74.5%
4054648 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 68.0 6.14e-01 100.0% 67.3%
3977377 101.1.2.836 alpha arrays › HTH › HTH › winged helix domain › Terminase_5 0.83 68.0 4.98e-01 100.0% 36.2%
3590885 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 67.0 5.61e-01 100.0% 51.4%
4529157 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.83 68.0 5.19e-01 100.0% 42.2%
5015850 205.1.1.1 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.82 65.0 4.39e-01 97.2% 23.6%
4486944 7565.1.1.0 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like 0.82 65.0 4.15e-01 94.4% 18.9%
4937081 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 71.0 5.88e-01 100.0% 56.9%
4245572 101.1.8.16 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › HTH_40 0.82 68.0 5.62e-01 100.0% 52.9%
4198219 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 68.0 6.42e-01 100.0% 80.0%
3913655 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.81 65.0 5.25e-01 100.0% 47.5%
3942922 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.81 64.0 5.26e-01 97.2% 48.0%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 66.0 5.80e-01 100.0% 60.0%
4334657 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.81 67.0 6.37e-01 100.0% 80.0%
4510105 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 65.0 6.44e-01 100.0% 92.5%
4952807 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.81 65.0 5.33e-01 100.0% 48.0%
3603167 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.81 64.0 5.55e-01 100.0% 55.4%
4143289 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.81 66.0 5.93e-01 100.0% 67.3%
3278040 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 66.0 5.76e-01 100.0% 60.0%
4965811 101.1.1.559 alpha arrays › HTH › HTH › Three-helical HTH › DUF7858 0.81 66.0 5.75e-01 100.0% 60.0%
4987653 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.81 64.0 6.19e-01 100.0% 82.2%
3404418 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.81 66.0 5.47e-01 100.0% 52.9%
235968 138.1.1.9 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C 0.81 65.0 4.56e-01 100.0% 30.4%
4973199 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.80 64.0 5.63e-01 100.0% 61.7%
4393383 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.80 68.0 6.61e-01 100.0% 92.5%
5056682 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 66.0 5.46e-01 100.0% 52.9%
3391053 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 65.0 6.14e-01 97.2% 86.7%
3964047 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 65.0 4.73e-01 100.0% 32.7%
3985633 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.79 64.0 5.80e-01 100.0% 67.3%
3678231 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.79 64.0 3.83e-01 100.0% 12.9%
3305070 101.1.1.267 alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.79 64.0 5.18e-01 100.0% 48.1%
5043001 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.79 65.0 4.78e-01 100.0% 34.3%
3983783 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.79 64.0 4.87e-01 100.0% 38.9%
4986612 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 70.0 6.49e-01 100.0% 84.4%
5051680 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.79 65.0 5.16e-01 100.0% 50.0%
3975610 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.79 66.0 5.41e-01 100.0% 52.9%
5063318 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.79 62.0 5.67e-01 100.0% 65.5%
3586837 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.79 67.0 6.09e-01 100.0% 88.0%
3565285 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.78 63.0 5.42e-01 100.0% 55.4%
4998605 101.1.1.40 alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.78 62.0 4.60e-01 100.0% 59.1%
3974013 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.78 62.0 5.53e-01 100.0% 61.7%
4974140 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 62.0 4.68e-01 97.2% 35.0%
4492035 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.78 64.0 5.34e-01 100.0% 52.9%
3589192 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.78 68.0 5.25e-01 100.0% 72.5%
3783362 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.78 62.0 3.38e-01 100.0% 5.8%
4939690 101.1.1.40 alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.78 62.0 4.71e-01 100.0% 62.0%
3988724 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 62.0 5.47e-01 100.0% 68.3%
3283589 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.78 66.0 6.02e-01 100.0% 80.0%
5043241 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 63.0 6.19e-01 100.0% 90.0%
1738401 101.1.1.14 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_Zn 0.77 63.0 6.19e-01 100.0% 90.2%
3741290 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.77 64.0 4.91e-01 100.0% 44.4%
4993585 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 61.0 5.43e-01 100.0% 60.0%
4927516 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 62.0 5.50e-01 100.0% 60.0%
4661582 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.77 64.0 4.60e-01 100.0% 33.6%
3290024 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.77 66.0 5.16e-01 100.0% 60.0%
3922450 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 60.0 5.97e-01 100.0% 92.5%
3962903 101.1.2.486 alpha arrays › HTH › HTH › winged helix domain › HTH_58 0.77 63.0 6.17e-01 97.2% 97.5%
3968864 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.77 62.0 5.12e-01 100.0% 49.3%
4031756 101.1.2.645 alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.77 63.0 4.94e-01 100.0% 43.5%
4321251 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.76 63.0 4.96e-01 97.2% 46.8%
4588822 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.76 60.0 5.22e-01 100.0% 56.9%
3972272 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.76 65.0 5.19e-01 100.0% 64.0%
3706139 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 66.0 5.93e-01 100.0% 80.0%
3976103 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.76 65.0 5.43e-01 100.0% 78.5%
3947091 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.76 61.0 5.37e-01 100.0% 61.7%
4659976 101.1.1.25 alpha arrays › HTH › HTH › Three-helical HTH › DUF433 0.75 63.0 4.24e-01 100.0% 29.4%
4008147 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.75 64.0 5.38e-01 100.0% 73.8%
3619451 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 61.0 5.21e-01 100.0% 60.0%
3958970 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.75 60.0 4.82e-01 97.2% 46.3%
3944309 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.75 60.0 5.58e-01 100.0% 76.0%
3971414 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.75 60.0 5.32e-01 100.0% 61.7%
4008322 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.72 57.0 5.21e-01 100.0% 67.3%
3287232 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 55.0 4.64e-01 97.2% 48.0%
5024511 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 56.0 5.26e-01 100.0% 82.0%
3410877 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 54.0 4.69e-01 100.0% 57.1%
4964802 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 55.0 4.94e-01 100.0% 66.7%
3693312 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 53.0 4.68e-01 94.4% 65.0%