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KC542353.1__AGR46564.1__TW1_048__00048

Bact-Vir

KC542353.1__AGR46564.1__TW1_048__00048

Identity

Accession:
KC542353 ↗
Kingdom:
phage

Quality

93.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-53
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24875.2 best DUF7736 44.5 2.00e-11 95.8% 62.7%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2i6xA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.66 51.0 4.50e-01 89.6% 57.7%
5deqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 45.0 3.77e-01 89.6% 44.6%
8cuyA01 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.60 49.0 4.37e-01 97.9% 85.1%
2w00A02 3.90.640.50 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.60 41.0 3.69e-01 72.9% 93.2%
2n50A00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.57 46.0 4.06e-01 97.9% 81.0%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 3.82e-01 91.7% 85.7%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4994339 601.5.1.0 alpha bundles › Four-helical up-and-down bundle › Colicin D immunity protein › Colicin D immunity protein 0.52 38.0 3.51e-01 85.4% 84.3%