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KC571504.1__AGM61364.1__BTP1_5__00001
Bact-VirKC571504.1__AGM61364.1__BTP1_5__00001
Identity
- Accession:
- KC571504 ↗
- Kingdom:
- phage
Quality
82.2
mean pLDDT
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-92
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lbvA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.66 | 41.0 | 3.60e-01 | 100.0% | 42.8% |
| 2b61A02 | 1.10.1740.110 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.53 | 36.0 | 3.54e-01 | 95.7% | 62.5% |
| 1dn1B00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 42.0 | 3.14e-01 | 90.2% | 35.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3476351 | 604.4.1.0 ↗ | alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP | 0.70 | 38.0 | 3.93e-01 | 92.4% | 55.3% |
| 4625344 | 152.1.2.0 ↗ | alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit | 0.65 | 38.0 | 4.23e-01 | 100.0% | 75.7% |
| 4161951 | 4983.1.1.1 ↗ | alpha superhelices › Indoleamine 2,3-dioxygenase N-terminal subdomain › Indoleamine 2,3-dioxygenase N-terminal subdomain › Indoleamine 2,3-dioxygenase N-terminal subdomain › IDO | 0.62 | 31.0 | 2.85e-01 | 93.5% | 36.5% |
| 3693018 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.52 | 44.0 | 3.85e-01 | 98.9% | 94.0% |
| 4666137 | 109.4.1.1387 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dymeclin, Hid1 | 0.52 | 39.0 | 2.41e-01 | 80.4% | 98.5% |
| 3601375 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 41.0 | 3.15e-01 | 89.1% | 47.4% |
| 3972279 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.51 | 44.0 | 3.49e-01 | 100.0% | 99.0% |
D2
medium
residues 93-170
Domain cluster:
rep: NC_048152.1__YP_009819676.1__HOV09_gp03__00003__D160-216
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kdrA02 | 3.40.140.120 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › | 0.79 | 52.0 | 4.37e-01 | 100.0% | 40.9% |
| 3zgzD04 | 2.20.28.290 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.59 | 36.0 | 3.94e-01 | 85.9% | 75.8% |
| 1jiwI00 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 45.0 | 4.07e-01 | 82.1% | 87.6% |
| 4h4nA00 | 2.60.40.3750 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 34.0 | 3.85e-01 | 87.2% | 80.6% |
| 2heqA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 36.0 | 4.14e-01 | 82.1% | 100.0% |
| 1ts9A00 | 2.30.30.210 | Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 | 0.54 | 35.0 | 3.34e-01 | 87.2% | 53.1% |
| 3m70A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 32.0 | 2.93e-01 | 100.0% | 42.5% |
| 2qlcA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 41.0 | 3.46e-01 | 98.7% | 50.0% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 36.0 | 3.10e-01 | 94.9% | 42.0% |
| 1y0mA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 36.0 | 3.93e-01 | 100.0% | 96.7% |
| 2uwiA02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.50 | 27.0 | 3.20e-01 | 79.5% | 86.4% |
| 4khbD02 | 2.30.29.220 | Mainly Beta › Roll › PH-domain like › Structure-specific recognition protein (SSRP1) | 0.50 | 35.0 | 3.50e-01 | 75.6% | 71.6% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964370 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.83 | 72.0 | 7.05e-01 | 98.7% | 85.9% |
| 3949049 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.83 | 65.0 | 6.43e-01 | 100.0% | 78.3% |
| 5039293 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.82 | 73.0 | 7.43e-01 | 98.7% | 97.3% |
| 4034031 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.80 | 62.0 | 6.75e-01 | 89.7% | 96.9% |
| 146202 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.79 | 52.0 | 6.04e-01 | 100.0% | 98.1% |
| 4031151 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.78 | 66.0 | 6.80e-01 | 100.0% | 94.7% |
| 5082482 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.76 | 64.0 | 6.58e-01 | 100.0% | 94.7% |
| 3942998 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.75 | 61.0 | 6.45e-01 | 100.0% | 97.1% |
| 4079740 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.69 | 61.0 | 5.47e-01 | 94.9% | 100.0% |
| 3164773 | 4038.1.1.8 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Abc1-like | 0.68 | 61.0 | 5.81e-01 | 100.0% | 97.8% |
| 5083372 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.63 | 57.0 | 5.61e-01 | 100.0% | 98.8% |
| 4104506 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.62 | 36.0 | 4.38e-01 | 82.1% | 100.0% |
| 2531595 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.59 | 36.0 | 4.21e-01 | 85.9% | 92.2% |
| 4372288 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.59 | 37.0 | 4.02e-01 | 85.9% | 80.0% |
| 2537708 | 4056.1.1.4 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Head-tail_con | 0.58 | 52.0 | 4.34e-01 | 100.0% | 93.2% |
| 3026414 | 4056.1.1.4 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Head-tail_con | 0.57 | 51.0 | 4.37e-01 | 100.0% | 98.4% |
| 4034609 | 4056.1.1.1 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_prot_Gp6 | 0.57 | 51.0 | 4.56e-01 | 100.0% | 97.3% |
| 4253108 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.56 | 37.0 | 3.58e-01 | 100.0% | 58.0% |
| 5005903 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.55 | 36.0 | 3.40e-01 | 100.0% | 52.0% |
| 3110784 | 4056.1.1.4 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Head-tail_con | 0.55 | 49.0 | 4.25e-01 | 100.0% | 93.3% |
| 2971257 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.55 | 41.0 | 4.41e-01 | 100.0% | 96.9% |
| 3402045 | 220.1.1.158 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 | 0.53 | 45.0 | 4.13e-01 | 97.4% | 85.7% |
| 3569462 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 43.0 | 3.61e-01 | 92.3% | 59.3% |
| 3251815 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 40.0 | 3.46e-01 | 97.4% | 53.8% |
| 5024068 | 243.6.1.1 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 | 0.52 | 34.0 | 3.53e-01 | 78.2% | 72.0% |
| 3167531 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.52 | 40.0 | 3.47e-01 | 96.2% | 51.1% |
| 4928895 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.51 | 27.0 | 1.88e-01 | 76.9% | 15.7% |