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KC571506.1__AGM61371.1__BTP1_22__00002
Bact-VirKC571506.1__AGM61371.1__BTP1_22__00002
Identity
- Accession:
- KC571506 ↗
- Kingdom:
- phage
Quality
84.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-64
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1d0qA00 | 3.90.580.10 | Alpha Beta › Alpha-Beta Complex › DNA Primase; Chain A › Zinc finger, CHC2-type domain | 0.87 | 77.0 | 6.14e-01 | 100.0% | 51.0% |
| 1nuiA01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.82 | 54.0 | 5.85e-01 | 71.7% | 83.7% |
| 1twfB08 | 3.90.1800.10 | Alpha Beta › Alpha-Beta Complex › DCoH-like › RNA polymerase alpha subunit dimerisation domain | 0.70 | 43.0 | 3.73e-01 | 96.2% | 38.8% |
| 2xzm901 | 6.20.50.180 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.66 | 42.0 | 3.84e-01 | 84.9% | 47.2% |
| 4dzoA02 | 3.30.457.60 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.61 | 51.0 | 4.63e-01 | 100.0% | 88.3% |
| 3k8rA01 | 3.30.2020.40 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 | 0.59 | 42.0 | 3.92e-01 | 77.4% | 97.1% |
| 5flxf00 | 6.20.50.150 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.59 | 39.0 | 3.62e-01 | 83.0% | 50.7% |
| 1pg5B02 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.59 | 49.0 | 4.82e-01 | 98.1% | 100.0% |
| 1v7lA01 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.55 | 38.0 | 2.81e-01 | 73.6% | 86.0% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.55 | 47.0 | 3.70e-01 | 100.0% | 55.8% |
| 1jj2Y00 | 2.20.25.30 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.55 | 46.0 | 4.14e-01 | 92.5% | 68.5% |
| 1l5jA02 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.55 | 38.0 | 2.68e-01 | 75.5% | 83.5% |
| 2xp1A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.55 | 46.0 | 3.92e-01 | 100.0% | 56.8% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.55 | 46.0 | 3.63e-01 | 100.0% | 55.0% |
| 1ujrA01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.55 | 41.0 | 3.63e-01 | 84.9% | 56.6% |
| 2dk6A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.54 | 41.0 | 3.49e-01 | 84.9% | 51.1% |
| 4q28A00 | 3.30.160.780 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 41.0 | 3.38e-01 | 88.7% | 97.3% |
| 1ekgA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.54 | 44.0 | 3.58e-01 | 100.0% | 58.0% |
| 4cc9A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 45.0 | 2.87e-01 | 100.0% | 76.5% |
| 4msxA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 45.0 | 3.83e-01 | 98.1% | 80.6% |
| 2e4qA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.54 | 44.0 | 3.67e-01 | 100.0% | 95.4% |
| 3ottA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 42.0 | 2.70e-01 | 92.5% | 50.8% |
| 2rowA01 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.53 | 41.0 | 3.85e-01 | 92.5% | 87.3% |
| 1zbtA02 | 3.30.70.1660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 43.0 | 3.23e-01 | 100.0% | 85.9% |
| 1m2vB03 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.53 | 34.0 | 3.34e-01 | 83.0% | 58.1% |
| 1g8jB00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.52 | 44.0 | 3.40e-01 | 98.1% | 71.1% |
| 2pn2A00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.52 | 42.0 | 3.22e-01 | 100.0% | 36.5% |
| 1kgsA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 43.0 | 3.58e-01 | 94.3% | 75.5% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 42.0 | 3.34e-01 | 98.1% | 48.8% |
| 2nutB02 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.51 | 33.0 | 3.19e-01 | 88.7% | 54.8% |
| 1f46B00 | 3.30.1400.10 | Alpha Beta › 2-Layer Sandwich › Cell Division Protein Zipa; Chain: A, › ZipA, C-terminal FtsZ-binding domain | 0.51 | 43.0 | 3.27e-01 | 100.0% | 67.1% |
| 2a90A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.51 | 39.0 | 3.24e-01 | 84.9% | 49.0% |
| 2k4jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 39.0 | 3.26e-01 | 90.6% | 51.4% |
| 1q90C00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.50 | 39.0 | 3.19e-01 | 96.2% | 82.5% |
| 3p54A02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.50 | 40.0 | 3.69e-01 | 92.5% | 69.0% |
| 4xcmA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.50 | 41.0 | 3.30e-01 | 100.0% | 48.8% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4539347 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.89 | 80.0 | 6.39e-01 | 100.0% | 52.0% |
| 3274279 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.88 | 82.0 | 6.84e-01 | 100.0% | 71.8% |
| 4680318 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.88 | 80.0 | 6.56e-01 | 100.0% | 57.8% |
| 8015 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.87 | 77.0 | 6.14e-01 | 100.0% | 51.0% |
| 4166935 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.87 | 76.0 | 6.12e-01 | 100.0% | 52.0% |
| 3772921 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.86 | 78.0 | 6.22e-01 | 100.0% | 64.0% |
| 4023805 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.86 | 79.0 | 6.61e-01 | 100.0% | 71.8% |
| 4260807 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.85 | 76.0 | 6.94e-01 | 100.0% | 82.9% |
| 3576759 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 72.0 | 6.56e-01 | 100.0% | 77.1% |
| 3928378 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 72.0 | 6.11e-01 | 100.0% | 62.4% |
| 3412674 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 70.0 | 5.83e-01 | 100.0% | 78.9% |
| 5003468 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.78 | 69.0 | 5.49e-01 | 100.0% | 51.4% |
| 4929702 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 56.0 | 5.74e-01 | 84.9% | 84.0% |
| 4995759 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 66.0 | 5.77e-01 | 100.0% | 73.8% |
| None | — | 0.69 | 46.0 | 3.18e-01 | 71.7% | 81.0% | |
| 3663352 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 50.0 | 4.83e-01 | 90.6% | 75.0% |
| 3601381 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.63 | 54.0 | 3.48e-01 | 100.0% | 44.8% |
| 3717593 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.63 | 55.0 | 3.39e-01 | 100.0% | 39.4% |
| 4389625 | 375.1.1.47 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC | 0.63 | 51.0 | 5.10e-01 | 98.1% | 87.3% |
| 3613928 | 375.1.1.137 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIB_Zn-ribbon_Tryp | 0.62 | 44.0 | 4.68e-01 | 79.2% | 86.7% |
| 3789912 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.62 | 48.0 | 4.22e-01 | 90.6% | 70.6% |
| 3721757 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 52.0 | 4.90e-01 | 100.0% | 86.2% |
| 3921414 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.60 | 46.0 | 4.06e-01 | 84.9% | 59.5% |
| 4996022 | 3006.1.1.1 ↗ | a+b two layers › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Lsm_C | 0.60 | 45.0 | 4.24e-01 | 83.0% | 86.2% |
| 4444869 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.59 | 47.0 | 3.90e-01 | 92.5% | 71.4% |
| 3337215 | 4357.1.1.6 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE_5 | 0.59 | 44.0 | 3.79e-01 | 84.9% | 50.6% |
| 3633782 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 42.0 | 4.06e-01 | 83.0% | 96.9% |
| 3241448 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 50.0 | 3.98e-01 | 100.0% | 74.5% |
| 3704287 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.58 | 47.0 | 4.44e-01 | 92.5% | 76.9% |
| 3744724 | 4357.1.1.3 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE_2 | 0.57 | 43.0 | 3.43e-01 | 84.9% | 47.0% |
| 3977942 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 44.0 | 3.29e-01 | 88.7% | 58.6% |
| 3808970 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 35.0 | 3.58e-01 | 83.0% | 66.0% |
| 4303651 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.55 | 44.0 | 3.59e-01 | 94.3% | 85.8% |
| 3877626 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.55 | 42.0 | 3.58e-01 | 84.9% | 56.7% |
| 4026585 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 39.0 | 2.66e-01 | 77.4% | 33.8% |
| 1285628 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.54 | 45.0 | 3.81e-01 | 98.1% | 78.9% |
| 3786106 | 4357.1.1.3 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE_2 | 0.53 | 45.0 | 3.72e-01 | 98.1% | 63.8% |
| 2745 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.53 | 43.0 | 3.58e-01 | 92.5% | 75.3% |
| 3746817 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.53 | 40.0 | 3.63e-01 | 84.9% | 61.3% |
| 3968923 | 219.1.1.79 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core2 | 0.53 | 42.0 | 3.11e-01 | 94.3% | 31.2% |
| 3890381 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.52 | 40.0 | 3.53e-01 | 84.9% | 57.5% |
| 3995519 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.52 | 43.0 | 3.59e-01 | 98.1% | 76.0% |
| 3680084 | 4.2.1.4 ↗ | beta barrels › SH3 › SAND › SAND › TDBD | 0.52 | 40.0 | 3.67e-01 | 88.7% | 64.0% |
| 3254632 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.51 | 38.0 | 3.64e-01 | 84.9% | 67.7% |
| 909 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.51 | 39.0 | 3.45e-01 | 84.9% | 60.0% |
| 3403338 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.51 | 40.0 | 3.65e-01 | 100.0% | 65.3% |
| 3481222 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.51 | 42.0 | 3.64e-01 | 98.1% | 80.0% |
| 3548728 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.51 | 42.0 | 3.64e-01 | 98.1% | 80.0% |
| 3783047 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.50 | 40.0 | 3.06e-01 | 92.5% | 75.0% |
| 4464727 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.50 | 35.0 | 2.93e-01 | 100.0% | 38.5% |
| 3376270 | 4.2.1.4 ↗ | beta barrels › SH3 › SAND › SAND › TDBD | 0.50 | 39.0 | 3.61e-01 | 94.3% | 65.3% |