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KC576784.1__AGI13059.1__SHIVAL_54__00054
Bact-VirKC576784.1__AGI13059.1__SHIVAL_54__00054
Identity
- Accession:
- KC576784 ↗
- Kingdom:
- phage
Quality
82.3
mean pLDDT
Taxonomy
TaxID: 1296647
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 32-117
Domain cluster:
rep: MH509441.1__AXH46815.1__SEA_ACOLYTE_72__00071__D35-109
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24238.2 best | CDGP | 62.6 | 6.20e-17 | 97.7% | 91.2% |
D2
medium
residues 118-348
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a7gE00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 21.0 | 3.47e-01 | 80.5% | 95.1% |
| 4erdA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 23.0 | 3.28e-01 | 84.8% | 81.5% |
| 5t0oA03 | 3.30.70.1320 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain like | 0.52 | 24.0 | 3.57e-01 | 80.1% | 99.0% |
| 3fmbA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 24.0 | 3.40e-01 | 80.1% | 95.0% |
| 1ep3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 21.0 | 3.21e-01 | 87.9% | 87.9% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.50 | 13.0 | 2.48e-01 | 95.7% | 78.9% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4494197 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.59 | 22.0 | 3.09e-01 | 72.3% | 68.2% |
| 3283745 | 319.1.1.16 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF26059 | 0.55 | 18.0 | 3.18e-01 | 78.8% | 90.7% |
| 3438338 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.53 | 18.0 | 3.16e-01 | 85.3% | 93.3% |
| 3887495 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.52 | 23.0 | 3.29e-01 | 80.1% | 85.2% |
| 3640334 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.51 | 21.0 | 2.76e-01 | 74.5% | 65.0% |
| 3188399 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.51 | 25.0 | 2.97e-01 | 82.7% | 65.0% |