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KC595516.1__AGR47352.1__EMERY_8__00008

Bact-Vir

KC595516.1__AGR47352.1__EMERY_8__00008

Identity

Accession:
KC595516 ↗
Kingdom:
phage

Quality

88.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-40_103-168
PDB
Domain cluster: representative
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5eroA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.65 53.0 3.81e-01 92.5% 30.6%
6v0kA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.65 52.0 3.73e-01 90.6% 29.8%
1qv9A02 6.10.140.120 Special › Helix non-globular › Helix Hairpins › 0.64 43.0 4.42e-01 77.4% 70.9%
7lb8B01 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.64 46.0 3.25e-01 74.5% 31.2%
4fp4A00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.64 57.0 4.39e-01 100.0% 49.4%
4dhdA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.63 57.0 4.03e-01 100.0% 36.9%
3fggA00 1.10.3950.10 Mainly Alpha › Orthogonal Bundle › putative ecf-type sigma factor negative effector from bacillus cereus › putative ecf-type sigma factor negative effector from bacillus cereus 0.62 50.0 4.48e-01 87.7% 61.9%
4wzxA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.62 38.0 4.39e-01 93.4% 86.7%
3lynB00 1.20.150.10 Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein 0.62 45.0 4.26e-01 75.5% 91.1%
3tc1B00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.61 55.0 3.96e-01 100.0% 53.1%
1sj7C00 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.60 45.0 3.85e-01 79.2% 91.6%
7eu3E01 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.59 39.0 4.26e-01 82.1% 82.8%
2d9dA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.58 37.0 4.00e-01 90.6% 76.4%
2gs4A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.57 50.0 4.38e-01 96.2% 84.2%
1kf6A03 1.20.58.100 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.56 37.0 3.56e-01 93.4% 59.2%
2ddhA04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.55 47.0 4.38e-01 93.4% 97.7%
5h5mA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.55 41.0 3.84e-01 83.0% 63.8%
1tjoB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.55 47.0 4.05e-01 96.2% 73.7%
2l3lA01 1.20.58.1250 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain 0.55 34.0 3.47e-01 92.5% 62.3%
3ecsC01 1.20.120.1070 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain 0.54 39.0 4.05e-01 75.5% 100.0%
2e9xA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 40.0 3.73e-01 91.5% 63.3%
1zoyA03 1.20.58.100 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.54 35.0 3.44e-01 93.4% 60.7%
1qlbA03 1.20.58.100 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.53 36.0 3.53e-01 92.5% 62.7%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.53 40.0 3.86e-01 91.5% 70.1%
1zoyD00 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.53 37.0 3.79e-01 81.1% 74.5%
4x28C03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.53 46.0 4.17e-01 95.3% 90.9%
2wdqA03 1.20.58.100 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.53 35.0 3.45e-01 90.6% 61.5%
6jpaE00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.52 45.0 3.80e-01 90.6% 78.1%
1zylA03 1.20.1270.170 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.52 38.0 3.85e-01 76.4% 100.0%
3nvoB02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.51 42.0 4.05e-01 90.6% 78.4%
7wz5A01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.51 43.0 3.88e-01 94.3% 66.9%
4ciuA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 44.0 3.63e-01 96.2% 94.8%
1i6zA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.50 41.0 3.75e-01 91.5% 67.4%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4940694 3843.1.1.0 alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.71 52.0 5.49e-01 82.1% 85.3%
5050590 3352.1.1.0 alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain 0.70 49.0 3.37e-01 70.8% 23.0%
5063260 601.33.1.1 alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › CHAD 0.65 42.0 4.17e-01 74.5% 62.7%
3709988 1189.1.1.0 alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor 0.65 45.0 3.82e-01 70.8% 74.5%
3247812 141.1.1.1 alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › polyprenyl_synt 0.65 58.0 4.10e-01 100.0% 40.9%
3785454 4006.1.1.0 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain 0.64 48.0 4.84e-01 78.3% 91.4%
3471420 3843.1.1.0 alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.63 43.0 4.43e-01 77.4% 74.0%
5061950 141.1.1.1 alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › polyprenyl_synt 0.63 56.0 4.07e-01 100.0% 37.7%
3443676 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.62 43.0 4.49e-01 72.6% 76.0%
5029713 109.59.1.0 alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain 0.62 44.0 4.59e-01 96.2% 79.0%
3389029 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.62 42.0 4.11e-01 90.6% 64.3%
4003326 5051.1.1.2 alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease 0.61 55.0 3.64e-01 98.1% 93.6%
3925206 7015.1.1.0 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.59 50.0 4.59e-01 91.5% 77.1%
3472613 7015.1.1.1 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC 0.57 51.0 4.58e-01 94.3% 78.6%
3695660 5050.1.1.1 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr 0.57 45.0 3.02e-01 85.8% 51.2%
3402061 630.1.1.1 a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › Rubis-subs-bind 0.56 43.0 3.81e-01 79.2% 76.7%
4284004 4106.1.1.1 few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.56 48.0 3.94e-01 94.3% 85.6%
4877165 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.55 40.0 3.41e-01 75.5% 51.4%
3490818 7015.1.1.0 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.55 47.0 4.28e-01 93.4% 80.7%
4024116 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.55 45.0 3.73e-01 90.6% 84.6%
3241046 633.6.1.2 alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX 0.55 46.0 3.97e-01 94.3% 73.7%
3693645 7015.1.1.0 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.54 48.0 4.22e-01 94.3% 81.3%
3697071 5050.1.1.1 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr 0.54 49.0 3.18e-01 100.0% 65.3%
4680153 7015.1.1.1 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC 0.54 46.0 4.24e-01 94.3% 87.1%
3799055 188.1.1.1 alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep 0.54 42.0 3.15e-01 85.8% 46.1%
3248284 622.4.1.0 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.54 41.0 4.13e-01 90.6% 80.0%
5074974 2498.1.1.10 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.54 47.0 3.53e-01 92.5% 71.5%
3561892 4106.1.1.0 few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack 0.53 45.0 4.06e-01 91.5% 74.5%
4945388 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.53 44.0 3.60e-01 90.6% 86.0%
3854957 7015.1.1.0 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.53 45.0 4.22e-01 98.1% 85.2%
5079257 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.52 44.0 3.68e-01 94.3% 87.2%
3687767 4121.1.1.7 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › PF26616 0.52 48.0 3.15e-01 100.0% 55.8%
4609203 5069.1.3.10 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › ATP-synt_I 0.51 37.0 3.65e-01 76.4% 93.0%
4941754 4070.1.1.0 alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like 0.51 43.0 3.60e-01 100.0% 88.3%
4028568 633.10.1.0 alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like 0.50 44.0 3.89e-01 97.2% 71.6%
D2 high residues 43-99
PDB
Domain cluster: representative
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5jpnC01 2.60.40.690 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain 0.71 60.0 4.73e-01 100.0% 59.4%
2zuvA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.71 60.0 5.03e-01 100.0% 79.2%
1ayoA00 2.60.40.690 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain 0.71 59.0 4.70e-01 100.0% 58.5%
3l81A02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.70 60.0 4.94e-01 100.0% 67.3%
8owfA01 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.69 59.0 4.83e-01 100.0% 68.5%
2wcoA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.68 56.0 4.65e-01 100.0% 55.7%
1wcuA00 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.68 57.0 4.30e-01 98.2% 92.6%
3ndzE00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.67 57.0 4.76e-01 100.0% 68.2%
3b34A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.66 55.0 3.99e-01 100.0% 36.7%
1xeuA02 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 55.0 4.96e-01 98.2% 88.0%
2gu9A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 56.0 4.68e-01 100.0% 77.7%
4fx5A01 2.60.40.3670 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 54.0 4.17e-01 100.0% 54.2%
4nehA04 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.65 52.0 4.04e-01 100.0% 53.9%
1xe0C00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.64 54.0 4.60e-01 100.0% 98.0%
3t30C00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.64 53.0 4.64e-01 100.0% 100.0%
2vrqA01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.63 52.0 4.12e-01 98.2% 65.2%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.63 53.0 4.31e-01 100.0% 87.2%
3bpsA02 2.60.120.690 Mainly Beta › Sandwich › Jelly Rolls › Proprotein convertase subtilisin/kexin type 9 0.63 52.0 4.00e-01 100.0% 42.7%
2vbkA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.63 52.0 3.12e-01 100.0% 15.9%
1nqjB00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.63 52.0 4.31e-01 100.0% 82.5%
1hn0A04 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.62 51.0 4.17e-01 100.0% 58.2%
6ea2A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.62 52.0 3.74e-01 100.0% 36.4%
4ca9A00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.62 52.0 4.50e-01 100.0% 90.8%
4a0tA03 2.60.320.30 Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › 0.62 52.0 4.61e-01 100.0% 96.7%
3ghmA03 2.60.120.830 Mainly Beta › Sandwich › Jelly Rolls › 0.61 51.0 3.96e-01 100.0% 87.3%
3wy2A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.61 49.0 4.60e-01 100.0% 74.0%
1wmdA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.61 49.0 4.07e-01 98.2% 100.0%
2cnzA00 2.60.40.1570 Mainly Beta › Sandwich › Immunoglobulin-like › Dr adhesin 0.60 50.0 4.06e-01 100.0% 95.9%
6a48A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 49.0 3.84e-01 100.0% 69.2%
1rgxA02 2.60.40.4230 Mainly Beta › Sandwich › Immunoglobulin-like › Resistin head domain 0.60 50.0 4.90e-01 100.0% 90.6%
2vvfA02 2.60.120.730 Mainly Beta › Sandwich › Jelly Rolls › 0.59 48.0 3.90e-01 100.0% 72.7%
2wskA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 47.0 4.24e-01 96.5% 62.4%
3lp8A04 3.90.600.10 Alpha Beta › Alpha-Beta Complex › Glycinamide Ribonucleotide Synthetase; Chain A, domain 4 › Phosphoribosylglycinamide synthetase, C-terminal domain 0.59 43.0 3.79e-01 82.5% 89.2%
1vx7H01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.59 42.0 3.83e-01 80.7% 92.9%
4f8lA00 2.60.40.3590 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 49.0 3.82e-01 100.0% 59.4%
1cgtA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.58 47.0 4.14e-01 98.2% 70.2%
4a2aA02 3.30.1490.110 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.58 49.0 4.36e-01 100.0% 87.4%
4h3wA01 2.60.290.20 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › Protein of unknown function (DUF4621), C-terminal domain 0.57 48.0 3.81e-01 96.5% 100.0%
1gw5M02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.57 46.0 3.64e-01 100.0% 45.5%
1cx1A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 46.0 3.56e-01 100.0% 68.6%
2dmzA01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.57 49.0 4.20e-01 100.0% 95.7%
3cq9A00 3.40.50.10240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain 0.56 46.0 3.29e-01 100.0% 93.1%
2wpgA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 46.0 4.32e-01 98.2% 77.3%
4aeeA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 3.94e-01 96.5% 73.2%
3bwsA01 2.60.40.3070 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 39.0 3.61e-01 80.7% 70.2%
6gmhC01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.55 44.0 3.46e-01 94.7% 86.3%
3zpeA00 2.60.90.50 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.54 43.0 3.50e-01 100.0% 83.3%
1xjaB00 2.60.120.280 Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC 0.54 46.0 3.46e-01 100.0% 53.2%
2wb7A02 2.60.40.2050 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 42.0 3.26e-01 94.7% 60.6%
1ex0A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 45.0 3.69e-01 100.0% 55.3%
5t89X01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 40.0 3.69e-01 91.2% 85.5%
1yoxA00 3.60.160.10 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Mitochondrial biogenesis AIM24 0.53 42.0 3.09e-01 98.2% 40.5%
2uv8A06 3.30.70.2490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 35.0 3.42e-01 70.2% 73.1%
2i45D00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 43.0 3.73e-01 100.0% 76.8%
2fe0A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 40.0 3.47e-01 98.2% 57.9%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4957573 11.41.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Baseplate wedge protein gp6 Ig-like domain › Baseplate wedge protein gp6 Ig-like domain 0.77 69.0 6.30e-01 100.0% 97.3%
5053833 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.72 60.0 4.30e-01 96.5% 39.4%
5053995 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.72 63.0 5.78e-01 100.0% 82.7%
5071006 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.72 62.0 5.00e-01 100.0% 57.4%
1713379 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.71 60.0 4.92e-01 100.0% 67.9%
5059624 11.1.5.49 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › bMG10 0.70 59.0 4.65e-01 100.0% 57.7%
3956941 11.1.5.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_2 0.70 59.0 5.03e-01 100.0% 72.0%
3908806 11.1.1.297 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.69 58.0 4.54e-01 100.0% 59.3%
3779515 11.1.5.27 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › A2M_recep 0.69 57.0 4.32e-01 100.0% 47.1%
4954877 11.1.1.531 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 0.68 57.0 4.74e-01 100.0% 64.5%
3960974 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.68 59.0 4.06e-01 100.0% 35.6%
1839972 3386.2.1.2 beta sandwiches › gp9 C-terminal domain-like › gp10 domain 2 and domain 3 › gp10 domain 2 and domain 3 › Gp10_D3 0.68 56.0 4.39e-01 100.0% 96.4%
4989577 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.67 57.0 4.59e-01 100.0% 64.2%
5054260 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 56.0 4.69e-01 100.0% 58.2%
5031149 11.1.5.132 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF11 0.67 55.0 4.52e-01 100.0% 55.8%
5041590 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 55.0 4.70e-01 100.0% 64.8%
4969607 11.1.5.49 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › bMG10 0.67 54.0 4.47e-01 100.0% 60.0%
5036544 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.66 54.0 4.73e-01 96.5% 75.3%
4104982 11.1.5.19 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adhesin_Dr 0.66 55.0 4.43e-01 100.0% 67.2%
4992376 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 56.0 5.22e-01 100.0% 84.0%
4940848 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.66 56.0 5.00e-01 100.0% 81.2%
4951652 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.65 54.0 4.60e-01 100.0% 57.1%
5021910 11.1.1.410 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BatD 0.65 54.0 4.56e-01 100.0% 58.1%
3684288 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.65 54.0 4.55e-01 100.0% 61.0%
4945417 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 54.0 4.24e-01 100.0% 54.8%
5026423 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.64 54.0 4.55e-01 100.0% 88.6%
142036 12.1.1.17 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Pullul_strch_C 0.62 51.0 4.24e-01 98.2% 71.2%
5013744 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.61 50.0 4.72e-01 100.0% 81.3%
5026113 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 50.0 4.30e-01 98.2% 99.0%
3186682 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.61 49.0 3.77e-01 98.2% 45.8%
4981901 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 50.0 4.05e-01 100.0% 46.7%
1867109 325.1.1.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › CO dehydrogenase molybdoprotein N-domain-like 0.60 44.0 3.58e-01 82.5% 64.5%
3870891 929.1.1.1 beta duplicates or obligate multimers › Resistin › Resistin › Resistin › Resistin 0.60 50.0 4.52e-01 100.0% 69.4%
8624 929.1.1.1 beta duplicates or obligate multimers › Resistin › Resistin › Resistin › Resistin 0.60 50.0 4.43e-01 100.0% 64.0%
4974351 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 48.0 4.13e-01 100.0% 54.0%
3969233 11.1.5.59 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF4139 0.59 49.0 3.97e-01 100.0% 56.8%
4960977 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 50.0 4.31e-01 100.0% 58.9%
5013898 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.58 47.0 3.47e-01 96.5% 41.1%
5030161 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.58 48.0 3.58e-01 100.0% 40.0%
3855982 11.1.1.50 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Calx-beta 0.58 48.0 3.98e-01 100.0% 82.6%
5071959 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 49.0 4.24e-01 100.0% 60.0%
4988044 11.1.1.410 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BatD 0.57 49.0 3.91e-01 100.0% 47.5%
3562335 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.57 47.0 4.11e-01 100.0% 88.4%
4978203 11.1.1.410 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BatD 0.57 48.0 3.86e-01 100.0% 47.5%
3598569 10.15.1.1 beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like › DUF1935 0.57 46.0 3.81e-01 98.2% 52.2%
2775352 12.1.1.3 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C 0.56 45.0 4.04e-01 96.5% 76.7%
3502080 11.1.1.112 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_1 0.56 48.0 3.67e-01 100.0% 39.3%
3342010 11.1.1.235 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3_6 0.56 43.0 3.86e-01 94.7% 91.6%
4962874 11.1.1.531 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 0.56 48.0 3.66e-01 100.0% 39.3%
4976407 11.1.1.80 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAP_beta 0.56 46.0 3.88e-01 100.0% 79.1%
5027701 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 44.0 3.81e-01 100.0% 85.5%
4936922 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 46.0 3.87e-01 100.0% 80.9%
3623451 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 45.0 3.59e-01 100.0% 49.6%
3987335 11.1.1.85 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3_5 0.55 42.0 3.59e-01 96.5% 89.2%
4632883 217.1.1.2 a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 0.55 45.0 3.26e-01 98.2% 40.5%
5080734 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 42.0 3.64e-01 89.5% 81.0%
4950566 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 45.0 3.75e-01 100.0% 54.8%
3253382 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 45.0 3.73e-01 100.0% 49.6%
3350945 11.1.1.1019 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28382 0.54 43.0 3.38e-01 98.2% 86.5%
5058251 11.1.1.138 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NPCBM_assoc 0.54 44.0 3.85e-01 100.0% 57.0%
5041941 11.1.1.531 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 0.54 43.0 3.65e-01 100.0% 81.7%
4956760 11.1.1.80 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAP_beta 0.53 43.0 3.76e-01 100.0% 57.0%
5082829 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.53 42.0 3.97e-01 98.2% 88.0%
5038901 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 44.0 3.56e-01 100.0% 58.3%
4944419 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.53 41.0 3.46e-01 100.0% 76.8%
3540627 11.1.1.901 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF30053 0.52 43.0 3.50e-01 100.0% 48.0%
3446372 11.1.1.558 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF6598 0.52 37.0 3.57e-01 80.7% 94.3%
5043722 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 41.0 3.56e-01 98.2% 90.5%
4939079 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 41.0 3.90e-01 100.0% 73.3%
5036814 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 45.0 3.59e-01 100.0% 47.5%
5027700 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 39.0 3.54e-01 100.0% 94.0%
5041998 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.51 43.0 3.77e-01 100.0% 61.1%
3232310 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 45.0 3.81e-01 100.0% 60.0%
4034564 10.11.1.1 beta sandwiches › jelly-roll › Thiamin pyrophosphokinase, substrate-binding domain › Thiamin pyrophosphokinase, substrate-binding domain › TPK_B1_binding 0.51 42.0 3.88e-01 100.0% 100.0%
5061237 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 40.0 3.59e-01 98.2% 61.1%