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KC595516.1__AGR47355.2__EMERY_12__00012
Bact-VirKC595516.1__AGR47355.2__EMERY_12__00012
Identity
- Accession:
- KC595516 ↗
- Kingdom:
- phage
Quality
82.9
mean pLDDT
Cluster
View cluster (49 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 109-209
Domain cluster:
rep: IMGVR_UViG_3300028917_000377-3300028917-Ga0310070_10387315__D89-178
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hxlA02 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.82 | 61.0 | 6.43e-01 | 100.0% | 85.6% |
| 3lmlA03 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.81 | 61.0 | 6.65e-01 | 100.0% | 94.1% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 30.0 | 3.89e-01 | 86.1% | 89.8% |
| 3bzcA03 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.54 | 39.0 | 3.69e-01 | 76.2% | 100.0% |
| 2a9sB00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.54 | 40.0 | 3.42e-01 | 77.2% | 83.0% |
| 3bexA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 40.0 | 3.62e-01 | 78.2% | 99.3% |
| 2ap1A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 39.0 | 3.58e-01 | 78.2% | 98.6% |
| 1ri6A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 37.0 | 2.65e-01 | 76.2% | 22.5% |
| 3a0oA03 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 41.0 | 3.10e-01 | 88.1% | 72.2% |
| 2hczX02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.52 | 38.0 | 3.86e-01 | 79.2% | 93.3% |
| 1wr2A01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 44.0 | 3.92e-01 | 98.0% | 70.7% |
| 4guzA01 | 3.30.2140.10 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase | 0.52 | 36.0 | 3.06e-01 | 73.3% | 87.3% |
| 1vzyA01 | 3.55.30.10 | Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain | 0.51 | 42.0 | 3.28e-01 | 91.1% | 72.2% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 28.0 | 3.40e-01 | 80.2% | 85.5% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 28.0 | 3.23e-01 | 79.2% | 75.0% |
| 1hw7A01 | 3.55.30.10 | Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain | 0.51 | 41.0 | 3.53e-01 | 91.1% | 93.1% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4957557 | 3629.1.1.0 ↗ | beta sandwiches › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain | 0.93 | 85.0 | 8.24e-01 | 100.0% | 87.3% |
| 5060660 | 3629.1.1.0 ↗ | beta sandwiches › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain | 0.88 | 85.0 | 7.89e-01 | 100.0% | 91.7% |
| 1176366 | 3629.1.1.1 ↗ | beta sandwiches › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Phage_sheath_domII | 0.81 | 61.0 | 6.41e-01 | 100.0% | 86.0% |
| 4211209 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.65 | 34.0 | 4.03e-01 | 90.1% | 75.4% |
| 3930399 | 4075.1.1.0 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain | 0.65 | 52.0 | 5.28e-01 | 95.0% | 87.9% |
| 4290012 | 848.1.1.1 ↗ | a+b complex topology › Hsp33 domain › Hsp33 domain › Hsp33 domain › HSP33 | 0.60 | 48.0 | 3.63e-01 | 85.1% | 58.7% |
| 85695 | 848.1.1.0 ↗ | a+b complex topology › Hsp33 domain › Hsp33 domain › Hsp33 domain | 0.60 | 46.0 | 3.59e-01 | 84.2% | 59.7% |
| 4014812 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.59 | 32.0 | 3.99e-01 | 82.2% | 88.3% |
| 4998346 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.59 | 34.0 | 3.12e-01 | 89.1% | 43.1% |
| 3964664 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.58 | 31.0 | 3.61e-01 | 88.1% | 73.5% |
| 4121613 | 848.1.1.1 ↗ | a+b complex topology › Hsp33 domain › Hsp33 domain › Hsp33 domain › HSP33 | 0.58 | 46.0 | 3.50e-01 | 85.1% | 60.0% |
| 3163776 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.55 | 33.0 | 3.09e-01 | 89.1% | 46.2% |
| 3510139 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.53 | 38.0 | 3.10e-01 | 76.2% | 65.1% |
| 4389388 | 848.1.1.1 ↗ | a+b complex topology › Hsp33 domain › Hsp33 domain › Hsp33 domain › HSP33 | 0.52 | 43.0 | 3.31e-01 | 91.1% | 69.4% |
| 3827447 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.52 | 41.0 | 3.37e-01 | 87.1% | 87.2% |
| 4969052 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 41.0 | 2.86e-01 | 85.1% | 94.6% |
| 4003932 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.51 | 39.0 | 3.68e-01 | 79.2% | 98.3% |
| 4975654 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.51 | 44.0 | 3.47e-01 | 99.0% | 81.5% |
| 4979281 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.51 | 43.0 | 3.37e-01 | 95.0% | 90.2% |
| 4236582 | 848.1.1.1 ↗ | a+b complex topology › Hsp33 domain › Hsp33 domain › Hsp33 domain › HSP33 | 0.51 | 45.0 | 3.51e-01 | 99.0% | 90.0% |
| 4028875 | 5.1.4.237 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_2nd | 0.51 | 35.0 | 2.43e-01 | 75.2% | 18.9% |
| 3407530 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.50 | 35.0 | 3.22e-01 | 96.0% | 54.1% |
| 4988423 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.50 | 33.0 | 3.62e-01 | 80.2% | 86.3% |
D2
medium
residues 32-100_219-328_398-416
Domain cluster:
rep: KT624200.1__AMM44842.1__SP15_043__00044__D22-84_198-292
CATH (65)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dadA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.74 | 48.0 | 5.84e-01 | 99.5% | 99.2% |
| 1eucB03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.72 | 47.0 | 5.44e-01 | 88.9% | 89.0% |
| 3sy8A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 47.0 | 5.56e-01 | 98.5% | 98.5% |
| 4g65A03 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 39.0 | 4.73e-01 | 83.3% | 90.3% |
| 3f4lA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 39.0 | 4.91e-01 | 84.3% | 100.0% |
| 1zh8A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 44.0 | 5.12e-01 | 97.5% | 99.3% |
| 3euwA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 38.0 | 4.82e-01 | 84.8% | 100.0% |
| 3llvA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 40.0 | 4.77e-01 | 79.8% | 94.7% |
| 3e18A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 42.0 | 5.02e-01 | 97.5% | 100.0% |
| 3fhlA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 42.0 | 4.99e-01 | 97.5% | 98.6% |
| 3ezyA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 38.0 | 4.80e-01 | 84.3% | 100.0% |
| 3rc1A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 40.0 | 4.89e-01 | 86.4% | 100.0% |
| 1gcuA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 43.0 | 4.96e-01 | 96.0% | 96.5% |
| 1ta9B01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 41.0 | 4.66e-01 | 84.3% | 86.8% |
| 6o15A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 38.0 | 4.74e-01 | 78.8% | 100.0% |
| 3e82B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 43.0 | 4.96e-01 | 96.5% | 95.9% |
| 3ohsX01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 38.0 | 4.79e-01 | 77.3% | 100.0% |
| 3o9zA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 40.0 | 4.89e-01 | 79.8% | 100.0% |
| 1tltA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 37.0 | 4.72e-01 | 84.3% | 100.0% |
| 3i09A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 51.0 | 5.06e-01 | 99.5% | 83.4% |
| 8ffuA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.61 | 44.0 | 4.18e-01 | 97.0% | 62.0% |
| 1ydwA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 40.0 | 4.82e-01 | 85.9% | 100.0% |
| 3ceaA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 44.0 | 4.98e-01 | 96.5% | 97.3% |
| 3uhjC01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 39.0 | 4.40e-01 | 84.3% | 82.9% |
| 2l82A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 46.0 | 5.08e-01 | 95.5% | 98.1% |
| 3q2iA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 45.0 | 4.88e-01 | 94.9% | 93.8% |
| 2x5dD02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.59 | 44.0 | 4.11e-01 | 97.0% | 62.1% |
| 2p2sA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 40.0 | 4.67e-01 | 96.0% | 98.5% |
| 4gqaD01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 40.0 | 4.74e-01 | 86.9% | 100.0% |
| 1evjA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 44.0 | 4.89e-01 | 96.5% | 97.5% |
| 5y8lB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 43.0 | 4.74e-01 | 89.4% | 93.1% |
| 3moiA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 43.0 | 4.52e-01 | 95.5% | 84.0% |
| 3dtyA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 47.0 | 4.94e-01 | 97.0% | 92.3% |
| 1vchD00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 36.0 | 3.83e-01 | 80.3% | 69.4% |
| 3oqbA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 39.0 | 4.60e-01 | 79.3% | 99.3% |
| 1td2A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 48.0 | 4.21e-01 | 89.9% | 82.2% |
| 2nwhA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 48.0 | 4.10e-01 | 89.4% | 84.7% |
| 2g0tB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 38.0 | 4.33e-01 | 85.4% | 91.8% |
| 5tdeA03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.56 | 46.0 | 4.69e-01 | 85.9% | 90.5% |
| 2ixaA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 45.0 | 4.79e-01 | 96.0% | 98.2% |
| 6ilsA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 49.0 | 4.18e-01 | 93.9% | 88.1% |
| 5c40B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 49.0 | 4.16e-01 | 93.9% | 87.5% |
| 3ai2A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 49.0 | 4.45e-01 | 95.5% | 93.9% |
| 4fc7D00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 49.0 | 4.36e-01 | 94.9% | 87.1% |
| 3ry7A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 49.0 | 4.24e-01 | 96.5% | 88.8% |
| 3nntA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 44.0 | 4.03e-01 | 84.8% | 89.1% |
| 3r14A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 48.0 | 4.66e-01 | 94.4% | 92.2% |
| 2b34A00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.54 | 42.0 | 4.26e-01 | 90.4% | 82.8% |
| 8c9vA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 39.0 | 4.07e-01 | 96.5% | 81.2% |
| 4ymiB00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 41.0 | 4.20e-01 | 84.3% | 81.8% |
| 4xcvA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 40.0 | 4.10e-01 | 80.3% | 81.8% |
| 5idyA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 47.0 | 4.26e-01 | 94.9% | 92.0% |
| 2py6A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 42.0 | 4.37e-01 | 94.9% | 91.7% |
| 1h5qA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 46.0 | 4.21e-01 | 94.9% | 93.1% |
| 5v1qB01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 40.0 | 3.53e-01 | 78.8% | 88.5% |
| 2oodA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.52 | 48.0 | 4.05e-01 | 99.0% | 100.0% |
| 5uj1A01 | 3.40.50.140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 35.0 | 4.03e-01 | 87.9% | 93.1% |
| 3go6A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 47.0 | 4.13e-01 | 97.0% | 85.7% |
| 2i9uA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.52 | 48.0 | 4.10e-01 | 99.0% | 100.0% |
| 5dmmA00 | 3.20.20.330 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain | 0.52 | 44.0 | 3.84e-01 | 88.9% | 93.1% |
| 2gsdA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 38.0 | 3.94e-01 | 85.4% | 79.2% |
| 2w2kA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 38.0 | 3.89e-01 | 83.8% | 77.6% |
| 4py9A01 | 3.90.1640.10 | Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › inorganic pyrophosphatase (n-terminal core) | 0.51 | 39.0 | 3.79e-01 | 84.8% | 72.4% |
| 2h9aA01 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.51 | 43.0 | 3.91e-01 | 88.9% | 86.8% |
| 3nl6C02 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 45.0 | 3.93e-01 | 97.0% | 73.1% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3944167 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.81 | 76.0 | 6.71e-01 | 97.0% | 74.1% |
| 3943425 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.69 | 41.0 | 4.94e-01 | 78.8% | 88.5% |
| None | — | 0.67 | 40.0 | 4.92e-01 | 78.3% | 91.5% | |
| 5013107 | 2007.1.14.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like | 0.64 | 35.0 | 4.52e-01 | 97.0% | 91.3% |
| 4975427 | 2007.15.1.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyrib_tr | 0.64 | 42.0 | 5.09e-01 | 94.4% | 100.0% |
| 5059316 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.64 | 40.0 | 4.87e-01 | 84.3% | 94.6% |
| 5054900 | 7522.1.1.0 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like | 0.64 | 40.0 | 4.49e-01 | 88.4% | 80.7% |
| 1157158 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.63 | 39.0 | 4.91e-01 | 84.8% | 100.0% |
| 1391340 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.62 | 40.0 | 4.88e-01 | 81.8% | 99.2% |
| None | — | 0.62 | 40.0 | 4.91e-01 | 80.8% | 100.0% | |
| 4961711 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.62 | 40.0 | 4.74e-01 | 92.4% | 94.1% |
| 1157154 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.62 | 40.0 | 4.85e-01 | 80.3% | 100.0% |
| 3726676 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.60 | 39.0 | 4.74e-01 | 85.4% | 100.0% |
| 5027790 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.58 | 43.0 | 4.84e-01 | 92.9% | 97.4% |
| 3586484 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.57 | 44.0 | 4.83e-01 | 95.5% | 97.5% |
| 4030832 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.57 | 49.0 | 4.27e-01 | 89.9% | 85.2% |
| 3404504 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.57 | 49.0 | 3.94e-01 | 90.4% | 85.2% |
| 3935767 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.56 | 48.0 | 4.13e-01 | 89.9% | 86.2% |
| 2441981 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.56 | 40.0 | 4.41e-01 | 89.9% | 88.9% |
| 162835 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.56 | 48.0 | 4.10e-01 | 89.4% | 84.7% |
| 3935967 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.56 | 50.0 | 4.28e-01 | 94.9% | 89.4% |
| 3892927 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.56 | 47.0 | 3.91e-01 | 89.9% | 86.0% |
| None | — | 0.56 | 50.0 | 4.29e-01 | 94.4% | 87.3% | |
| 3931390 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.56 | 52.0 | 4.75e-01 | 98.5% | 89.6% |
| 4958609 | 2007.15.1.21 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › PF27219 | 0.56 | 40.0 | 4.46e-01 | 95.5% | 91.9% |
| 3741705 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.56 | 49.0 | 4.28e-01 | 93.9% | 86.6% |
| None | — | 0.56 | 50.0 | 4.23e-01 | 94.9% | 86.6% | |
| 3944874 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.56 | 50.0 | 4.25e-01 | 94.9% | 87.1% |
| 5076910 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.56 | 44.0 | 4.34e-01 | 81.3% | 100.0% |
| 3300603 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.56 | 49.0 | 4.19e-01 | 94.4% | 87.0% |
| None | — | 0.56 | 49.0 | 4.29e-01 | 94.4% | 85.0% | |
| 3978471 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.55 | 49.0 | 4.19e-01 | 95.5% | 85.0% |
| 3292891 | 2003.1.5.121 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF1442 | 0.55 | 39.0 | 3.86e-01 | 98.0% | 67.6% |
| None | — | 0.55 | 49.0 | 4.11e-01 | 94.4% | 85.8% | |
| 3977922 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.55 | 49.0 | 4.19e-01 | 94.4% | 87.5% |
| 4939485 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.55 | 49.0 | 4.39e-01 | 94.4% | 85.3% |
| 4065547 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.55 | 49.0 | 4.30e-01 | 94.9% | 89.1% |
| None | — | 0.55 | 49.0 | 4.17e-01 | 94.4% | 87.9% | |
| 3236415 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.54 | 48.0 | 4.20e-01 | 94.9% | 91.0% |
| 4938288 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.54 | 45.0 | 4.65e-01 | 94.4% | 93.0% |
| 5051622 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.54 | 48.0 | 4.06e-01 | 93.4% | 87.9% |
| 4952580 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.54 | 48.0 | 4.51e-01 | 94.4% | 91.7% |
| 3593411 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.54 | 49.0 | 3.88e-01 | 96.5% | 90.3% |
| 3709683 | 2003.1.1.39 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_NADP | 0.54 | 49.0 | 3.87e-01 | 96.5% | 91.5% |
| 4948798 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.54 | 48.0 | 4.35e-01 | 94.4% | 87.3% |
| 3500851 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.54 | 48.0 | 4.05e-01 | 94.4% | 90.9% |
| 4891291 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.54 | 47.0 | 4.12e-01 | 94.4% | 90.7% |
| 4304222 | 7512.1.1.31 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_4 | 0.53 | 45.0 | 4.48e-01 | 89.9% | 97.1% |
| 4958031 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.53 | 49.0 | 4.94e-01 | 98.5% | 100.0% |
| 3531376 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.53 | 45.0 | 4.50e-01 | 90.4% | 93.6% |
| 3787774 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.53 | 49.0 | 3.80e-01 | 100.0% | 94.8% |
| 3947915 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.53 | 49.0 | 4.03e-01 | 99.5% | 90.9% |
| 5066221 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.52 | 47.0 | 4.27e-01 | 95.5% | 85.0% |
| 4963881 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.52 | 46.0 | 4.14e-01 | 94.9% | 81.7% |
| 3971540 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.52 | 48.0 | 3.72e-01 | 100.0% | 84.1% |
| 8925 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.52 | 48.0 | 4.10e-01 | 99.5% | 99.7% |
| None | — | 0.52 | 45.0 | 4.03e-01 | 93.4% | 88.9% | |
| 3702920 | 2007.1.3.28 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Glyco_transf_61 | 0.52 | 43.0 | 4.30e-01 | 99.5% | 84.8% |
| 4967394 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.51 | 44.0 | 3.86e-01 | 93.9% | 89.0% |
| 3970600 | 7512.1.1.31 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_4 | 0.50 | 44.0 | 4.51e-01 | 93.4% | 99.0% |
D3
medium
residues 329-397
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ke2B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 37.0 | 3.43e-01 | 72.5% | 57.3% |
| 1n9eA01 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.53 | 43.0 | 2.65e-01 | 95.7% | 68.2% |
| 2v79A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 39.0 | 3.38e-01 | 84.1% | 64.3% |
| 2lfvA00 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.51 | 32.0 | 2.83e-01 | 76.8% | 41.5% |
| 5lp7E01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 39.0 | 2.94e-01 | 87.0% | 93.6% |
| 1mc0A01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.50 | 39.0 | 3.12e-01 | 89.9% | 69.6% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3255741 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.63 | 48.0 | 3.56e-01 | 82.6% | 69.4% |
| 3258276 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.60 | 47.0 | 3.36e-01 | 88.4% | 54.7% |
| 3205036 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.56 | 42.0 | 3.01e-01 | 85.5% | 47.3% |
| 3531322 | 101.1.2.564 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27514 | 0.52 | 35.0 | 3.65e-01 | 82.6% | 75.4% |
| 5059322 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.52 | 36.0 | 2.91e-01 | 73.9% | 80.0% |
| 3992652 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.51 | 36.0 | 3.42e-01 | 76.8% | 100.0% |
D4
medium
residues 417-503
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ls1A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.64 | 54.0 | 5.36e-01 | 90.8% | 93.3% |
| 1wleA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.62 | 48.0 | 3.30e-01 | 85.1% | 67.5% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.61 | 45.0 | 3.49e-01 | 77.0% | 57.8% |
| 1kewA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.59 | 31.0 | 3.21e-01 | 71.3% | 52.4% |
| 1ri5A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 37.0 | 2.69e-01 | 94.3% | 21.0% |
| 2qguA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 42.0 | 3.99e-01 | 74.7% | 80.2% |
| 1n2bB02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.58 | 43.0 | 4.11e-01 | 95.4% | 66.3% |
| 2fkcA01 | 3.40.1350.40 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.58 | 43.0 | 4.03e-01 | 80.5% | 74.5% |
| 2du7A02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.55 | 41.0 | 3.09e-01 | 94.3% | 30.3% |
| 3tavA00 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.55 | 47.0 | 3.43e-01 | 97.7% | 47.3% |
| 2du7B03 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.55 | 41.0 | 2.86e-01 | 94.3% | 22.5% |
| 4bs9A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 48.0 | 3.71e-01 | 100.0% | 71.7% |
| 4xq7A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.55 | 46.0 | 3.86e-01 | 95.4% | 69.9% |
| 3ripA02 | 1.20.120.1900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Gamma-tubulin complex, C-terminal domain | 0.54 | 46.0 | 3.26e-01 | 95.4% | 31.5% |
| 1chmA02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.54 | 46.0 | 3.47e-01 | 100.0% | 41.1% |
| 3s6bA01 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.54 | 41.0 | 2.93e-01 | 81.6% | 94.3% |
| 1fl2A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 37.0 | 3.32e-01 | 72.4% | 84.7% |
| 3f8dA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 38.0 | 3.45e-01 | 77.0% | 83.7% |
| 1ekrA00 | 3.30.70.640 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Molybdopterin cofactor biosynthesis C (MoaC) domain | 0.52 | 43.0 | 3.68e-01 | 90.8% | 81.1% |
| 4hn3A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.52 | 43.0 | 3.02e-01 | 96.6% | 66.0% |
| 1cc1L00 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.52 | 42.0 | 2.72e-01 | 92.0% | 96.1% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 30.0 | 3.35e-01 | 90.8% | 73.5% |
| 4i98C01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 38.0 | 4.08e-01 | 86.2% | 92.0% |
| 3unpA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 40.0 | 3.21e-01 | 88.5% | 61.7% |
| 2zyrA02 | 2.60.40.2190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 39.0 | 3.81e-01 | 82.8% | 87.2% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995823 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.71 | 63.0 | 5.84e-01 | 97.7% | 81.8% |
| 3588765 | 101.1.2.187 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_C | 0.62 | 49.0 | 4.51e-01 | 83.9% | 83.6% |
| 3417475 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.62 | 51.0 | 3.31e-01 | 92.0% | 40.0% |
| 4146573 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.61 | 50.0 | 3.12e-01 | 89.7% | 51.7% |
| 4034416 | 2004.1.1.481 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_29 | 0.61 | 50.0 | 3.24e-01 | 89.7% | 36.2% |
| 3393966 | 295.1.1.49 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › BTB | 0.57 | 39.0 | 3.68e-01 | 92.0% | 56.4% |
| 5014173 | 2004.1.1.293 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 | 0.56 | 46.0 | 3.08e-01 | 90.8% | 25.9% |
| 4263405 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.56 | 29.0 | 3.55e-01 | 96.6% | 78.2% |
| 3695645 | 283.1.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase | 0.55 | 48.0 | 3.29e-01 | 100.0% | 79.7% |
| 3735209 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.55 | 49.0 | 3.44e-01 | 98.9% | 81.5% |
| 3980188 | 5.1.3.119 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NANM | 0.53 | 41.0 | 2.69e-01 | 83.9% | 40.3% |
| 4031765 | 3535.1.1.1 ↗ | a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › CamS | 0.53 | 39.0 | 3.59e-01 | 80.5% | 69.7% |
| 4100576 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.52 | 42.0 | 4.09e-01 | 89.7% | 84.0% |
| 4947039 | 314.1.1.3 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d | 0.51 | 38.0 | 2.65e-01 | 96.6% | 21.2% |
| 3502794 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.50 | 27.0 | 3.11e-01 | 93.1% | 69.2% |
| 3484776 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.50 | 42.0 | 3.80e-01 | 96.6% | 66.7% |
| 3502069 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.50 | 38.0 | 3.11e-01 | 80.5% | 96.2% |