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KC595516.1__AGR47399.1__EMERY_66__00066

Bact-Vir

KC595516.1__AGR47399.1__EMERY_66__00066

Identity

Accession:
KC595516 ↗
Kingdom:
phage

Quality

84.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 32-85
PDB
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3qaoA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.75 65.0 4.84e-01 100.0% 38.6%
1z4hA01 1.10.238.160 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.69 58.0 5.77e-01 100.0% 93.1%
5iz3A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.66 49.0 3.45e-01 81.5% 98.9%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 35.0 2.76e-01 100.0% 25.7%
3w6kC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 45.0 3.94e-01 74.1% 54.0%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 50.0 3.72e-01 92.6% 38.7%
2pexA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 50.0 3.78e-01 90.7% 37.5%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 49.0 3.73e-01 90.7% 37.7%
3lkdA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 49.0 3.18e-01 94.4% 87.6%
2wteA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 48.0 4.50e-01 92.6% 73.6%
3cdhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 46.0 3.60e-01 90.7% 38.8%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 50.0 3.62e-01 98.1% 33.8%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 4.14e-01 98.1% 53.5%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 47.0 3.69e-01 92.6% 40.0%
7dklA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 45.0 3.86e-01 83.3% 53.3%
2qenA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 4.14e-01 85.2% 78.6%
2x51A06 3.30.70.1590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 48.0 4.59e-01 98.1% 95.5%
4b8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 3.71e-01 98.1% 41.4%
3e9lA02 1.20.80.40 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region 0.57 44.0 3.89e-01 96.3% 68.4%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 3.67e-01 98.1% 41.9%
6qdjA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 46.0 4.27e-01 100.0% 96.1%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 3.68e-01 98.1% 44.4%
2rd9B01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.56 46.0 3.36e-01 100.0% 82.3%
6g1dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 4.07e-01 96.3% 75.6%
5i0hA02 1.20.5.4820 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.55 44.0 4.14e-01 96.3% 86.1%
2mysA06 1.20.5.4820 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.55 45.0 3.60e-01 100.0% 51.2%
1mw9X02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.55 46.0 3.38e-01 100.0% 36.2%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 42.0 3.96e-01 90.7% 79.2%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 3.72e-01 87.0% 61.0%
3di5A00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.55 45.0 3.45e-01 100.0% 87.2%
6opmD01 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.55 44.0 3.03e-01 100.0% 60.9%
3wa7A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 44.0 2.65e-01 98.1% 80.3%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 3.62e-01 90.7% 54.7%
2fsjA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 39.0 2.99e-01 81.5% 68.8%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.73e-01 98.1% 70.0%
4i1sA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 35.0 2.83e-01 70.4% 52.6%
1gkuB06 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.52 43.0 3.23e-01 100.0% 98.1%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3589675 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.80 66.0 6.78e-01 96.3% 100.0%
4950846 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.80 67.0 6.93e-01 94.4% 100.0%
3589467 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.79 66.0 5.72e-01 98.1% 60.0%
5027627 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.79 69.0 6.88e-01 100.0% 100.0%
3960483 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.78 65.0 6.72e-01 98.1% 98.0%
3952885 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.77 64.0 6.63e-01 92.6% 100.0%
1827815 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.76 67.0 6.22e-01 100.0% 85.3%
3286117 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.76 66.0 5.10e-01 100.0% 50.4%
4932995 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.76 62.0 6.45e-01 96.3% 100.0%
3589130 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.76 64.0 6.46e-01 100.0% 92.7%
4096952 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.75 66.0 5.17e-01 100.0% 54.8%
4031520 101.1.9.64 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_23 0.75 64.0 6.09e-01 100.0% 93.8%
4266122 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.75 65.0 5.44e-01 100.0% 56.8%
3970754 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.74 63.0 5.66e-01 100.0% 80.0%
2967124 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.74 62.0 5.75e-01 94.4% 73.9%
5047649 101.1.9.36 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.74 62.0 6.39e-01 92.6% 100.0%
3278826 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.74 61.0 4.82e-01 98.1% 43.3%
4090636 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.74 64.0 5.93e-01 100.0% 77.1%
3280706 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.73 63.0 5.58e-01 100.0% 78.8%
5000254 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.73 60.0 6.21e-01 92.6% 100.0%
3590852 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.73 63.0 5.27e-01 100.0% 60.0%
3587522 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.73 62.0 5.75e-01 98.1% 77.1%
3979434 101.1.9.101 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF1441 0.72 60.0 6.00e-01 100.0% 94.5%
3291218 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.72 61.0 4.72e-01 100.0% 48.5%
2876157 101.1.9.105 alpha arrays › HTH › HTH › Putative DNA-binding domain › PF30176 0.72 61.0 6.16e-01 100.0% 100.0%
3799483 101.1.2.122 alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K 0.70 50.0 5.15e-01 81.5% 84.0%
1834379 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.69 58.0 5.55e-01 100.0% 81.8%
3839973 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.69 56.0 5.52e-01 100.0% 88.3%
3205121 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.68 59.0 5.25e-01 100.0% 75.0%
4021723 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.68 58.0 4.92e-01 100.0% 63.2%
4971763 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 47.0 4.62e-01 79.6% 71.7%
4933456 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.64 52.0 4.58e-01 90.7% 62.5%
4948782 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.64 52.0 4.66e-01 90.7% 66.7%
5071075 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.63 51.0 4.41e-01 90.7% 57.6%
4943612 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 50.0 3.89e-01 90.7% 41.7%
3811947 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.62 47.0 3.91e-01 100.0% 44.8%
5031624 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.61 50.0 4.29e-01 92.6% 55.6%
4946594 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 50.0 4.10e-01 92.6% 51.0%
5002415 101.1.2.728 alpha arrays › HTH › HTH › winged helix domain › PF31122 0.59 48.0 3.87e-01 92.6% 50.0%
5020992 101.1.2.728 alpha arrays › HTH › HTH › winged helix domain › PF31122 0.58 47.0 3.81e-01 92.6% 50.0%
5000830 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 48.0 4.15e-01 98.1% 67.8%
5030054 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 47.0 3.90e-01 100.0% 49.1%
5018074 101.1.2.728 alpha arrays › HTH › HTH › winged helix domain › PF31122 0.56 47.0 3.90e-01 98.1% 55.2%
5002953 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.56 45.0 4.07e-01 92.6% 64.6%
3621304 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 45.0 3.95e-01 92.6% 71.8%
1722503 101.1.2.129 alpha arrays › HTH › HTH › winged helix domain › BpuJI_N 0.56 42.0 3.27e-01 85.2% 46.9%
4961645 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.56 46.0 4.01e-01 98.1% 61.1%
4974766 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 43.0 3.98e-01 92.6% 69.3%
3980981 101.19.1.1 alpha arrays › HTH › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › HemN_C 0.55 46.0 4.20e-01 98.1% 72.0%
5040315 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 46.0 3.98e-01 100.0% 71.1%
4947228 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 45.0 3.80e-01 98.1% 71.0%
3173825 101.1.2.183 alpha arrays › HTH › HTH › winged helix domain › MUS81-like_WH 0.54 42.0 3.71e-01 98.1% 76.8%
2097968 101.1.2.4 alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.54 43.0 3.94e-01 100.0% 79.3%
5057557 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.53 43.0 2.75e-01 100.0% 86.3%
3826771 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.53 42.0 3.34e-01 98.1% 40.0%
3694838 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 43.0 2.90e-01 92.6% 26.4%
5033726 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.53 41.0 3.50e-01 98.1% 49.0%
4953298 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.53 43.0 3.40e-01 98.1% 42.3%
3282607 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 44.0 3.43e-01 98.1% 43.2%
5063559 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 35.0 3.30e-01 74.1% 86.7%
5047029 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.52 42.0 3.48e-01 98.1% 63.3%
5066439 304.3.1.14 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › DrrA1-3_C 0.52 42.0 4.02e-01 98.1% 78.5%
5039734 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 38.0 3.67e-01 90.7% 71.9%
3167073 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.51 42.0 3.13e-01 100.0% 48.8%
5043806 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 39.0 3.58e-01 100.0% 70.0%