←Back to structures
KC699836.1__AGK86948.1__SIOphi_00700__00140
Bact-VirKC699836.1__AGK86948.1__SIOphi_00700__00140
Identity
- Accession:
- KC699836 ↗
- Kingdom:
- phage
Quality
78.8
mean pLDDT
Taxonomy
TaxID: 1285382
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-58
Domain cluster:
rep: IMGVR_UViG_3300025164_001581-3300025164-Ga0209521_100169448__D8-57
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.69 | 48.0 | 4.24e-01 | 73.2% | 58.2% |
| 3lcvB01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.67 | 52.0 | 5.20e-01 | 89.3% | 93.0% |
| 1cf7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 45.0 | 4.00e-01 | 76.8% | 48.8% |
| 4bj1A01 | 1.20.120.1650 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.64 | 54.0 | 4.32e-01 | 94.6% | 61.9% |
| 2dodA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.64 | 46.0 | 4.10e-01 | 83.9% | 53.7% |
| 3nivC02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.63 | 46.0 | 3.59e-01 | 80.4% | 35.5% |
| 2yqzA02 | 1.10.8.900 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 42.0 | 3.97e-01 | 71.4% | 57.4% |
| 4oo0B00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.63 | 48.0 | 3.22e-01 | 82.1% | 32.4% |
| 5b57B00 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.61 | 50.0 | 3.12e-01 | 94.6% | 27.4% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.59 | 41.0 | 3.71e-01 | 82.1% | 51.9% |
| 2guzB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.59 | 40.0 | 3.87e-01 | 76.8% | 61.5% |
| 3djaA01 | 1.20.920.70 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.58 | 44.0 | 3.26e-01 | 92.9% | 31.7% |
| 2e2oA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.57 | 46.0 | 3.29e-01 | 87.5% | 56.0% |
| 1b7eA02 | 1.10.740.10 | Mainly Alpha › Orthogonal Bundle › Transferase Inhibitor Protein From Tn5; Chain A, domain2 › Transferase Inhibitor Protein From Tn5; Chain | 0.57 | 46.0 | 3.60e-01 | 91.1% | 87.3% |
| 1r4gA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.57 | 44.0 | 4.57e-01 | 85.7% | 94.3% |
| 2do9A01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.56 | 43.0 | 3.84e-01 | 85.7% | 83.3% |
| 4r30A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 43.0 | 2.99e-01 | 82.1% | 91.6% |
| 1uyvB02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.55 | 49.0 | 3.08e-01 | 100.0% | 80.1% |
| 3ckdA02 | 1.20.58.360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines | 0.55 | 43.0 | 3.46e-01 | 91.1% | 62.9% |
| 4dq5B00 | 1.10.530.50 | Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 | 0.54 | 47.0 | 3.46e-01 | 100.0% | 38.1% |
| 3bjdA01 | 1.10.1240.20 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain | 0.54 | 44.0 | 3.89e-01 | 96.4% | 98.9% |
| 7ebcA01 | 1.10.10.850 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.54 | 41.0 | 3.27e-01 | 82.1% | 47.4% |
| 3kfwX03 | 1.20.58.1460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 48.0 | 4.36e-01 | 100.0% | 88.2% |
| 1azsA00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.54 | 47.0 | 3.26e-01 | 100.0% | 45.8% |
| 3s0aA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.52 | 37.0 | 3.06e-01 | 78.6% | 72.3% |
| 3cnlA02 | 1.10.1580.10 | Mainly Alpha › Orthogonal Bundle › Conserved Hypothetical Protein Ylqf; Chain: A; domain 2 › | 0.51 | 38.0 | 3.41e-01 | 85.7% | 68.1% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3260615 | 103.4.1.5 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX_2 | 0.73 | 63.0 | 5.57e-01 | 100.0% | 80.0% |
| 4927487 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.71 | 52.0 | 4.75e-01 | 87.5% | 58.7% |
| 4818947 | 7579.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › COesterase | 0.71 | 62.0 | 3.95e-01 | 100.0% | 20.9% |
| 3892899 | 7579.1.1.89 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › COesterase, BD-FAE | 0.71 | 60.0 | 3.48e-01 | 100.0% | 17.1% |
| 4341780 | 4957.1.1.0 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit | 0.70 | 57.0 | 5.45e-01 | 89.3% | 76.9% |
| 3706210 | 7015.1.1.1 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC | 0.70 | 53.0 | 3.46e-01 | 80.4% | 42.3% |
| 4213361 | 602.1.1.3 ↗ | alpha arrays › L-aspartase middle domain-like › L-aspartase middle domain-like › L-aspartase middle domain-like › Lyase_aromatic | 0.69 | 58.0 | 3.60e-01 | 96.4% | 82.4% |
| 3606302 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.68 | 49.0 | 3.35e-01 | 76.8% | 53.8% |
| 4517001 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.67 | 54.0 | 5.63e-01 | 87.5% | 100.0% |
| 3179896 | 143.1.1.0 ↗ | alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain | 0.66 | 52.0 | 5.11e-01 | 87.5% | 88.3% |
| 5009203 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.66 | 52.0 | 5.16e-01 | 87.5% | 83.3% |
| 5001661 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.66 | 57.0 | 4.36e-01 | 98.2% | 97.7% |
| 3958005 | 2499.1.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 | 0.65 | 49.0 | 3.23e-01 | 82.1% | 23.0% |
| 3738219 | 603.1.1.97 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE | 0.62 | 44.0 | 2.99e-01 | 80.4% | 20.0% |
| 3382033 | 611.7.1.15 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Rx_N | 0.62 | 54.0 | 4.10e-01 | 100.0% | 73.6% |
| 3636022 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.61 | 55.0 | 3.26e-01 | 100.0% | 31.8% |
| 3711396 | 148.1.3.179 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_BCS1 | 0.61 | 52.0 | 4.61e-01 | 100.0% | 89.4% |
| 4590703 | 5050.1.1.54 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Mntp | 0.61 | 52.0 | 3.60e-01 | 96.4% | 50.8% |
| 3519081 | 101.1.17.16 ↗ | alpha arrays › HTH › HTH › FF domain › FF_RHG35_4th | 0.60 | 42.0 | 4.13e-01 | 76.8% | 68.3% |
| 3786380 | 2484.1.1.45 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › CAF1 | 0.59 | 49.0 | 3.13e-01 | 92.9% | 19.3% |
| 3502025 | 2485.1.1.67 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GILT | 0.58 | 47.0 | 3.21e-01 | 89.3% | 46.3% |
| 4076590 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.57 | 44.0 | 3.80e-01 | 83.9% | 52.2% |
| 4014429 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.55 | 42.0 | 2.77e-01 | 91.1% | 82.0% |
| 5069953 | 218.2.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 | 0.53 | 47.0 | 3.39e-01 | 98.2% | 48.4% |
| 3439564 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.53 | 46.0 | 3.24e-01 | 100.0% | 72.4% |
| 5047904 | 101.1.2.178 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_61 | 0.51 | 36.0 | 3.19e-01 | 76.8% | 60.0% |