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KC710998.1__AGI61446.1__pSf1_0063__00063
Bact-VirKC710998.1__AGI61446.1__pSf1_0063__00063
Identity
- Accession:
- KC710998 ↗
- Kingdom:
- phage
Quality
79.4
mean pLDDT
Taxonomy
TaxID: 2496551
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-56
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06381.17 best | Phage_portal_3 | 34.0 | 2.00e-08 | 100.0% | 15.4% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pohA02 | 6.10.140.940 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 46.0 | 4.18e-01 | 89.3% | 54.5% |
| 2bskB00 | 1.10.287.810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains | 0.63 | 43.0 | 4.16e-01 | 71.4% | 89.2% |
| 1m3sB00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.61 | 47.0 | 3.31e-01 | 83.9% | 89.6% |
| 6nplA01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.59 | 51.0 | 2.99e-01 | 96.4% | 88.0% |
| 4k7zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 47.0 | 3.19e-01 | 92.9% | 29.5% |
| 3q9oA02 | 3.90.1350.10 | Alpha Beta › Alpha-Beta Complex › Exotoxin A, middle domain › Exotoxin A, middle domain | 0.57 | 45.0 | 3.22e-01 | 87.5% | 41.3% |
| 2rhqB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.56 | 44.0 | 3.82e-01 | 83.9% | 98.8% |
| 1d8cA02 | 2.170.170.11 | Mainly Beta › Beta Complex › Malate synthase G - maily-beta sub-domain › Malate synthase G - maily-beta sub-domain | 0.56 | 44.0 | 3.36e-01 | 85.7% | 57.8% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4025109 | 130.1.1.6 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › PRP4 | 0.73 | 47.0 | 4.38e-01 | 82.1% | 52.9% |
| 3621403 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.61 | 48.0 | 3.63e-01 | 91.1% | 78.0% |
| 3393532 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.57 | 43.0 | 2.90e-01 | 89.3% | 26.4% |
| 3934989 | 193.1.1.0 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like | 0.56 | 43.0 | 3.49e-01 | 89.3% | 42.7% |
| 4939869 | 2487.1.1.1 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › Cpn60_TCP1 | 0.56 | 45.0 | 3.25e-01 | 87.5% | 67.7% |
| 3278243 | 101.1.4.10 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF1870 | 0.53 | 45.0 | 3.61e-01 | 100.0% | 80.8% |
D2
medium
residues 73-124
Domain cluster:
rep: MK335533.1__QAX92034.1__vBSsoS008_027__00027__D1-47