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KC821607.1__AGO47300.1__Phi19-1_gp010__00010
Bact-VirKC821607.1__AGO47300.1__Phi19-1_gp010__00010
Identity
- Accession:
- KC821607 ↗
- Kingdom:
- phage
Quality
81.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Assiduviridae›
Cellubavirus›
Cellulophaga_phage_phi19:1
TaxID: 1327970
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-50
Domain cluster:
representative
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.86 | 76.0 | 6.84e-01 | 95.8% | 100.0% |
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.85 | 79.0 | 7.13e-01 | 100.0% | 83.9% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.85 | 74.0 | 6.30e-01 | 95.8% | 98.7% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.85 | 76.0 | 5.32e-01 | 100.0% | 33.1% |
| 3uj9A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.84 | 76.0 | 4.65e-01 | 100.0% | 19.8% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.83 | 77.0 | 6.19e-01 | 100.0% | 60.5% |
| 3sfvB02 | 6.10.140.2010 | Special › Helix non-globular › Helix Hairpins › | 0.83 | 77.0 | 4.92e-01 | 100.0% | 26.0% |
| 2cazC00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.82 | 74.0 | 6.72e-01 | 100.0% | 79.7% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.82 | 75.0 | 6.49e-01 | 100.0% | 85.9% |
| 4fvmA06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.82 | 71.0 | 7.13e-01 | 93.8% | 100.0% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.81 | 73.0 | 6.83e-01 | 100.0% | 84.5% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.81 | 73.0 | 4.56e-01 | 100.0% | 21.5% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 74.0 | 6.89e-01 | 100.0% | 86.2% |
| 2qf9A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.81 | 71.0 | 4.91e-01 | 100.0% | 32.7% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 67.0 | 6.16e-01 | 100.0% | 71.4% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 73.0 | 6.66e-01 | 100.0% | 77.4% |
| 2e5yA02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.80 | 63.0 | 6.50e-01 | 87.5% | 100.0% |
| 2dnxA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 70.0 | 5.09e-01 | 100.0% | 36.9% |
| 4ceiA03 | 6.10.250.2380 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.79 | 70.0 | 5.30e-01 | 100.0% | 83.0% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.79 | 71.0 | 6.64e-01 | 100.0% | 89.7% |
| 1cm5A00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.78 | 70.0 | 3.81e-01 | 100.0% | 6.6% |
| 2q1kA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.77 | 68.0 | 6.70e-01 | 100.0% | 98.1% |
| 2i0mA02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.75 | 63.0 | 5.01e-01 | 100.0% | 46.5% |
| 4e4eA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.74 | 65.0 | 5.69e-01 | 100.0% | 66.2% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.74 | 65.0 | 5.75e-01 | 100.0% | 67.6% |
| 1a36A04 | 1.10.132.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.74 | 62.0 | 4.24e-01 | 100.0% | 26.9% |
| 1b04A03 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.74 | 66.0 | 6.06e-01 | 100.0% | 77.4% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.73 | 62.0 | 4.98e-01 | 100.0% | 63.3% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 59.0 | 5.17e-01 | 100.0% | 59.2% |
| 1h6gA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.72 | 62.0 | 4.68e-01 | 100.0% | 40.3% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.71 | 61.0 | 5.53e-01 | 100.0% | 92.5% |
| 4l8jA04 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.71 | 61.0 | 5.74e-01 | 100.0% | 81.4% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.70 | 59.0 | 5.16e-01 | 100.0% | 63.5% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.69 | 59.0 | 5.54e-01 | 100.0% | 80.0% |
| 4xpwA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.69 | 59.0 | 4.36e-01 | 100.0% | 83.2% |
| 3vnxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 56.0 | 3.82e-01 | 100.0% | 32.8% |
| 2f2gA00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.67 | 52.0 | 3.57e-01 | 100.0% | 21.9% |
| 4q4hB01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.66 | 54.0 | 3.32e-01 | 100.0% | 14.4% |
| 2hepA00 | 1.10.287.540 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.66 | 51.0 | 5.38e-01 | 91.7% | 100.0% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 54.0 | 4.36e-01 | 100.0% | 50.9% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.66 | 52.0 | 4.56e-01 | 100.0% | 56.5% |
| 1zbtA01 | 6.10.140.1950 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 53.0 | 4.62e-01 | 100.0% | 57.8% |
| 7dukB01 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 49.0 | 5.03e-01 | 95.8% | 97.8% |
| 5mmjb02 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.63 | 50.0 | 4.94e-01 | 95.8% | 86.5% |
| 3gnlB02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 52.0 | 4.75e-01 | 100.0% | 72.1% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.62 | 53.0 | 3.99e-01 | 100.0% | 84.9% |
| 2jdiG01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.62 | 48.0 | 4.61e-01 | 100.0% | 77.0% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.61 | 51.0 | 3.23e-01 | 93.8% | 18.7% |
| 1n1cA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.61 | 48.0 | 4.25e-01 | 100.0% | 58.5% |
| 3deeA01 | 1.10.150.690 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 | 0.61 | 43.0 | 3.71e-01 | 87.5% | 44.2% |
| 5b1aC01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 50.0 | 4.58e-01 | 100.0% | 69.1% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.59 | 48.0 | 4.12e-01 | 100.0% | 55.6% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 51.0 | 4.27e-01 | 100.0% | 71.8% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3206976 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.88 | 82.0 | 5.98e-01 | 100.0% | 41.7% |
| 4936790 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.85 | 79.0 | 5.96e-01 | 100.0% | 85.7% |
| 4667192 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.85 | 79.0 | 6.13e-01 | 100.0% | 50.5% |
| 4370630 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.85 | 78.0 | 6.21e-01 | 100.0% | 53.3% |
| 3330916 | 3846.1.1.0 ↗ | alpha bundles › IcmR › IcmR › IcmR | 0.84 | 77.0 | 7.36e-01 | 100.0% | 87.3% |
| 4505128 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.84 | 77.0 | 6.11e-01 | 100.0% | 53.3% |
| 3840893 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.84 | 75.0 | 6.55e-01 | 100.0% | 67.1% |
| 4031046 | 192.7.1.1 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FemAB | 0.84 | 77.0 | 7.10e-01 | 100.0% | 80.0% |
| 3650120 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.83 | 77.0 | 4.63e-01 | 100.0% | 16.8% |
| 2720300 | 192.22.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ral binding domain of RLIP76 › Ral binding domain of RLIP76 › RLIP76_Ral-bd | 0.83 | 77.0 | 7.55e-01 | 100.0% | 94.1% |
| 5056869 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.83 | 75.0 | 4.99e-01 | 100.0% | 99.4% |
| 3598650 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.83 | 76.0 | 5.94e-01 | 100.0% | 50.5% |
| 3987802 | 192.7.1.1 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FemAB | 0.83 | 76.0 | 6.99e-01 | 100.0% | 80.0% |
| 3504099 | 3846.1.1.0 ↗ | alpha bundles › IcmR › IcmR › IcmR | 0.83 | 72.0 | 7.48e-01 | 93.8% | 100.0% |
| 4497069 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.82 | 74.0 | 5.67e-01 | 100.0% | 59.0% |
| 3513582 | 192.8.1.36 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › M_domain | 0.82 | 76.0 | 5.64e-01 | 100.0% | 43.6% |
| 3386800 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.82 | 75.0 | 6.94e-01 | 100.0% | 80.0% |
| 5076982 | 611.2.1.0 ↗ | alpha bundles › N-cbl like › N-terminal domain of cbl (N-cbl) › N-terminal domain of cbl (N-cbl) | 0.81 | 72.0 | 5.56e-01 | 100.0% | 45.7% |
| 4295915 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.81 | 74.0 | 5.29e-01 | 100.0% | 36.9% |
| 3207569 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.81 | 75.0 | 4.81e-01 | 100.0% | 24.0% |
| 4028334 | 2004.1.1.505 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 | 0.81 | 72.0 | 4.32e-01 | 100.0% | 15.5% |
| 4009505 | 7079.1.1.1 ↗ | a+b complex topology › Phage tail fiber assembly protein › Phage tail fiber assembly protein › Phage tail fiber assembly protein › Caudo_TAP | 0.81 | 73.0 | 6.40e-01 | 100.0% | 68.6% |
| 4007897 | 3809.1.1.2 ↗ | alpha bundles › Uncharacterized protein CV0426 › Uncharacterized protein CV0426 › Uncharacterized protein CV0426 › Caudo_TAP | 0.80 | 73.0 | 6.39e-01 | 100.0% | 68.6% |
| 4674 | 192.7.1.1 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FemAB | 0.80 | 73.0 | 6.55e-01 | 100.0% | 73.8% |
| 4588350 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.79 | 68.0 | 4.82e-01 | 100.0% | 58.7% |
| 3201381 | 192.8.1.139 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Fung_rhodopsin | 0.78 | 69.0 | 5.94e-01 | 100.0% | 64.0% |
| 4846660 | 192.18.1.1 ↗ | alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like › T3SS_needle_F | 0.76 | 66.0 | 5.78e-01 | 100.0% | 64.9% |
| 3416429 | 2004.1.1.442 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21 | 0.76 | 66.0 | 3.84e-01 | 100.0% | 12.0% |
| 3189035 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.71 | 61.0 | 5.32e-01 | 100.0% | 62.7% |
| 2388286 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.69 | 58.0 | 5.22e-01 | 100.0% | 66.7% |
| 3627873 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.67 | 53.0 | 4.83e-01 | 100.0% | 64.0% |
| 5029347 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.66 | 53.0 | 3.12e-01 | 100.0% | 10.0% |
| 3631582 | 604.7.1.0 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A | 0.65 | 52.0 | 4.34e-01 | 100.0% | 48.0% |
| 4428739 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.65 | 51.0 | 3.35e-01 | 100.0% | 18.1% |
| 3649223 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.63 | 50.0 | 3.98e-01 | 100.0% | 41.7% |