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KC821611.1__AGO47818.1__Phi46-1_gp07__00007

Bact-Vir

KC821611.1__AGO47818.1__Phi46-1_gp07__00007

Identity

Accession:
KC821611 ↗
Kingdom:
phage

Quality

81.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Cellulophaga_phage_phi46:1

TaxID: 1327974

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-193_334-363
PDB
Domain cluster: rep: KC821618.1__AGO48403.1__Phi10-1_gp062__00062__D33-74_121-234_364-393
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kdrA02 3.40.140.120 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › 0.70 41.0 5.12e-01 77.2% 92.9%
4do8A00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.61 23.0 3.77e-01 71.8% 100.0%
4h4nA00 2.60.40.3750 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 17.0 3.27e-01 82.0% 87.1%
3zoqC00 6.20.250.30 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.52 17.0 2.94e-01 74.8% 100.0%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3949049 4056.1.1.0 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.86 34.0 5.59e-01 85.4% 95.2%
3964370 4056.1.1.0 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.74 30.0 4.70e-01 84.0% 92.9%
3942943 4056.1.1.1 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_prot_Gp6 0.66 55.0 5.12e-01 86.4% 98.0%
5014975 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 19.0 2.89e-01 81.6% 75.0%
3898952 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.52 19.0 2.96e-01 82.5% 84.0%
5052958 821.1.1.0 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.51 20.0 3.12e-01 94.2% 90.0%
D2 high residues 199-275
PDB