←Back to structures
KC821611.1__AGO47825.1__Phi46-1_gp14__00014
Bact-VirKC821611.1__AGO47825.1__Phi46-1_gp14__00014
Identity
- Accession:
- KC821611 ↗
- Kingdom:
- phage
Quality
79.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-110
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vxgA02 | 1.10.220.100 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › conserved c-terminal region of ge- 1 | 0.68 | 44.0 | 4.83e-01 | 100.0% | 82.4% |
| 1m7wA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.63 | 51.0 | 4.03e-01 | 86.1% | 85.7% |
| 2o8pA00 | 1.20.190.20 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain | 0.63 | 46.0 | 3.64e-01 | 100.0% | 37.9% |
| 6tkyA03 | 1.20.58.740 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C | 0.60 | 55.0 | 5.28e-01 | 100.0% | 88.5% |
| 4c0eA01 | 1.25.40.790 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.59 | 43.0 | 3.20e-01 | 100.0% | 29.3% |
| 1juqC00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 40.0 | 3.64e-01 | 100.0% | 51.7% |
| 1v9dB00 | 1.20.58.2220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Formin, FH2 domain | 0.57 | 50.0 | 3.57e-01 | 96.3% | 59.2% |
| 3vprA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 50.0 | 4.58e-01 | 99.1% | 91.0% |
| 5tgtA02 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.55 | 36.0 | 3.50e-01 | 77.8% | 57.7% |
| 3gyuA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.55 | 43.0 | 3.43e-01 | 86.1% | 81.8% |
| 5a0uA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.53 | 47.0 | 2.85e-01 | 100.0% | 28.4% |
| 4g12A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 48.0 | 4.29e-01 | 100.0% | 94.0% |
| 1wkbA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.53 | 35.0 | 3.38e-01 | 79.6% | 59.5% |
| 8sppA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 45.0 | 3.23e-01 | 99.1% | 77.9% |
| 2b8iA00 | 1.20.1280.100 | Mainly Alpha › Up-down Bundle › Monooxygenase › Pas factor, saposin domain | 0.52 | 30.0 | 3.39e-01 | 76.9% | 76.6% |
| 2fzfA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.51 | 41.0 | 3.72e-01 | 87.0% | 80.7% |
| 4id0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 36.0 | 3.65e-01 | 100.0% | 72.3% |
| 6vqqA01 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.50 | 43.0 | 3.36e-01 | 100.0% | 75.8% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3476692 | 109.4.1.603 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TAF1_subA | 0.61 | 48.0 | 3.50e-01 | 100.0% | 30.8% |
| 3576107 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.61 | 45.0 | 4.38e-01 | 88.0% | 70.0% |
| 4253999 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.59 | 49.0 | 4.87e-01 | 96.3% | 87.0% |
| 3701064 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.59 | 39.0 | 3.43e-01 | 77.8% | 45.6% |
| 3575934 | 109.4.1.891 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_HEATR1 | 0.57 | 52.0 | 3.86e-01 | 100.0% | 53.0% |
| 4290562 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.56 | 45.0 | 4.55e-01 | 93.5% | 86.4% |
| 3701383 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 48.0 | 4.00e-01 | 96.3% | 54.9% |
| 3288323 | 5048.1.1.1 ↗ | alpha complex topology › Aquaporin-like › Aquaporin-like › Aquaporin-like › MIP | 0.55 | 48.0 | 3.75e-01 | 100.0% | 47.2% |
| 3653697 | 5069.1.1.7 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_B561 | 0.54 | 44.0 | 3.57e-01 | 91.7% | 78.2% |
| 3388186 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.53 | 43.0 | 3.49e-01 | 87.0% | 66.2% |
| 3463860 | 109.4.1.84 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › API5 | 0.53 | 46.0 | 3.37e-01 | 100.0% | 40.9% |
| 5070839 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.52 | 35.0 | 2.75e-01 | 82.4% | 31.3% |
| 3971251 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.52 | 41.0 | 3.41e-01 | 86.1% | 65.0% |
| 3263203 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.52 | 36.0 | 3.86e-01 | 87.0% | 82.1% |
| 3538350 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.51 | 38.0 | 3.55e-01 | 77.8% | 68.1% |
| 1879630 | 601.44.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in anaphase-promoting complex subunit 4 › Helical bundle domain in anaphase-promoting complex subunit 4 › ANAPC4 | 0.50 | 40.0 | 2.99e-01 | 87.0% | 46.6% |
| 3583608 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.50 | 36.0 | 2.88e-01 | 75.9% | 45.7% |