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KC821611.1__AGO47827.1__Phi46-1_gp16__00016
Bact-VirKC821611.1__AGO47827.1__Phi46-1_gp16__00016
Identity
- Accession:
- KC821611 ↗
- Kingdom:
- phage
Quality
91.5
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-104
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1uhsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 38.0 | 4.78e-01 | 71.9% | 90.7% |
| 1tr8A02 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.66 | 27.0 | 4.04e-01 | 81.2% | 92.3% |
| 2mw8A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 37.0 | 4.20e-01 | 74.0% | 80.6% |
| 3pvlA03 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.60 | 40.0 | 3.75e-01 | 74.0% | 55.1% |
| 1kv9A02 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.59 | 44.0 | 4.38e-01 | 80.2% | 87.4% |
| 1lfuP00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 36.0 | 3.84e-01 | 76.0% | 73.2% |
| 2mgqA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 37.0 | 4.22e-01 | 76.0% | 92.6% |
| 1x2mA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 32.0 | 3.81e-01 | 71.9% | 92.6% |
| 5d0yA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.57 | 40.0 | 3.46e-01 | 74.0% | 83.2% |
| 2dn0A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 37.0 | 4.06e-01 | 85.4% | 86.8% |
| 1bgfA00 | 1.10.532.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain | 0.54 | 38.0 | 3.51e-01 | 72.9% | 74.2% |
| 2da7A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 30.0 | 3.41e-01 | 74.0% | 71.8% |
| 4xomB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.53 | 38.0 | 2.91e-01 | 74.0% | 48.3% |
| 5jy1A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 36.0 | 2.63e-01 | 75.0% | 26.3% |
| 1b72A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.52 | 32.0 | 3.58e-01 | 75.0% | 86.8% |
| 3gvcA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 36.0 | 2.67e-01 | 75.0% | 28.6% |
| 6oz7B00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 34.0 | 2.53e-01 | 74.0% | 27.5% |
| 3h7aA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 34.0 | 2.59e-01 | 72.9% | 30.7% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3231777 | 101.1.1.527 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_71 | 0.72 | 37.0 | 4.93e-01 | 71.9% | 96.0% |
| 3932555 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.68 | 37.0 | 4.12e-01 | 70.8% | 66.7% |
| 3644457 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 38.0 | 3.93e-01 | 72.9% | 57.8% |
| 3484058 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 38.0 | 4.06e-01 | 74.0% | 62.4% |
| 3218375 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 36.0 | 4.62e-01 | 71.9% | 96.4% |
| 3518706 | 197.1.1.0 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like | 0.64 | 44.0 | 4.06e-01 | 74.0% | 54.4% |
| 4282585 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.64 | 38.0 | 4.06e-01 | 77.1% | 67.1% |
| 5039817 | 7014.1.1.2 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE | 0.60 | 45.0 | 4.10e-01 | 79.2% | 99.2% |
| 3507888 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.57 | 39.0 | 4.43e-01 | 99.0% | 90.7% |
| 4613763 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.57 | 39.0 | 3.98e-01 | 99.0% | 71.6% |
| 3767171 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.57 | 36.0 | 3.63e-01 | 76.0% | 63.2% |
| 3893980 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 35.0 | 4.17e-01 | 79.2% | 100.0% |
| 3889817 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.55 | 34.0 | 3.65e-01 | 76.0% | 72.5% |
| 4996186 | 604.39.1.6 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › QueT | 0.54 | 39.0 | 3.20e-01 | 76.0% | 73.9% |
| 4466880 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.53 | 39.0 | 3.37e-01 | 78.1% | 74.4% |
| 3890041 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.53 | 36.0 | 3.47e-01 | 99.0% | 61.8% |
| 5040334 | 5069.1.3.133 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › Sm_multidrug_ex | 0.52 | 43.0 | 3.57e-01 | 91.7% | 59.4% |
| 3904295 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.51 | 31.0 | 3.71e-01 | 84.4% | 89.2% |
| 3218952 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.51 | 31.0 | 3.63e-01 | 71.9% | 98.3% |
| 3217696 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 33.0 | 3.88e-01 | 100.0% | 100.0% |
| 3878076 | 197.1.1.1 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M | 0.50 | 33.0 | 3.21e-01 | 71.9% | 56.5% |
D2
high
residues 112-174
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ze7A02 | 1.10.287.890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 0.66 | 49.0 | 4.24e-01 | 81.0% | 73.5% |
| 2ltuA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.64 | 44.0 | 4.42e-01 | 73.0% | 88.7% |
| 3vfcA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.57 | 38.0 | 2.94e-01 | 71.4% | 29.5% |
| 4bfmA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.53 | 44.0 | 2.79e-01 | 88.9% | 95.5% |
| 3dbgA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 45.0 | 2.77e-01 | 98.4% | 31.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3271918 | 101.1.1.201 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Bot1p | 0.68 | 42.0 | 4.07e-01 | 79.4% | 57.1% |
| 3451010 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.66 | 50.0 | 4.28e-01 | 81.0% | 94.0% |
| 3347020 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.65 | 44.0 | 4.76e-01 | 71.4% | 83.6% |
| 3884801 | 2004.1.1.112 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-mevalo_kinase | 0.64 | 47.0 | 3.30e-01 | 77.8% | 87.7% |
| 3494824 | 2004.1.1.112 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-mevalo_kinase | 0.57 | 43.0 | 3.09e-01 | 82.5% | 48.2% |
| 3754251 | 2004.1.1.112 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-mevalo_kinase | 0.57 | 43.0 | 3.16e-01 | 85.7% | 40.7% |
| 3214818 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.57 | 44.0 | 2.76e-01 | 87.3% | 20.8% |
| 3998417 | 2004.1.1.112 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-mevalo_kinase | 0.50 | 38.0 | 2.91e-01 | 87.3% | 47.4% |