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KC821618.1__AGO48372.1__Phi10-1_gp031__00031

Bact-Vir

KC821618.1__AGO48372.1__Phi10-1_gp031__00031

Identity

Accession:
KC821618 ↗
Kingdom:
phage

Quality

97.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Assiduviridae› Cebadecemvirus› Cellulophaga_phage_phi10:1

TaxID: 1327981

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-56
PDB
Domain cluster: rep: LacPavin_0818_WC45_scaffold_160996_curated_closed_complete_prodigal-single.1__X__X__00225__D11-60
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 69.0 6.44e-01 100.0% 88.2%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 67.0 5.74e-01 100.0% 62.8%
2krsA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 67.0 6.50e-01 98.2% 100.0%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 64.0 6.35e-01 100.0% 93.0%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 64.0 6.11e-01 100.0% 89.4%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 64.0 5.93e-01 100.0% 80.0%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 63.0 5.87e-01 100.0% 80.0%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 58.0 5.90e-01 100.0% 94.3%
1ri9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 61.0 5.52e-01 98.2% 72.7%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 63.0 6.16e-01 100.0% 94.9%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 54.0 5.70e-01 96.4% 100.0%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 54.0 5.10e-01 100.0% 69.1%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 53.0 5.07e-01 100.0% 69.7%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 62.0 5.99e-01 100.0% 90.3%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 62.0 6.06e-01 100.0% 93.2%
1dj7B00 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.69 60.0 5.52e-01 100.0% 93.2%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 57.0 5.77e-01 100.0% 98.1%
2i0nA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 61.0 6.05e-01 100.0% 96.5%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.69 52.0 5.24e-01 100.0% 85.2%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 51.0 5.09e-01 100.0% 82.1%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 58.0 5.53e-01 100.0% 86.6%
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 57.0 5.64e-01 100.0% 91.7%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 54.0 5.01e-01 100.0% 70.4%
6cnhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 44.0 3.90e-01 92.7% 50.0%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 51.0 5.00e-01 100.0% 83.9%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.63 50.0 4.97e-01 100.0% 86.2%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 50.0 4.73e-01 100.0% 72.9%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.62 53.0 5.15e-01 100.0% 88.9%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 48.0 4.20e-01 92.7% 94.3%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 45.0 4.43e-01 100.0% 77.4%
4p5nA00 2.30.30.1060 Mainly Beta › Roll › SH3 type barrels. › 0.59 52.0 4.71e-01 100.0% 77.0%
4l68A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 45.0 3.68e-01 89.1% 92.7%
4by6C00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.56 38.0 2.77e-01 100.0% 22.7%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 40.0 4.06e-01 100.0% 85.5%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 39.0 3.90e-01 98.2% 76.3%
1xocA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 36.0 2.78e-01 78.2% 43.2%
6pfzD02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 41.0 2.80e-01 100.0% 47.9%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1821014 4.1.1.70 ↗ beta barrels › SH3 › SH3 › SH3 › Tsr0524-like 0.78 68.0 6.51e-01 100.0% 90.6%
5000308 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.78 59.0 6.22e-01 100.0% 93.9%
3486496 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 59.0 5.93e-01 100.0% 83.6%
4208181 4.1.1.70 ↗ beta barrels › SH3 › SH3 › SH3 › Tsr0524-like 0.76 66.0 6.34e-01 100.0% 89.2%
4030850 4.1.1.165 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6501 0.76 66.0 5.67e-01 98.2% 62.4%
3514867 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 67.0 6.01e-01 100.0% 72.0%
3235419 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 65.0 6.37e-01 100.0% 88.3%
137916 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.75 68.0 6.45e-01 100.0% 93.8%
3419491 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 62.0 6.09e-01 100.0% 85.0%
4030603 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 65.0 6.07e-01 100.0% 77.9%
3480351 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 66.0 5.96e-01 100.0% 77.3%
3529708 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 66.0 5.97e-01 100.0% 74.7%
4001172 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.74 66.0 6.08e-01 100.0% 81.4%
2890675 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 64.0 6.15e-01 100.0% 84.4%
3485745 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 65.0 6.35e-01 100.0% 93.3%
3725260 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 66.0 6.05e-01 100.0% 80.0%
3905176 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 65.0 6.15e-01 100.0% 86.2%
3541996 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.73 63.0 4.34e-01 100.0% 28.4%
3784334 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.73 55.0 5.35e-01 100.0% 75.0%
3786430 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 54.0 5.65e-01 100.0% 90.0%
3924338 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 64.0 5.95e-01 100.0% 78.6%
3476178 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 58.0 4.55e-01 100.0% 41.7%
3484007 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 63.0 5.85e-01 100.0% 80.0%
3487936 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 63.0 5.84e-01 100.0% 78.6%
4874733 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 54.0 5.48e-01 100.0% 85.2%
3372822 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 62.0 5.62e-01 100.0% 73.3%
3793311 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 63.0 6.16e-01 100.0% 95.0%
3165077 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.71 62.0 5.74e-01 98.2% 87.1%
3782325 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 62.0 6.00e-01 100.0% 88.9%
3747790 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 59.0 5.97e-01 94.5% 96.4%
4998113 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.70 51.0 5.52e-01 96.4% 97.8%
4675879 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.70 60.0 3.88e-01 100.0% 23.8%
3846212 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 61.0 5.45e-01 100.0% 70.0%
3625555 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 60.0 6.05e-01 96.4% 100.0%
3550644 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 52.0 5.28e-01 100.0% 83.6%
3921563 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 60.0 5.34e-01 100.0% 70.0%
3507664 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 60.0 5.88e-01 100.0% 93.3%
3238405 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 52.0 5.22e-01 100.0% 83.6%
3936885 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 53.0 5.03e-01 96.4% 72.3%
3934126 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 58.0 5.64e-01 100.0% 86.7%
4376886 4.1.1.241 ↗ beta barrels › SH3 › SH3 › SH3 › NifZ 0.68 59.0 5.25e-01 100.0% 83.7%
4091771 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 56.0 5.51e-01 100.0% 85.0%
3926179 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 59.0 5.60e-01 100.0% 86.2%
3398496 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.66 50.0 5.01e-01 100.0% 83.6%
3564972 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 53.0 4.94e-01 100.0% 71.4%
3917372 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.66 51.0 4.66e-01 100.0% 64.0%
2427475 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 50.0 4.75e-01 100.0% 70.1%
4229837 4.1.1.354 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY, PF28930 0.65 58.0 4.00e-01 100.0% 38.9%
4629735 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 53.0 5.11e-01 100.0% 80.0%
3741680 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 50.0 5.04e-01 100.0% 89.1%
3933539 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 54.0 5.16e-01 100.0% 81.5%
5003743 2.14.1.6 ↗ beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › DUF3006 0.63 43.0 4.48e-01 70.9% 84.0%
3725153 4.1.1.286 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7072 0.63 50.0 4.49e-01 98.2% 61.3%
3712219 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.63 50.0 4.78e-01 100.0% 75.4%
4968336 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.63 48.0 3.10e-01 100.0% 17.1%
3619619 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 51.0 4.75e-01 100.0% 72.9%
4982354 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.62 52.0 5.02e-01 100.0% 81.5%
4302391 4.1.1.398 ↗ beta barrels › SH3 › SH3 › SH3 › YolD 0.62 48.0 4.62e-01 96.4% 75.4%
1408049 4.1.1.217 ↗ beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.62 53.0 4.03e-01 100.0% 52.9%
3926672 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 54.0 5.16e-01 100.0% 84.6%
5073368 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 50.0 4.72e-01 100.0% 77.1%
3591224 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 45.0 4.63e-01 100.0% 96.0%
3417981 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.57 45.0 2.85e-01 90.9% 47.0%
3805791 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.57 41.0 2.64e-01 80.0% 28.3%
4169393 2005.1.1.17 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.55 43.0 2.60e-01 100.0% 10.3%
None — 0.55 43.0 2.73e-01 100.0% 14.3%
4458401 375.1.1.17 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1f 0.55 43.0 2.87e-01 100.0% 19.3%
3955471 2003.1.2.58 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.53 42.0 2.60e-01 100.0% 33.1%
3578637 206.1.3.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.53 41.0 2.76e-01 98.2% 83.8%
3597608 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.52 43.0 3.22e-01 98.2% 76.9%
4300449 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.50 40.0 3.91e-01 100.0% 84.6%