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KC821622.1__AGO48791.1__Phi46-3_gp047__00047

Bact-Vir

KC821622.1__AGO48791.1__Phi46-3_gp047__00047

Identity

Accession:
KC821622 ↗
Kingdom:
phage

Quality

57.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pachyviridae› Bacelvirus› Cellulophaga_phage_phi46:3

TaxID: 1327985

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-69
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wzoA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.75 40.0 4.90e-01 100.0% 87.5%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 40.0 4.63e-01 100.0% 85.1%
3kbgA03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 43.0 4.60e-01 100.0% 82.1%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 36.0 3.63e-01 100.0% 60.9%
5uaoC00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 45.0 2.76e-01 94.1% 72.2%
2vouB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 40.0 2.80e-01 80.9% 86.7%
3f61A02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.54 39.0 3.02e-01 79.4% 64.9%
3i6dA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 44.0 3.42e-01 95.6% 51.0%
5jciA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 37.0 3.06e-01 77.9% 57.6%
5niiB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 40.0 2.99e-01 88.2% 79.7%
1l9fA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 42.0 3.15e-01 95.6% 60.3%
4k7zA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 38.0 2.78e-01 85.3% 82.6%
3aljA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 37.0 2.67e-01 79.4% 42.4%
1q1rA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 41.0 3.08e-01 95.6% 60.0%
2e5vA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 40.0 2.78e-01 94.1% 69.5%
3nlcA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 38.0 2.72e-01 85.3% 88.5%
1q1rA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 41.0 3.42e-01 95.6% 97.7%
3k7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 39.0 3.39e-01 85.3% 90.7%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3700745 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 45.0 5.11e-01 98.5% 86.0%
5054668 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 37.0 4.35e-01 100.0% 82.2%
3504834 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 44.0 4.69e-01 98.5% 82.8%
4517008 4.1.1.301 ↗ beta barrels › SH3 › SH3 › SH3 › MJ1316 0.62 42.0 4.04e-01 100.0% 60.0%
3289848 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.60 54.0 5.23e-01 100.0% 100.0%
None — 0.56 45.0 2.96e-01 95.6% 89.8%
3958929 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.54 45.0 3.61e-01 95.6% 77.9%
3788335 206.1.1.10 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase 0.54 39.0 2.43e-01 76.5% 45.6%
3510483 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.54 44.0 3.55e-01 95.6% 96.7%
4116255 2003.1.2.58 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.53 43.0 2.77e-01 97.1% 36.4%
3977992 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.52 41.0 3.17e-01 88.2% 73.9%
3634941 2485.1.1.19 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › L51_S25_CI-B8 0.52 36.0 3.27e-01 73.5% 94.7%
4929306 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.51 40.0 2.48e-01 83.8% 76.2%
3279017 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.51 40.0 2.58e-01 88.2% 39.7%
4030929 2003.1.2.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox 0.50 39.0 3.16e-01 88.2% 69.7%
None — 0.50 40.0 2.67e-01 89.7% 76.8%
D2 high residues 95-165
PDB