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KC821624.1__AGO48929.1__Phi14-2_gp051__00051
Bact-VirKC821624.1__AGO48929.1__Phi14-2_gp051__00051
Identity
- Accession:
- KC821624 ↗
- Kingdom:
- phage
Quality
64.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Crassvirales›
Steigviridae›
Akihdevirus›
Cellulophaga_phage_phi14:2
TaxID: 1327990
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-158_216-273
Domain cluster:
rep: Glutamine-fructose-6-phosphate_amidotransferase__NP_048448__Paramecium_bursaria_Chlorella_virus_1__10506__D3-231
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13522.12 best | GATase_6 | 29.5 | 9.30e-07 | 58.1% | 36.1% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6czfA01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.80 | 76.0 | 6.15e-01 | 100.0% | 75.4% |
| 1ao0A01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.78 | 75.0 | 6.17e-01 | 100.0% | 73.7% |
| 1xffA00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.78 | 74.0 | 6.72e-01 | 100.0% | 94.5% |
| 7ylzA01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.72 | 69.0 | 6.43e-01 | 100.0% | 100.0% |
| 1te5A00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.71 | 68.0 | 5.97e-01 | 99.5% | 99.6% |
| 1ct9A01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.67 | 65.0 | 6.39e-01 | 100.0% | 97.4% |
| 1yb3A00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.59 | 31.0 | 3.33e-01 | 89.1% | 55.8% |
| 3gmgA00 | 3.30.70.1880 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function DUF881 | 0.58 | 34.0 | 3.83e-01 | 91.8% | 72.7% |
| 1jelP00 | 3.30.1340.10 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › HPr-like | 0.55 | 27.0 | 3.69e-01 | 82.6% | 97.6% |
| 1yqhA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 23.0 | 3.00e-01 | 90.8% | 67.3% |
| 6v55A01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.51 | 27.0 | 3.41e-01 | 83.7% | 83.0% |
| 3pgvA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.50 | 29.0 | 3.69e-01 | 91.8% | 100.0% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4999227 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.82 | 79.0 | 6.93e-01 | 100.0% | 94.5% |
| 4947599 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.82 | 79.0 | 7.04e-01 | 100.0% | 94.7% |
| 3741900 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.81 | 78.0 | 6.80e-01 | 100.0% | 98.1% |
| 3280543 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.81 | 78.0 | 6.95e-01 | 100.0% | 97.1% |
| 5071630 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.81 | 77.0 | 6.97e-01 | 100.0% | 95.8% |
| 4954583 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.81 | 77.0 | 6.96e-01 | 100.0% | 96.2% |
| 5027645 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.81 | 77.0 | 6.74e-01 | 100.0% | 96.2% |
| 4994995 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.80 | 77.0 | 6.98e-01 | 100.0% | 97.4% |
| None | — | 0.80 | 77.0 | 6.90e-01 | 100.0% | 96.2% | |
| 3973007 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.80 | 77.0 | 6.78e-01 | 100.0% | 96.0% |
| 5077548 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.80 | 76.0 | 6.35e-01 | 100.0% | 98.3% |
| 3963395 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.80 | 76.0 | 6.71e-01 | 100.0% | 96.9% |
| 5001463 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.80 | 76.0 | 6.34e-01 | 100.0% | 99.3% |
| None | — | 0.80 | 76.0 | 6.92e-01 | 100.0% | 96.2% | |
| 5033976 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.80 | 76.0 | 6.88e-01 | 100.0% | 97.5% |
| 5032499 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.80 | 76.0 | 6.80e-01 | 100.0% | 97.1% |
| 4940798 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.79 | 76.0 | 6.80e-01 | 100.0% | 93.1% |
| 5013417 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.79 | 76.0 | 6.89e-01 | 100.0% | 96.2% |
| 4484517 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.79 | 76.0 | 6.71e-01 | 100.0% | 90.4% |
| 4991740 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.79 | 76.0 | 6.62e-01 | 100.0% | 98.1% |
| 3965213 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.79 | 76.0 | 6.45e-01 | 100.0% | 92.4% |
| 3963821 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.79 | 76.0 | 6.69e-01 | 100.0% | 89.6% |
| 4149445 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.79 | 76.0 | 6.75e-01 | 100.0% | 91.8% |
| 5081628 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.79 | 75.0 | 6.67e-01 | 100.0% | 93.6% |
| None | — | 0.79 | 75.0 | 6.85e-01 | 100.0% | 95.3% | |
| None | — | 0.79 | 75.0 | 6.78e-01 | 100.0% | 94.6% | |
| 4588679 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.78 | 75.0 | 6.71e-01 | 100.0% | 96.3% |
| 4947903 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.78 | 75.0 | 6.70e-01 | 100.0% | 93.1% |
| 4981026 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.78 | 75.0 | 6.74e-01 | 100.0% | 94.6% |
| 4147605 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.78 | 75.0 | 6.66e-01 | 100.0% | 93.2% |
| 3942872 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.78 | 74.0 | 6.53e-01 | 98.9% | 99.2% |
| 5016339 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.78 | 75.0 | 6.85e-01 | 100.0% | 97.8% |
| 4680317 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.78 | 75.0 | 6.80e-01 | 100.0% | 96.2% |
| 5041223 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.78 | 75.0 | 6.14e-01 | 100.0% | 98.4% |
| 4976025 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.78 | 75.0 | 6.66e-01 | 100.0% | 91.8% |
| 4928832 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.78 | 75.0 | 6.90e-01 | 100.0% | 97.3% |
| None | — | 0.78 | 75.0 | 6.71e-01 | 100.0% | 96.7% | |
| 4259223 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.78 | 75.0 | 6.77e-01 | 100.0% | 95.7% |
| 5027271 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.77 | 73.0 | 6.50e-01 | 98.9% | 99.6% |
| 4960069 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.77 | 75.0 | 6.82e-01 | 100.0% | 98.7% |
| 5081419 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.77 | 73.0 | 6.23e-01 | 98.4% | 99.3% |
| 3782814 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.76 | 73.0 | 6.08e-01 | 100.0% | 98.3% |
| 5054721 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.76 | 73.0 | 6.57e-01 | 100.0% | 97.1% |
| 5038401 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.75 | 72.0 | 6.07e-01 | 100.0% | 98.6% |
| 4977475 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.75 | 72.0 | 6.87e-01 | 100.0% | 98.1% |
| 5065071 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.75 | 72.0 | 6.84e-01 | 100.0% | 97.6% |
| 5004099 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.75 | 72.0 | 6.77e-01 | 100.0% | 97.2% |
| 5014594 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.74 | 71.0 | 6.79e-01 | 100.0% | 98.1% |
| 4986617 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.74 | 71.0 | 6.60e-01 | 100.0% | 95.9% |
| 4991735 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.74 | 71.0 | 6.50e-01 | 100.0% | 99.1% |
| 4928834 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.73 | 69.0 | 6.47e-01 | 100.0% | 97.7% |
| 5038391 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.71 | 68.0 | 6.44e-01 | 100.0% | 97.1% |
| 5032272 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.71 | 68.0 | 6.67e-01 | 100.0% | 98.5% |
| 5041669 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.71 | 68.0 | 6.50e-01 | 100.0% | 99.0% |
| 5010282 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.69 | 66.0 | 6.53e-01 | 100.0% | 98.4% |
| 3956567 | 304.148.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Rv1825/MT1873 › Uncharacterized protein Rv1825/MT1873 › DUF881 | 0.58 | 34.0 | 3.75e-01 | 91.8% | 69.3% |
| 4568147 | 322.1.1.1 ↗ | a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr | 0.57 | 29.0 | 3.87e-01 | 86.4% | 95.5% |
| 3164579 | 322.1.1.1 ↗ | a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr | 0.55 | 31.0 | 3.92e-01 | 98.9% | 94.3% |
| 162024 | 304.9.1.19 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › MARF1_RRM1 | 0.52 | 23.0 | 3.06e-01 | 94.6% | 76.0% |
D2
high
residues 360-533
D3
medium
residues 159-215_274-285
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ubtD00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.56 | 44.0 | 2.83e-01 | 89.9% | 81.6% |
| 3icaB00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 42.0 | 3.13e-01 | 89.9% | 84.0% |
| 1ym5A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.52 | 42.0 | 3.32e-01 | 94.2% | 82.9% |
| 3rosA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.51 | 42.0 | 3.24e-01 | 100.0% | 71.6% |
| 1ci9A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 43.0 | 2.78e-01 | 98.6% | 92.6% |
| 3tw6D02 | 3.10.600.10 | Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain | 0.50 | 36.0 | 3.61e-01 | 81.2% | 97.4% |
| 3hisA02 | 4.10.470.10 | Few Secondary Structures › Irregular › Ricin (A Subunit), domain 2 › Ricin (A Subunit), domain 2 | 0.50 | 32.0 | 3.09e-01 | 72.5% | 55.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4014690 | 7581.1.1.1 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N | 0.53 | 40.0 | 2.75e-01 | 82.6% | 68.5% |
| 3519143 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.50 | 43.0 | 2.86e-01 | 97.1% | 75.1% |