←Back to structures

KC821624.1__AGO48992.1__Phi14-2_gp114__00114

Bact-Vir

KC821624.1__AGO48992.1__Phi14-2_gp114__00114

Identity

Accession:
KC821624 ↗
Kingdom:
phage

Quality

81.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Crassvirales› Steigviridae› Akihdevirus› Cellulophaga_phage_phi14:2

TaxID: 1327990

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 45-106
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3oqiA00 3.40.50.11710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase 0.73 44.0 2.99e-01 80.6% 17.1%
2do7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.37e-01 95.2% 76.2%
2dodA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.65 55.0 5.09e-01 100.0% 76.8%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 48.0 4.33e-01 88.7% 73.9%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 45.0 4.07e-01 82.3% 82.2%
8a1gC01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.61 47.0 3.26e-01 83.9% 27.6%
1vkeB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.60 46.0 3.93e-01 85.5% 50.5%
2vklA00 1.20.59.10 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase 0.60 52.0 4.83e-01 95.2% 80.5%
5a48B00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.60 47.0 4.24e-01 95.2% 78.1%
1ykhA00 6.10.140.200 Special › Helix non-globular › Helix Hairpins › 0.58 42.0 3.66e-01 83.9% 50.5%
6lcuA02 1.10.10.470 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Maltooligosyl trehalose synthase; domain 4 0.56 43.0 3.76e-01 88.7% 62.9%
4u2vA02 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.56 48.0 4.50e-01 100.0% 82.5%
5afdA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 43.0 2.84e-01 90.3% 18.3%
1jt6A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 48.0 3.76e-01 100.0% 63.5%
1zp2A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.54 42.0 3.53e-01 87.1% 49.1%
2h7bA01 1.20.120.1110 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › TAFH/NHR1 domain 0.54 45.0 3.99e-01 100.0% 97.9%
2acxA01 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.52 42.0 2.96e-01 88.7% 36.1%
2oifB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 45.0 3.47e-01 100.0% 59.6%
1tu9A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 44.0 3.48e-01 95.2% 61.1%
3r84B00 6.10.280.160 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 0.52 44.0 4.05e-01 96.8% 71.2%
6ovqA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.51 42.0 2.79e-01 100.0% 39.4%
2wl8C00 1.20.120.900 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pex19, mPTS binding domain 0.51 44.0 3.62e-01 95.2% 58.7%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3927056 603.1.1.1 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin 0.75 54.0 3.64e-01 75.8% 31.9%
3550061 101.1.2.127 ↗ alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.73 65.0 5.49e-01 100.0% 63.8%
3785070 101.1.2.127 ↗ alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.73 65.0 5.51e-01 100.0% 64.4%
3598367 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 65.0 5.71e-01 100.0% 82.8%
3612970 101.1.2.127 ↗ alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.73 65.0 5.60e-01 100.0% 78.6%
3701463 101.1.2.127 ↗ alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.73 64.0 5.82e-01 100.0% 89.4%
3595754 101.1.2.127 ↗ alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.71 63.0 5.70e-01 100.0% 87.1%
3716703 101.1.2.127 ↗ alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.71 62.0 5.82e-01 96.8% 98.7%
4057625 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 56.0 5.88e-01 93.5% 98.2%
3614685 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.71 56.0 5.86e-01 93.5% 98.2%
4025713 101.1.2.127 ↗ alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.71 58.0 5.55e-01 93.5% 83.8%
3726085 101.1.2.127 ↗ alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.69 60.0 5.43e-01 100.0% 71.8%
3705220 101.1.2.127 ↗ alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.68 59.0 5.38e-01 100.0% 77.6%
4486889 101.1.1.51 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Slx4 0.68 57.0 5.40e-01 96.8% 94.7%
5049207 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 52.0 5.14e-01 85.5% 96.9%
3414016 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.65 44.0 3.50e-01 71.0% 70.0%
5005257 2.21.1.0 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.64 53.0 4.02e-01 100.0% 40.0%
5074272 247.1.1.1 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.64 57.0 3.65e-01 100.0% 23.4%
4022486 101.1.2.374 ↗ alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.64 53.0 4.82e-01 100.0% 94.4%
4026719 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 54.0 4.34e-01 96.8% 60.8%
3761824 101.1.1.21 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 0.63 50.0 4.91e-01 93.5% 94.3%
4391985 101.1.2.137 ↗ alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.63 48.0 4.06e-01 90.3% 60.8%
3331372 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.62 48.0 4.30e-01 88.7% 60.0%
4938388 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.62 47.0 3.21e-01 85.5% 25.0%
3588754 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.61 54.0 3.81e-01 100.0% 32.8%
3952920 3625.1.1.1 ↗ alpha bundles › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain › Cmr2_hel_dom2 0.56 40.0 3.69e-01 77.4% 100.0%
5075956 2006.1.1.18 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.56 48.0 3.23e-01 95.2% 39.6%
3583002 101.1.2.265 ↗ alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.55 42.0 4.13e-01 90.3% 95.7%
3925671 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.53 42.0 4.01e-01 95.2% 87.5%
4456370 5086.1.1.99 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ApoL 0.52 46.0 4.01e-01 100.0% 65.6%