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KC821626.1__AGO49119.1__Phi39-1_gp04__00004
Bact-VirKC821626.1__AGO49119.1__Phi39-1_gp04__00004
Identity
- Accession:
- KC821626 ↗
- Kingdom:
- phage
Quality
71.3
mean pLDDT
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 54-140
Domain cluster:
rep: OP484857.1__UYE95721.1__HAAEEKHM_00001__00001__D29-141
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yfaB01 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.77 | 59.0 | 5.26e-01 | 94.3% | 58.8% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.75 | 55.0 | 5.51e-01 | 77.0% | 78.9% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.72 | 54.0 | 3.83e-01 | 78.2% | 30.1% |
| 1uurA01 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.72 | 54.0 | 4.92e-01 | 78.2% | 65.5% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 52.0 | 4.84e-01 | 78.2% | 83.5% |
| 1nu7D02 | 1.20.120.760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Staphylcoagulase, helix bundle, domain 2 | 0.69 | 44.0 | 3.88e-01 | 78.2% | 43.8% |
| 1dofA01 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.69 | 60.0 | 4.28e-01 | 94.3% | 36.1% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.68 | 59.0 | 5.54e-01 | 94.3% | 94.4% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 49.0 | 4.82e-01 | 79.3% | 72.8% |
| 7vwtA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.67 | 42.0 | 2.91e-01 | 78.2% | 17.8% |
| 4hyjA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.66 | 60.0 | 4.32e-01 | 98.9% | 41.9% |
| 6b04C00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.66 | 59.0 | 3.96e-01 | 100.0% | 50.4% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 50.0 | 4.89e-01 | 80.5% | 92.6% |
| 5fq4A00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.66 | 49.0 | 3.07e-01 | 79.3% | 86.2% |
| 1h7cA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 48.0 | 4.59e-01 | 78.2% | 67.0% |
| 4od4A01 | 1.10.357.140 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › UbiA prenyltransferase | 0.65 | 59.0 | 4.85e-01 | 100.0% | 60.9% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 48.0 | 4.48e-01 | 78.2% | 93.4% |
| 7wu7501 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 48.0 | 4.22e-01 | 78.2% | 96.8% |
| 3vbbE01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.65 | 58.0 | 5.22e-01 | 97.7% | 95.0% |
| 3llwD00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.64 | 57.0 | 3.99e-01 | 100.0% | 41.5% |
| 3mekA04 | 1.25.40.970 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 36.0 | 3.80e-01 | 87.4% | 61.3% |
| 3p5pA03 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.63 | 57.0 | 3.89e-01 | 100.0% | 81.3% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.63 | 46.0 | 4.73e-01 | 79.3% | 83.5% |
| 7dwqL01 | 1.20.1240.10 | Mainly Alpha › Up-down Bundle › Photosystem 1 Reaction Centre Subunit Xi; Chain: L; › Photosystem I PsaL, reaction centre subunit XI | 0.62 | 46.0 | 4.06e-01 | 77.0% | 57.6% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.62 | 52.0 | 4.76e-01 | 94.3% | 72.0% |
| 4fzsA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.62 | 54.0 | 4.03e-01 | 94.3% | 81.8% |
| 4wk5A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.62 | 54.0 | 3.83e-01 | 95.4% | 79.3% |
| 2q12A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.61 | 49.0 | 3.66e-01 | 89.7% | 64.5% |
| 4qxdA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.61 | 44.0 | 3.57e-01 | 74.7% | 97.5% |
| 3ejnA03 | 1.20.120.840 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SusD-like, tetratrico peptide repeats domain | 0.61 | 38.0 | 3.51e-01 | 88.5% | 49.5% |
| 1auwA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.61 | 53.0 | 3.86e-01 | 94.3% | 43.9% |
| 3cazB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.61 | 50.0 | 3.85e-01 | 92.0% | 74.8% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.60 | 44.0 | 4.56e-01 | 78.2% | 84.1% |
| 1oe8A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 45.0 | 4.08e-01 | 86.2% | 57.3% |
| 3pltA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.60 | 52.0 | 3.97e-01 | 98.9% | 71.0% |
| 4nqiD00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.59 | 49.0 | 3.66e-01 | 93.1% | 71.1% |
| 8a1gC01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.58 | 51.0 | 4.05e-01 | 98.9% | 82.3% |
| 6g94A00 | 1.20.950.20 | Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C | 0.58 | 54.0 | 4.20e-01 | 98.9% | 59.9% |
| 4hd1A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.58 | 51.0 | 3.69e-01 | 100.0% | 48.7% |
| 1f0jA00 | 1.10.1300.10 | Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | 0.57 | 49.0 | 3.35e-01 | 100.0% | 76.6% |
| 3ihvA01 | 1.25.40.890 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 50.0 | 4.10e-01 | 100.0% | 59.1% |
| 3swhA01 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.56 | 48.0 | 3.97e-01 | 97.7% | 78.2% |
| 4n1yB00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.56 | 50.0 | 3.68e-01 | 100.0% | 52.4% |
| 1m6nA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.54 | 45.0 | 3.83e-01 | 92.0% | 57.8% |
| 1hi9A01 | 3.40.50.10780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dipeptide transport protein | 0.53 | 36.0 | 2.74e-01 | 90.8% | 30.8% |
| 1phkA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.53 | 47.0 | 3.69e-01 | 98.9% | 67.2% |
| 4krdA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.53 | 47.0 | 3.55e-01 | 98.9% | 90.9% |
| 5ts9B00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.53 | 46.0 | 3.77e-01 | 97.7% | 78.9% |
| 6tuaA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.52 | 38.0 | 2.96e-01 | 74.7% | 90.1% |
| 2fji101 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.51 | 45.0 | 3.45e-01 | 100.0% | 78.9% |
| 3pg1A02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.51 | 35.0 | 2.68e-01 | 72.4% | 68.4% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 37.0 | 3.29e-01 | 77.0% | 83.9% |
| 5d9hA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.50 | 43.0 | 3.30e-01 | 95.4% | 66.8% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030787 | 605.1.1.303 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Terminase_4 | 0.90 | 80.0 | 7.62e-01 | 100.0% | 82.0% |
| 4033043 | 616.1.1.41 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › Terminase_4 | 0.81 | 67.0 | 6.61e-01 | 87.4% | 86.7% |
| 3411883 | 604.1.1.63 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_SESTD1 | 0.78 | 49.0 | 4.38e-01 | 75.9% | 46.7% |
| 3321310 | 603.1.1.5 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N | 0.75 | 56.0 | 4.92e-01 | 77.0% | 60.0% |
| None | — | 0.75 | 60.0 | 4.33e-01 | 83.9% | 37.3% | |
| 5004297 | 4275.1.1.0 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like | 0.74 | 64.0 | 6.00e-01 | 100.0% | 78.1% |
| 5028061 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.74 | 56.0 | 5.53e-01 | 78.2% | 83.3% |
| 3715891 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.74 | 56.0 | 4.39e-01 | 78.2% | 41.2% |
| 3630462 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.74 | 55.0 | 4.65e-01 | 78.2% | 66.4% |
| 4940192 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.74 | 55.0 | 4.99e-01 | 78.2% | 65.8% |
| 3684835 | 3712.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Med11 | 0.73 | 55.0 | 5.36e-01 | 78.2% | 78.9% |
| 3573843 | 3291.1.1.95 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Nas2_N | 0.73 | 55.0 | 4.60e-01 | 78.2% | 53.6% |
| 3702706 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.73 | 54.0 | 5.66e-01 | 78.2% | 85.0% |
| 4022306 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.72 | 54.0 | 4.45e-01 | 78.2% | 82.7% |
| 4178886 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.72 | 54.0 | 5.16e-01 | 78.2% | 79.0% |
| 3402974 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.72 | 54.0 | 4.40e-01 | 78.2% | 48.4% |
| 5032886 | 2004.1.1.293 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 | 0.72 | 54.0 | 3.16e-01 | 78.2% | 46.6% |
| 3337031 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.72 | 54.0 | 4.17e-01 | 78.2% | 43.9% |
| 3487699 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.72 | 55.0 | 3.89e-01 | 81.6% | 28.6% |
| 4662222 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.72 | 54.0 | 4.77e-01 | 78.2% | 65.0% |
| 3401140 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.72 | 53.0 | 3.28e-01 | 77.0% | 14.9% |
| 3657504 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.72 | 53.0 | 4.55e-01 | 78.2% | 71.1% |
| 3933404 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.71 | 53.0 | 4.39e-01 | 78.2% | 52.7% |
| 5012473 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.71 | 53.0 | 4.90e-01 | 78.2% | 77.3% |
| 5036014 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.71 | 53.0 | 5.17e-01 | 78.2% | 94.7% |
| 3771989 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.71 | 53.0 | 4.53e-01 | 78.2% | 79.3% |
| 5002054 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.71 | 59.0 | 4.83e-01 | 88.5% | 70.0% |
| 3538954 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.71 | 53.0 | 3.60e-01 | 78.2% | 54.3% |
| 3710532 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.70 | 51.0 | 4.81e-01 | 75.9% | 97.1% |
| 4025072 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.70 | 52.0 | 4.75e-01 | 78.2% | 80.9% |
| 4025655 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.70 | 52.0 | 5.10e-01 | 78.2% | 82.1% |
| 3790375 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.70 | 52.0 | 4.60e-01 | 78.2% | 65.6% |
| 4304766 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.70 | 53.0 | 4.48e-01 | 79.3% | 56.4% |
| 4948599 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.70 | 52.0 | 5.19e-01 | 78.2% | 78.9% |
| 4136919 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.70 | 52.0 | 4.01e-01 | 78.2% | 36.8% |
| 4986986 | 3633.1.1.0 ↗ | alpha duplicates or obligate multimers › Haptoglobin-hemoglobin receptor › Haptoglobin-hemoglobin receptor › Haptoglobin-hemoglobin receptor | 0.69 | 52.0 | 3.85e-01 | 78.2% | 33.7% |
| 3923557 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.69 | 51.0 | 3.87e-01 | 78.2% | 66.0% |
| 4950970 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.69 | 52.0 | 3.38e-01 | 80.5% | 43.9% |
| 3939311 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.68 | 51.0 | 4.71e-01 | 78.2% | 89.1% |
| 3656598 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.68 | 50.0 | 4.35e-01 | 77.0% | 73.1% |
| 2832541 | 5001.1.1.6 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Bac_rhodopsin | 0.68 | 61.0 | 4.48e-01 | 98.9% | 40.7% |
| 3472984 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.67 | 57.0 | 4.46e-01 | 90.8% | 59.4% |
| 5018039 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.67 | 58.0 | 5.29e-01 | 94.3% | 81.7% |
| 3194501 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.67 | 49.0 | 3.93e-01 | 79.3% | 40.0% |
| 3783976 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.67 | 49.0 | 4.90e-01 | 78.2% | 96.7% |
| 4336245 | 2004.1.1.567 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_23 | 0.67 | 49.0 | 2.92e-01 | 78.2% | 26.4% |
| 3254236 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.66 | 48.0 | 4.51e-01 | 75.9% | 97.1% |
| 3651030 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.66 | 57.0 | 4.54e-01 | 95.4% | 49.1% |
| 4360632 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.65 | 47.0 | 3.96e-01 | 77.0% | 78.0% |
| 3376449 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.64 | 56.0 | 3.88e-01 | 96.6% | 55.5% |
| 3600005 | 3324.1.1.0 ↗ | extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases | 0.64 | 47.0 | 4.15e-01 | 78.2% | 57.7% |
| 3408380 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.64 | 47.0 | 4.54e-01 | 78.2% | 74.0% |
| 4981980 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.64 | 48.0 | 4.40e-01 | 80.5% | 89.6% |
| 4083451 | 192.2.1.20 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ASNSD1-SEP | 0.63 | 46.0 | 4.81e-01 | 77.0% | 90.0% |
| 3517103 | 4992.1.1.12 ↗ | extended segments › RelB-like › RelB-like › RelB-like › LIN9_C | 0.63 | 45.0 | 4.88e-01 | 74.7% | 94.3% |
| 3614055 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.63 | 53.0 | 3.98e-01 | 92.0% | 85.2% |
| 5081050 | 4275.1.1.11 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › SU10_adaptor | 0.63 | 57.0 | 4.33e-01 | 100.0% | 86.0% |
| 3276536 | 5050.1.1.59 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › OATP, MFS_1 | 0.62 | 51.0 | 3.13e-01 | 87.4% | 25.4% |
| 3922287 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.61 | 55.0 | 4.51e-01 | 100.0% | 66.3% |
| 138184 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.61 | 52.0 | 3.75e-01 | 96.6% | 32.2% |
| 3892397 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.59 | 51.0 | 3.58e-01 | 97.7% | 72.2% |
| 4946068 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.59 | 46.0 | 3.47e-01 | 86.2% | 57.0% |
| 3735230 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.57 | 50.0 | 4.11e-01 | 97.7% | 54.2% |
| 3632858 | 109.4.1.1329 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NatB_MDM20, PF31234 | 0.53 | 48.0 | 2.74e-01 | 100.0% | 10.9% |
| 3949818 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.53 | 42.0 | 3.44e-01 | 83.9% | 52.9% |
| 3734461 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 45.0 | 3.59e-01 | 100.0% | 91.8% |
| 3787065 | 109.4.1.381 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Rrn11 | 0.52 | 46.0 | 3.42e-01 | 100.0% | 40.4% |
| 3974474 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.51 | 36.0 | 3.62e-01 | 73.6% | 72.2% |