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KC821626.1__AGO49126.1__Phi39-1_gp11__00011
Bact-VirKC821626.1__AGO49126.1__Phi39-1_gp11__00011
Identity
- Accession:
- KC821626 ↗
- Kingdom:
- phage
Quality
79.3
mean pLDDT
Cluster
View cluster (37 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-171
Domain cluster:
rep: IMGVR_UViG_3300020814_000341-3300020814-Ga0214088_182449110__D102-238
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04586.23 best | Peptidase_S78 | 33.5 | 6.30e-08 | 93.4% | 62.4% |
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sjrA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.63 | 29.0 | 3.54e-01 | 82.0% | 65.7% |
| 2b4vA03 | 3.30.70.1970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 30.0 | 3.74e-01 | 82.6% | 75.8% |
| 2fm8B00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.58 | 34.0 | 3.92e-01 | 78.4% | 76.8% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.58 | 26.0 | 3.53e-01 | 80.2% | 80.0% |
| 1zpvA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 27.0 | 3.61e-01 | 80.2% | 82.4% |
| 1s7hA01 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 25.0 | 3.42e-01 | 81.4% | 82.5% |
| 1ry9A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.56 | 33.0 | 3.69e-01 | 81.4% | 72.2% |
| 1vioA03 | 3.30.70.1560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif | 0.56 | 26.0 | 3.55e-01 | 79.0% | 86.6% |
| 1sc6A03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.56 | 25.0 | 3.43e-01 | 81.4% | 82.9% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 29.0 | 3.65e-01 | 80.8% | 84.7% |
| 7xinA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 30.0 | 3.55e-01 | 92.8% | 77.1% |
| 1yz7A02 | 3.30.70.1130 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha | 0.55 | 28.0 | 3.66e-01 | 81.4% | 87.8% |
| 4wxaA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.55 | 29.0 | 3.89e-01 | 90.4% | 98.8% |
| 2jtdA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 28.0 | 3.20e-01 | 88.6% | 63.9% |
| 6ef7A00 | 2.60.40.4140 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 37.0 | 4.21e-01 | 89.2% | 91.9% |
| 2nyiA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 25.0 | 3.34e-01 | 80.2% | 82.7% |
| 2r4fA03 | 3.30.70.420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain | 0.54 | 32.0 | 3.75e-01 | 76.6% | 82.9% |
| 4ctaA02 | 3.30.70.2860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 24.0 | 3.38e-01 | 80.2% | 88.0% |
| 5o5cB02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 30.0 | 3.33e-01 | 94.6% | 67.2% |
| 2bk8A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 30.0 | 3.71e-01 | 86.8% | 90.7% |
| 3dfeA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 24.0 | 3.22e-01 | 82.0% | 79.3% |
| 2ahoB03 | 3.30.70.1130 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha | 0.53 | 29.0 | 3.81e-01 | 78.4% | 98.9% |
| 1k8kD01 | 3.30.1460.20 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 39.0 | 4.05e-01 | 96.4% | 82.8% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 25.0 | 3.31e-01 | 80.8% | 84.5% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.52 | 25.0 | 3.47e-01 | 82.6% | 97.3% |
| 1t0tV02 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.51 | 28.0 | 3.30e-01 | 81.4% | 77.5% |
| 1tuwA00 | 3.30.70.1090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. | 0.51 | 29.0 | 3.53e-01 | 79.0% | 86.8% |
| 5joeA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 27.0 | 3.46e-01 | 85.6% | 90.2% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5083161 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.84 | 70.0 | 7.56e-01 | 86.2% | 100.0% |
| 5039158 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.80 | 65.0 | 6.66e-01 | 83.2% | 98.8% |
| 4959923 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 26.0 | 3.95e-01 | 80.2% | 88.6% |
| 4937853 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.62 | 27.0 | 4.17e-01 | 70.1% | 100.0% |
| 3701059 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.62 | 29.0 | 3.67e-01 | 82.0% | 74.7% |
| 4438356 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.61 | 27.0 | 3.91e-01 | 80.8% | 90.7% |
| 3475962 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 27.0 | 3.43e-01 | 82.0% | 68.4% |
| 4134039 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.61 | 26.0 | 3.76e-01 | 80.8% | 86.7% |
| 4311488 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.60 | 28.0 | 3.89e-01 | 81.4% | 90.0% |
| 4948386 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.59 | 30.0 | 4.19e-01 | 89.8% | 100.0% |
| 4165624 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.59 | 28.0 | 3.74e-01 | 81.4% | 84.7% |
| 3165390 | 304.24.1.36 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SPOR | 0.59 | 25.0 | 3.51e-01 | 80.2% | 80.0% |
| 5000786 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.59 | 29.0 | 4.09e-01 | 87.4% | 98.8% |
| 5015450 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.59 | 26.0 | 3.57e-01 | 82.0% | 82.5% |
| 4344773 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.58 | 26.0 | 3.85e-01 | 81.4% | 97.1% |
| 3488179 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.58 | 32.0 | 4.24e-01 | 71.9% | 98.9% |
| 3445191 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.58 | 28.0 | 3.95e-01 | 85.6% | 100.0% |
| 5032609 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.58 | 28.0 | 3.96e-01 | 87.4% | 100.0% |
| 4940284 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.57 | 28.0 | 3.92e-01 | 88.0% | 100.0% |
| 4991988 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.57 | 26.0 | 3.84e-01 | 84.4% | 100.0% |
| 5072239 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.57 | 30.0 | 4.00e-01 | 91.6% | 95.6% |
| 5027876 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.56 | 28.0 | 3.94e-01 | 71.3% | 100.0% |
| 5004123 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.56 | 28.0 | 3.86e-01 | 91.0% | 100.0% |
| 5030527 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.56 | 28.0 | 3.91e-01 | 89.2% | 100.0% |
| 3552384 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.55 | 29.0 | 3.89e-01 | 72.5% | 95.5% |
| 4930385 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.55 | 26.0 | 3.60e-01 | 77.2% | 93.3% |
| 1137985 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.55 | 29.0 | 3.78e-01 | 80.2% | 90.3% |
| 3580185 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.55 | 31.0 | 3.94e-01 | 91.6% | 97.8% |
| 5035849 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.55 | 28.0 | 3.80e-01 | 90.4% | 98.7% |
| 1513105 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.55 | 28.0 | 3.87e-01 | 90.4% | 98.8% |
| 3974776 | 304.8.1.9 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 | 0.55 | 25.0 | 3.50e-01 | 80.2% | 92.0% |
| 4778785 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 25.0 | 3.39e-01 | 80.2% | 83.1% |
| 4927268 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.55 | 28.0 | 3.83e-01 | 71.9% | 100.0% |
| 3592723 | 304.151.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase | 0.54 | 29.0 | 3.66e-01 | 85.0% | 88.4% |
| 1031079 | 11.1.1.292 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GspA_SrpA_N | 0.54 | 37.0 | 4.14e-01 | 89.2% | 90.5% |
| 3313948 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.54 | 27.0 | 3.79e-01 | 89.8% | 100.0% |
| 2834102 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.54 | 29.0 | 3.79e-01 | 87.4% | 97.7% |
| 3271101 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.54 | 28.0 | 3.74e-01 | 90.4% | 100.0% |
| 4971598 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.54 | 26.0 | 3.63e-01 | 83.2% | 98.7% |
| 4262988 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.53 | 28.0 | 3.74e-01 | 72.5% | 97.6% |
| 4182456 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.53 | 28.0 | 3.80e-01 | 89.2% | 100.0% |
| 4940484 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.53 | 26.0 | 3.61e-01 | 79.6% | 96.2% |
| 4215371 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.52 | 29.0 | 3.70e-01 | 82.6% | 97.8% |
| 3838269 | 304.28.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › ACR_tran | 0.52 | 29.0 | 3.67e-01 | 78.4% | 93.7% |
| 4026350 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.51 | 29.0 | 3.63e-01 | 82.6% | 98.9% |
| 5080869 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.51 | 27.0 | 3.63e-01 | 88.6% | 100.0% |
| 4068249 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.50 | 25.0 | 3.42e-01 | 80.8% | 96.2% |
| 4984786 | 4956.1.1.0 ↗ | a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.50 | 25.0 | 3.45e-01 | 79.6% | 94.1% |
| 4973167 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.50 | 26.0 | 3.60e-01 | 70.7% | 100.0% |