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KC821626.1__AGO49148.1__Phi39-1_gp33__00033

Bact-Vir

KC821626.1__AGO49148.1__Phi39-1_gp33__00033

Identity

Accession:
KC821626 ↗
Kingdom:
phage

Quality

95.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Cellulophaga_phage_phi39:1

TaxID: 1327993

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 32-83
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 61.0 5.71e-01 100.0% 80.0%
3f2bA07 6.10.140.1510 Special › Helix non-globular › Helix Hairpins › 0.67 54.0 4.66e-01 92.3% 57.0%
2elcA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.65 44.0 4.09e-01 71.2% 94.0%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.53 43.0 3.84e-01 98.1% 86.4%
1orjD00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.53 46.0 3.53e-01 100.0% 76.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3905319 325.1.7.42 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Opiods_neuropep 0.71 58.0 5.78e-01 98.1% 90.9%
3297494 143.1.1.0 ↗ alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain 0.60 46.0 4.47e-01 96.2% 75.0%
4875131 109.4.1.158 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ERAP1_C 0.59 39.0 3.53e-01 71.2% 87.8%
3930423 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.56 37.0 3.63e-01 71.2% 60.0%
3510272 101.1.1.213 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HRI2_3H 0.54 37.0 3.38e-01 71.2% 95.7%