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KC821627.1__AGO49181.1__Phi18-2_gp18__00018
Bact-VirKC821627.1__AGO49181.1__Phi18-2_gp18__00018
Identity
- Accession:
- KC821627 ↗
- Kingdom:
- phage
Quality
89.5
mean pLDDT
Taxonomy
TaxID: 1327995
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-75
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5nldB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 38.0 | 3.01e-01 | 100.0% | 25.4% |
| 3zsjA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 39.0 | 3.10e-01 | 100.0% | 27.5% |
| 2awnC02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.66 | 52.0 | 5.01e-01 | 91.4% | 76.9% |
| 4bgjA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.65 | 49.0 | 4.16e-01 | 81.4% | 91.5% |
| 3u4vA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 52.0 | 4.47e-01 | 91.4% | 72.4% |
| 1krhA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 47.0 | 4.20e-01 | 77.1% | 96.9% |
| 3q39B02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.64 | 47.0 | 4.10e-01 | 80.0% | 98.2% |
| 7k98B01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 52.0 | 4.55e-01 | 95.7% | 87.7% |
| 1ue6D00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 50.0 | 4.44e-01 | 91.4% | 88.5% |
| 1eujA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 49.0 | 3.85e-01 | 91.4% | 89.0% |
| 4b3fX02 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 45.0 | 4.06e-01 | 78.6% | 94.9% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.60 | 42.0 | 4.05e-01 | 75.7% | 100.0% |
| 3m4rA01 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.59 | 50.0 | 3.68e-01 | 97.1% | 82.1% |
| 1iyxA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.59 | 46.0 | 3.87e-01 | 85.7% | 76.8% |
| 4b43A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 46.0 | 3.97e-01 | 87.1% | 80.0% |
| 4pofA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 47.0 | 4.22e-01 | 92.9% | 84.6% |
| 1qfjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 42.0 | 3.91e-01 | 77.1% | 94.5% |
| 3a7rA02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.58 | 30.0 | 2.79e-01 | 94.3% | 37.1% |
| 1g7sA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 46.0 | 4.10e-01 | 91.4% | 95.4% |
| 6ipaA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 47.0 | 3.72e-01 | 95.7% | 54.5% |
| 2bm0A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 48.0 | 4.30e-01 | 95.7% | 91.3% |
| 6a97C01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.56 | 44.0 | 3.63e-01 | 87.1% | 93.9% |
| 3r07C00 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.56 | 29.0 | 2.74e-01 | 94.3% | 37.5% |
| 1f9cA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.56 | 43.0 | 3.66e-01 | 85.7% | 68.9% |
| 1uapA00 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 46.0 | 3.90e-01 | 98.6% | 67.2% |
| 2dy1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 48.0 | 4.34e-01 | 98.6% | 96.9% |
| 6htnA01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.55 | 39.0 | 3.20e-01 | 75.7% | 100.0% |
| 3u2gA02 | 2.60.98.40 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain | 0.54 | 38.0 | 3.18e-01 | 74.3% | 79.1% |
| 2yweA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 44.0 | 3.97e-01 | 90.0% | 94.0% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.54 | 38.0 | 3.72e-01 | 75.7% | 100.0% |
| 3a1jB00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.54 | 44.0 | 3.02e-01 | 92.9% | 37.9% |
| 4zciA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 44.0 | 3.99e-01 | 94.3% | 95.0% |
| 4kcaA02 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 41.0 | 2.66e-01 | 88.6% | 89.8% |
| 5nslA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 41.0 | 2.58e-01 | 87.1% | 55.1% |
| 2qdeA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 43.0 | 3.55e-01 | 94.3% | 99.3% |
| 1gd5A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 38.0 | 3.20e-01 | 80.0% | 83.1% |
| 2qh9A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.52 | 44.0 | 3.39e-01 | 98.6% | 84.8% |
| 1r0mA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 43.0 | 3.58e-01 | 95.7% | 97.7% |
| 4dy0B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.51 | 42.0 | 3.49e-01 | 92.9% | 70.3% |
| 1vw4502 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 36.0 | 3.29e-01 | 74.3% | 60.9% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 29.0 | 2.66e-01 | 97.1% | 39.8% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3947044 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.80 | 74.0 | 7.25e-01 | 100.0% | 98.7% |
| 3921380 | 10.1.1.4 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin | 0.71 | 38.0 | 3.03e-01 | 100.0% | 25.7% |
| 3851887 | 10.1.1.4 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin | 0.70 | 38.0 | 2.89e-01 | 100.0% | 22.5% |
| 3970847 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 57.0 | 5.76e-01 | 91.4% | 90.0% |
| 4505258 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 51.0 | 4.31e-01 | 88.6% | 48.7% |
| 4029209 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.67 | 51.0 | 5.14e-01 | 87.1% | 80.0% |
| 3612666 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 55.0 | 4.64e-01 | 97.1% | 77.7% |
| 3582421 | 2.1.1.249 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_DEPS-1_2nd | 0.66 | 59.0 | 4.47e-01 | 100.0% | 78.2% |
| 3244265 | 2.1.1.317 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF272, PF26704 | 0.66 | 59.0 | 4.58e-01 | 100.0% | 86.0% |
| 3629514 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 57.0 | 5.49e-01 | 100.0% | 96.2% |
| 4375712 | 2.1.1.16 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind | 0.64 | 53.0 | 4.63e-01 | 95.7% | 87.0% |
| 4457686 | 2.1.1.16 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind | 0.64 | 52.0 | 4.54e-01 | 94.3% | 85.2% |
| 3251601 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 51.0 | 5.02e-01 | 88.6% | 85.3% |
| 3190862 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 46.0 | 3.89e-01 | 78.6% | 98.3% |
| 5010618 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 43.0 | 4.51e-01 | 72.9% | 85.7% |
| 4610349 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.62 | 50.0 | 4.86e-01 | 91.4% | 96.2% |
| 3711866 | 2.1.1.106 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PRS7_OB | 0.62 | 54.0 | 4.76e-01 | 97.1% | 64.8% |
| 5026916 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.62 | 51.0 | 4.48e-01 | 92.9% | 96.4% |
| 3589918 | 2.1.1.16 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind | 0.62 | 50.0 | 4.34e-01 | 94.3% | 85.0% |
| 3268408 | 2.1.1.106 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PRS7_OB | 0.61 | 52.0 | 4.21e-01 | 97.1% | 48.9% |
| 3517758 | 2.1.1.106 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PRS7_OB | 0.61 | 49.0 | 4.76e-01 | 94.3% | 81.2% |
| 3193911 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.60 | 47.0 | 4.45e-01 | 85.7% | 77.6% |
| 4255495 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.60 | 46.0 | 3.06e-01 | 84.3% | 22.4% |
| 5082744 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 49.0 | 4.56e-01 | 92.9% | 84.4% |
| 3707461 | 218.1.1.2 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N | 0.59 | 46.0 | 3.77e-01 | 85.7% | 68.9% |
| 4399358 | 218.1.1.2 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N | 0.59 | 46.0 | 3.74e-01 | 85.7% | 70.4% |
| 4233747 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.58 | 41.0 | 3.78e-01 | 75.7% | 92.6% |
| 4132631 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.58 | 42.0 | 3.89e-01 | 77.1% | 94.4% |
| 4012780 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 51.0 | 4.14e-01 | 100.0% | 77.8% |
| 4984315 | 218.1.1.2 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N | 0.58 | 45.0 | 3.61e-01 | 85.7% | 65.5% |
| 3595055 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.58 | 46.0 | 3.66e-01 | 87.1% | 70.3% |
| 4114062 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 41.0 | 3.70e-01 | 75.7% | 88.0% |
| 4960640 | 304.165.1.4 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › HVO_2525_N | 0.57 | 48.0 | 3.79e-01 | 92.9% | 84.1% |
| 4080874 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.57 | 37.0 | 4.07e-01 | 92.9% | 92.0% |
| 3933370 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.57 | 50.0 | 4.03e-01 | 100.0% | 91.4% |
| 5057041 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.57 | 29.0 | 2.71e-01 | 92.9% | 37.5% |
| 4066189 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.56 | 39.0 | 3.73e-01 | 74.3% | 64.7% |
| 5080369 | 244.3.1.4 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C | 0.56 | 30.0 | 2.75e-01 | 94.3% | 35.8% |
| 4205494 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.55 | 45.0 | 3.92e-01 | 95.7% | 85.0% |
| 4939488 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.55 | 48.0 | 3.17e-01 | 98.6% | 44.8% |
| 3281134 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.55 | 46.0 | 3.86e-01 | 95.7% | 83.2% |
| 3312151 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 45.0 | 3.52e-01 | 91.4% | 47.7% |
| 4140206 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.55 | 38.0 | 3.63e-01 | 74.3% | 67.1% |
| 4943568 | 1.1.7.147 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP-eEF1A_C | 0.54 | 42.0 | 3.87e-01 | 88.6% | 93.7% |
| 3390831 | 330.1.1.10 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_MRPL44 | 0.53 | 38.0 | 3.63e-01 | 74.3% | 66.3% |
| 5008207 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 37.0 | 3.61e-01 | 74.3% | 76.2% |
| 4308556 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.52 | 46.0 | 4.13e-01 | 100.0% | 92.0% |
| 4602602 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.52 | 42.0 | 3.59e-01 | 91.4% | 78.3% |
| 4516083 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.52 | 43.0 | 3.81e-01 | 95.7% | 89.1% |
| 3550395 | 330.1.1.10 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_MRPL44 | 0.52 | 37.0 | 3.41e-01 | 74.3% | 62.2% |
| 4425983 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 46.0 | 4.09e-01 | 100.0% | 91.0% |
| 5058339 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.52 | 41.0 | 3.81e-01 | 91.4% | 92.6% |
| 4369846 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.51 | 44.0 | 3.73e-01 | 98.6% | 86.7% |
| 3490893 | 330.1.1.10 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_MRPL44 | 0.51 | 37.0 | 3.01e-01 | 75.7% | 46.9% |
| 1421337 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 40.0 | 3.73e-01 | 91.4% | 91.7% |
| 3740684 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.51 | 36.0 | 3.47e-01 | 74.3% | 66.3% |
| 1420619 | 330.1.1.10 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_MRPL44 | 0.51 | 36.0 | 3.29e-01 | 74.3% | 60.9% |
| 3973947 | 3454.1.1.0 ↗ | beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like | 0.51 | 44.0 | 4.43e-01 | 100.0% | 100.0% |
| 4352697 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.50 | 42.0 | 3.85e-01 | 97.1% | 94.7% |
| 4502261 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.50 | 42.0 | 3.59e-01 | 98.6% | 81.6% |
D2
high
residues 84-137
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3edvA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.83 | 75.0 | 5.10e-01 | 100.0% | 33.9% |
| 2ficB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.83 | 74.0 | 4.90e-01 | 98.1% | 87.6% |
| 1m5iA00 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.83 | 75.0 | 5.96e-01 | 100.0% | 53.3% |
| 3r6nA02 | 1.20.58.1060 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 73.0 | 5.11e-01 | 100.0% | 38.7% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 67.0 | 5.13e-01 | 94.4% | 43.0% |
| 2pmsC00 | 6.10.140.920 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 72.0 | 5.59e-01 | 100.0% | 49.5% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 64.0 | 5.82e-01 | 94.4% | 72.2% |
| 2vsoF01 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.72 | 53.0 | 3.39e-01 | 83.3% | 18.2% |
| 2lfrA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.71 | 60.0 | 4.86e-01 | 100.0% | 49.5% |
| 4djgB00 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.71 | 48.0 | 5.07e-01 | 77.8% | 80.9% |
| 3l1nA02 | 1.20.1280.140 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.68 | 51.0 | 4.48e-01 | 87.0% | 52.9% |
| 2gsqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 50.0 | 4.07e-01 | 87.0% | 43.5% |
| 2o4cA03 | 3.30.1370.170 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Erythronate-4-phosphate dehydrogenase, dimerisation domain | 0.63 | 49.0 | 4.29e-01 | 90.7% | 58.0% |
| 2kz6A01 | 6.10.140.1310 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 47.0 | 4.28e-01 | 94.4% | 64.2% |
| 4cs9C00 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.55 | 43.0 | 3.16e-01 | 90.7% | 91.5% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3887313 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.97 | 67.0 | 5.03e-01 | 74.1% | 33.9% |
| 3512088 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.87 | 73.0 | 6.81e-01 | 88.9% | 76.9% |
| 3748441 | 604.5.1.32 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › TMEM120A-B | 0.76 | 68.0 | 5.58e-01 | 100.0% | 60.0% |
| 3941250 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.75 | 62.0 | 4.91e-01 | 100.0% | 45.5% |
| 3742440 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.72 | 66.0 | 5.87e-01 | 100.0% | 94.7% |
| 3935032 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.69 | 57.0 | 4.69e-01 | 100.0% | 49.5% |
| 3940791 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.63 | 52.0 | 4.34e-01 | 98.1% | 52.0% |