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KC847113.1__AGK88020.1__PBP180_005__00005
Bact-VirKC847113.1__AGK88020.1__PBP180_005__00005
Identity
- Accession:
- KC847113 ↗
- Kingdom:
- phage
Quality
85.0
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-62
Domain cluster:
rep: KX965989.1__APC46474.1__X__00025__D4-60
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17356.8 best | PBSX_XtrA | 68.4 | 5.30e-19 | 100.0% | 87.5% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4f78A01 | 3.30.200.180 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.66 | 44.0 | 3.72e-01 | 70.7% | 99.0% |
| 5iroD00 | 2.60.40.3530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 40.0 | 3.38e-01 | 70.7% | 56.9% |
| 4qdgA02 | 2.60.40.2090 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 41.0 | 3.29e-01 | 79.3% | 80.0% |
| 2cr4A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 43.0 | 3.72e-01 | 87.9% | 87.9% |
| 3hrgA01 | 3.30.420.250 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, N-terminal domain | 0.56 | 45.0 | 3.52e-01 | 96.6% | 45.5% |
| 2l03A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.56 | 43.0 | 4.09e-01 | 91.4% | 78.4% |
| 4dmzA02 | 3.30.70.2880 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 45.0 | 3.52e-01 | 98.3% | 80.3% |
| 1cqxA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 39.0 | 3.20e-01 | 77.6% | 85.6% |
| 2kmwA01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 34.0 | 2.92e-01 | 100.0% | 34.6% |
| 6ofsA04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.54 | 46.0 | 3.32e-01 | 100.0% | 89.1% |
| 6fezA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 37.0 | 3.28e-01 | 75.9% | 86.2% |
| 2fd6U02 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.53 | 41.0 | 3.72e-01 | 91.4% | 72.1% |
| 1wxrA03 | 3.30.160.280 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 38.0 | 3.55e-01 | 79.3% | 69.7% |
| 8enbA01 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.52 | 35.0 | 3.17e-01 | 70.7% | 84.3% |
| 3goxA03 | 3.40.1800.10 | Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases | 0.51 | 38.0 | 3.50e-01 | 86.2% | 85.2% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3571522 | 3246.1.1.1 ↗ | few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › ADAM_CR | 0.68 | 43.0 | 3.34e-01 | 70.7% | 28.5% |
| 4138663 | 4099.1.1.3 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spc24 | 0.65 | 44.0 | 4.27e-01 | 70.7% | 72.3% |
| 5032935 | 304.8.1.112 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › MazE_antitoxin | 0.59 | 45.0 | 3.53e-01 | 86.2% | 72.6% |
| 3265710 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 34.0 | 3.25e-01 | 100.0% | 45.7% |
| 4942106 | 5.1.4.43 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 | 0.56 | 46.0 | 2.99e-01 | 96.6% | 42.6% |
| 4358798 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.52 | 44.0 | 4.10e-01 | 98.3% | 86.7% |
| 3352487 | 1.1.1.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_N | 0.51 | 36.0 | 2.55e-01 | 77.6% | 64.7% |
| 3618512 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.50 | 40.0 | 2.63e-01 | 89.7% | 37.5% |