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KC847113.1__AGK88035.1__PBP180_0020__00020
Bact-VirKC847113.1__AGK88035.1__PBP180_0020__00020
Identity
- Accession:
- KC847113 ↗
- Kingdom:
- phage
Quality
89.6
mean pLDDT
Cluster
View cluster (26 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 36-162
Domain cluster:
rep: IMGVR_UViG_3300005298_000040-3300005298-Ga0071330_107091546__D3-94
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08890.18 best | Phage_TAC_5 | 120.9 | 4.90e-35 | 100.0% | 91.7% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kluA01 | 3.30.2220.30 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › | 1.00 | 81.0 | 8.76e-01 | 91.3% | 95.5% |
| 2ob9A00 | 3.30.2220.20 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › Phage tail assembly chaperone gp13-like | 0.67 | 48.0 | 5.21e-01 | 92.1% | 87.9% |
| 5znqA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 29.0 | 2.59e-01 | 90.6% | 30.6% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 26.0 | 3.19e-01 | 91.3% | 72.4% |
| 2kx2A00 | 3.30.780.30 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › | 0.51 | 26.0 | 2.96e-01 | 75.6% | 61.5% |
| 4z3xA03 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.51 | 36.0 | 3.20e-01 | 72.4% | 88.2% |
| 2cxaA01 | 3.30.70.3550 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Leucyl/phenylalanyl-tRNA-protein transferase, N-terminal domain | 0.50 | 18.0 | 2.42e-01 | 93.7% | 53.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 119441 | 3103.1.1.1 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_5 | 1.00 | 81.0 | 8.41e-01 | 91.3% | 88.2% |
| 5039151 | 3103.1.1.0 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN | 0.72 | 54.0 | 6.04e-01 | 85.0% | 100.0% |
| 4955284 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.58 | 22.0 | 3.51e-01 | 70.1% | 95.6% |
| 3982048 | 327.16.1.5 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › type_II_gspD_N0 | 0.57 | 25.0 | 3.46e-01 | 76.4% | 94.0% |
| 3223228 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 38.0 | 2.81e-01 | 92.1% | 25.9% |
| 185139 | 2498.1.1.23 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M49 | 0.52 | 41.0 | 2.61e-01 | 85.0% | 31.8% |
| 3626178 | 592.7.1.1 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 | 0.51 | 31.0 | 3.53e-01 | 92.1% | 82.2% |