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KC853746.1__AGW43608.1__JG068_026__00026
Bact-VirKC853746.1__AGW43608.1__JG068_026__00026
Identity
- Accession:
- KC853746 ↗
- Kingdom:
- phage
Quality
86.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autonotataviridae›
Mguuvirus›
Burkholderia_phage_JG068
TaxID: 1401297
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-47
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vxgA01 | 6.10.140.270 | Special › Helix non-globular › Helix Hairpins › | 0.87 | 67.0 | 6.78e-01 | 97.9% | 84.8% |
| 6fbtA01 | 1.10.1240.20 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain | 0.84 | 73.0 | 6.24e-01 | 100.0% | 64.5% |
| 2ifuD00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.82 | 72.0 | 4.42e-01 | 100.0% | 17.0% |
| 1gaxA02 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.82 | 73.0 | 4.58e-01 | 97.9% | 40.5% |
| 4ar9A02 | 1.10.390.20 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › | 0.80 | 56.0 | 3.92e-01 | 74.5% | 26.1% |
| 3ne5B04 | 6.10.140.730 | Special › Helix non-globular › Helix Hairpins › | 0.78 | 65.0 | 6.38e-01 | 100.0% | 88.2% |
| 3ziuA01 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.77 | 70.0 | 4.37e-01 | 100.0% | 22.1% |
| 4malA00 | 1.20.58.2200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 67.0 | 6.21e-01 | 100.0% | 78.0% |
| 1e2aA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.76 | 67.0 | 5.18e-01 | 100.0% | 76.5% |
| 4rg9B01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.76 | 64.0 | 4.33e-01 | 95.7% | 41.9% |
| 4wnfA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.75 | 62.0 | 3.91e-01 | 95.7% | 33.7% |
| 3ph0C00 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.75 | 59.0 | 5.75e-01 | 100.0% | 81.1% |
| 3gw4A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.74 | 63.0 | 4.22e-01 | 100.0% | 27.6% |
| 1iwpG02 | 1.10.1510.20 | Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Propanediol/glycerol dehydratase, small subunit | 0.70 | 55.0 | 4.36e-01 | 85.1% | 74.2% |
| 2ra1A02 | 1.20.58.780 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 59.0 | 5.20e-01 | 95.7% | 94.1% |
| 1wgfA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.60 | 39.0 | 3.79e-01 | 70.2% | 58.5% |
| 2f3nA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.56 | 47.0 | 4.31e-01 | 97.9% | 72.3% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3435822 | 109.4.1.1257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 | 0.91 | 78.0 | 5.12e-01 | 93.6% | 26.9% |
| 3169121 | 109.4.1.1152 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_Nup120 | 0.86 | 72.0 | 4.68e-01 | 100.0% | 22.6% |
| 4068028 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.85 | 60.0 | 3.60e-01 | 74.5% | 12.8% |
| 4648749 | 101.1.2.274 ↗ | alpha arrays › HTH › HTH › winged helix domain › SgrR_N | 0.85 | 68.0 | 5.03e-01 | 100.0% | 35.0% |
| 3190533 | 109.4.1.3564 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_CNRKL1_C, HAT_PRP39_N, HAT_PRP39_C | 0.83 | 71.0 | 4.06e-01 | 100.0% | 9.7% |
| 4580956 | 2484.1.1.222 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UPF0236 | 0.83 | 73.0 | 4.60e-01 | 100.0% | 20.0% |
| 4468764 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.81 | 71.0 | 5.36e-01 | 100.0% | 40.9% |
| 3364825 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.79 | 70.0 | 4.57e-01 | 100.0% | 23.4% |
| 3537621 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.77 | 68.0 | 3.96e-01 | 100.0% | 11.6% |
| 1346823 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.77 | 66.0 | 5.98e-01 | 100.0% | 71.9% |
| 3321594 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.76 | 62.0 | 4.32e-01 | 100.0% | 28.7% |
| 3698189 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.74 | 64.0 | 4.54e-01 | 100.0% | 32.4% |
| 3310828 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.73 | 59.0 | 6.01e-01 | 95.7% | 100.0% |
| 4029523 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 60.0 | 5.75e-01 | 97.9% | 80.0% |
| 4803255 | 109.4.1.449 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2,TPR_8 | 0.70 | 57.0 | 4.80e-01 | 95.7% | 82.4% |