←Back to structures
KC959568.1__AGN89393.1__X__00010
Bact-VirKC959568.1__AGN89393.1__X__00010
Identity
- Accession:
- KC959568 ↗
- Kingdom:
- phage
Quality
90.5
mean pLDDT
Taxonomy
TaxID: 1325731
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-95
Domain cluster:
rep: MZ447863.1__QXN68085.1__X__00049__D2-86
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.63 | 45.0 | 4.77e-01 | 91.5% | 84.5% |
| 3kd3A02 | 1.10.150.210 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2 | 0.62 | 36.0 | 4.39e-01 | 75.5% | 90.0% |
| 3qnmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.59 | 44.0 | 4.55e-01 | 91.5% | 83.3% |
| 3b4qA00 | 1.10.1200.100 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › conserved protein domain from corynebacterium diphtheriae | 0.58 | 40.0 | 4.13e-01 | 72.3% | 77.0% |
| 2vqgA00 | 1.10.10.1280 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Alpha-helical porin B/porin C | 0.55 | 38.0 | 4.11e-01 | 83.0% | 88.2% |
| 2cwyA00 | 1.10.3450.10 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › TTHA0068-like | 0.54 | 31.0 | 3.21e-01 | 85.1% | 57.0% |
| 1of9A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.53 | 34.0 | 3.68e-01 | 80.9% | 77.9% |
| 1c9bA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 34.0 | 3.35e-01 | 83.0% | 59.4% |
| 3o39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.52 | 36.0 | 3.65e-01 | 72.3% | 94.8% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 37.0 | 3.90e-01 | 92.6% | 87.7% |
| 3d1bB00 | 1.20.920.40 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.50 | 37.0 | 3.52e-01 | 76.6% | 92.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3438800 | 108.1.1.23 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › RST | 0.72 | 42.0 | 4.88e-01 | 77.7% | 78.6% |
| 3671293 | 509.1.1.12 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PF25972 | 0.71 | 43.0 | 4.93e-01 | 80.9% | 81.4% |
| 3809254 | 509.1.1.1 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH | 0.67 | 44.0 | 5.20e-01 | 81.9% | 96.9% |
| 3167402 | 108.1.1.116 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › SAGA-Tad1 | 0.62 | 43.0 | 4.45e-01 | 84.0% | 75.6% |
| 4997169 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.57 | 44.0 | 3.28e-01 | 80.9% | 80.0% |
| 3608731 | 3949.1.1.0 ↗ | alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain | 0.56 | 33.0 | 3.73e-01 | 79.8% | 77.1% |
| 4014217 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.56 | 41.0 | 4.25e-01 | 85.1% | 83.1% |
| 3896576 | 189.1.1.2 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP | 0.55 | 45.0 | 3.53e-01 | 90.4% | 48.4% |
| 5032081 | 2006.1.1.14 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD | 0.55 | 43.0 | 3.22e-01 | 81.9% | 78.2% |
| 3560235 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.54 | 39.0 | 2.52e-01 | 77.7% | 63.0% |
| 3723953 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 43.0 | 3.20e-01 | 87.2% | 46.4% |
| 5025027 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.53 | 34.0 | 3.10e-01 | 83.0% | 47.2% |
| 3514483 | 532.2.1.10 ↗ | alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains › NTP_transf_7 | 0.52 | 40.0 | 3.77e-01 | 95.7% | 67.0% |
D2
high
residues 106-190
Domain cluster:
rep: MT732473.1__QQV91383.1__Leef1_2__00002__D89-156
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.60 | 42.0 | 3.49e-01 | 74.1% | 47.7% |
| 1vwxQ00 | 3.100.10.10 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › | 0.53 | 42.0 | 3.27e-01 | 84.7% | 67.9% |
| 4nxtA01 | 1.10.1410.40 | Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › | 0.53 | 47.0 | 3.96e-01 | 100.0% | 65.5% |
| 7wu8B01 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.53 | 40.0 | 4.19e-01 | 85.9% | 87.3% |
| 1wlzA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.50 | 32.0 | 3.35e-01 | 97.6% | 70.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3242356 | 605.4.1.19 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › PF30187 | 0.65 | 44.0 | 4.37e-01 | 70.6% | 81.1% |
| 4986368 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.60 | 44.0 | 4.35e-01 | 76.5% | 86.5% |
| 4957771 | 5069.1.3.137 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › DUF7521 | 0.59 | 44.0 | 4.32e-01 | 77.6% | 91.1% |
| 4957637 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.59 | 43.0 | 4.22e-01 | 75.3% | 75.6% |
| 3816074 | 109.4.1.94 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANTH | 0.56 | 42.0 | 3.26e-01 | 77.6% | 56.6% |
| 3521510 | 192.7.1.73 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › PF31020 | 0.53 | 39.0 | 3.65e-01 | 78.8% | 63.6% |
| 3889216 | 509.1.1.3 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › USH1C_N | 0.52 | 39.0 | 4.18e-01 | 87.1% | 90.7% |