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KC960489.1__AHB79288.1__MaF1660_ph0094__00093
Bact-VirKC960489.1__AHB79288.1__MaF1660_ph0094__00093
Identity
- Accession:
- KC960489 ↗
- Kingdom:
- phage
Quality
83.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-126
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.79 | 37.0 | 4.48e-01 | 80.4% | 67.7% |
| 3cyjA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.61 | 46.0 | 4.25e-01 | 81.5% | 86.9% |
| 1n7vA02 | 2.60.330.10 | Mainly Beta › Sandwich › receptor-binding protein prd1-p2, domain 2 › receptor-binding protein prd1-p2, domain 2 | 0.61 | 45.0 | 4.12e-01 | 78.3% | 77.2% |
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.61 | 48.0 | 3.95e-01 | 85.9% | 52.9% |
| 2chrA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.60 | 45.0 | 4.10e-01 | 80.4% | 82.7% |
| 3ijlA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.60 | 45.0 | 4.30e-01 | 81.5% | 94.4% |
| 4c92C00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 39.0 | 4.22e-01 | 73.9% | 78.5% |
| 4l9cA00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.59 | 47.0 | 4.02e-01 | 87.0% | 75.3% |
| 6xrbA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.57 | 46.0 | 4.02e-01 | 88.0% | 61.2% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 52.0 | 4.45e-01 | 100.0% | 65.5% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 50.0 | 4.72e-01 | 100.0% | 82.6% |
| 4dm5A00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.56 | 37.0 | 3.81e-01 | 85.9% | 71.3% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.56 | 46.0 | 4.02e-01 | 90.2% | 84.3% |
| 1m2xA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.56 | 42.0 | 3.15e-01 | 79.3% | 90.4% |
| 4g79A00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.56 | 46.0 | 4.11e-01 | 92.4% | 100.0% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.55 | 43.0 | 3.70e-01 | 84.8% | 59.6% |
| 2xrnA02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.55 | 42.0 | 3.48e-01 | 83.7% | 59.9% |
| 2joxA00 | 2.60.40.4240 | Mainly Beta › Sandwich › Immunoglobulin-like › Transcription activator, Churchill | 0.54 | 43.0 | 4.11e-01 | 95.7% | 73.6% |
| 1ohfA03 | 2.60.270.70 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › | 0.54 | 41.0 | 3.53e-01 | 80.4% | 72.3% |
| 1lhpA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 47.0 | 3.29e-01 | 98.9% | 51.3% |
| 3nqnA00 | 3.30.530.70 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › Uncharacterised protein PF12723, DUF3809 | 0.53 | 38.0 | 3.26e-01 | 100.0% | 45.0% |
| 1aqbA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 44.0 | 3.61e-01 | 100.0% | 48.6% |
| 3ci0J01 | 3.10.610.10 | Alpha Beta › Roll › Pili subunits › GSPII I/J protein-like | 0.52 | 44.0 | 4.31e-01 | 96.7% | 83.7% |
| 4bboA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.50 | 43.0 | 4.09e-01 | 100.0% | 77.9% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3807906 | 331.3.1.43 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C | 0.64 | 51.0 | 3.92e-01 | 85.9% | 90.7% |
| 3526118 | 11.1.1.810 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FGF-BP1 | 0.61 | 49.0 | 4.74e-01 | 87.0% | 98.1% |
| 4346250 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.61 | 56.0 | 4.83e-01 | 98.9% | 77.9% |
| 167858 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.61 | 46.0 | 4.22e-01 | 81.5% | 84.8% |
| 4297163 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.61 | 46.0 | 4.44e-01 | 81.5% | 99.0% |
| 3188398 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.60 | 55.0 | 4.14e-01 | 98.9% | 72.9% |
| 3832583 | 331.3.1.43 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C | 0.59 | 51.0 | 3.81e-01 | 96.7% | 39.1% |
| 3376518 | 331.3.1.43 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C | 0.58 | 51.0 | 3.73e-01 | 96.7% | 37.6% |
| 3428522 | 331.3.1.43 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C | 0.58 | 51.0 | 3.74e-01 | 96.7% | 45.8% |
| 3927283 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.58 | 41.0 | 3.51e-01 | 96.7% | 45.3% |
| 3303879 | 331.3.1.43 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C | 0.57 | 50.0 | 3.73e-01 | 96.7% | 37.9% |
| 4153442 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.57 | 50.0 | 4.58e-01 | 94.6% | 79.2% |
| 3266842 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.57 | 41.0 | 3.76e-01 | 76.1% | 92.0% |
| 4018089 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.57 | 50.0 | 4.56e-01 | 94.6% | 80.0% |
| 4354418 | 9.1.1.16 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.56 | 52.0 | 3.04e-01 | 100.0% | 21.9% |
| 3378914 | 331.3.1.43 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C | 0.56 | 49.0 | 3.61e-01 | 96.7% | 37.9% |
| 3654131 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.55 | 48.0 | 4.03e-01 | 96.7% | 65.0% |
| 4947620 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.55 | 49.0 | 3.67e-01 | 96.7% | 94.0% |
| 4973410 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.55 | 43.0 | 3.63e-01 | 85.9% | 55.6% |
| 4800489 | 5.1.13.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › Propeller domain of DCAF15 › DCAF15_WD40 | 0.54 | 46.0 | 3.66e-01 | 97.8% | 76.0% |
| 165299 | 375.1.1.34 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Churchill | 0.54 | 43.0 | 4.11e-01 | 95.7% | 73.6% |
| 3608162 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.54 | 48.0 | 3.96e-01 | 98.9% | 69.7% |
| 5083024 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 42.0 | 2.74e-01 | 92.4% | 18.4% |
| 3406726 | 5087.3.1.0 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C | 0.51 | 41.0 | 2.91e-01 | 88.0% | 34.2% |
| 3480143 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.51 | 44.0 | 3.78e-01 | 97.8% | 67.3% |