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KC960489.1__AHB79308.1__MaF1660_ph0114__00113
Bact-VirKC960489.1__AHB79308.1__MaF1660_ph0114__00113
Identity
- Accession:
- KC960489 ↗
- Kingdom:
- phage
Quality
91.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-89
Domain cluster:
rep: DGJ7_scaffold_2_2069_prodigal-single.1__X__X__00208__D582-656
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qvwD02 | 2.170.260.10 | Mainly Beta › Beta Complex › paz domain › paz domain | 0.76 | 53.0 | 4.81e-01 | 72.3% | 99.1% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 49.0 | 5.36e-01 | 73.5% | 84.1% |
| 1vx7N01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 48.0 | 4.77e-01 | 72.3% | 67.1% |
| 2db9A01 | 3.90.70.200 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Plus-3 domain | 0.71 | 49.0 | 4.16e-01 | 71.1% | 60.9% |
| 1h3zA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 47.0 | 4.32e-01 | 71.1% | 64.8% |
| 3pieC05 | 2.170.260.40 | Mainly Beta › Beta Complex › paz domain › | 0.67 | 49.0 | 3.90e-01 | 77.1% | 92.8% |
| 1vq8T00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 47.0 | 4.16e-01 | 72.3% | 66.4% |
| 2e6nA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 45.0 | 4.21e-01 | 71.1% | 56.7% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 44.0 | 4.15e-01 | 71.1% | 57.0% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 45.0 | 4.75e-01 | 72.3% | 80.8% |
| 3ceyB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 50.0 | 4.17e-01 | 80.7% | 75.9% |
| 4n4iA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 43.0 | 4.22e-01 | 73.5% | 63.3% |
| 2vgeA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.63 | 50.0 | 3.75e-01 | 85.5% | 50.2% |
| 3hrsA02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.63 | 43.0 | 4.49e-01 | 71.1% | 96.1% |
| 3h6zA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 49.0 | 4.47e-01 | 84.3% | 98.2% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 40.0 | 4.14e-01 | 71.1% | 70.0% |
| 3pfsB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 49.0 | 4.21e-01 | 85.5% | 76.9% |
| 3dclA02 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.60 | 41.0 | 4.05e-01 | 72.3% | 93.4% |
| 2cs7A00 | 3.10.50.90 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.55 | 31.0 | 3.56e-01 | 75.9% | 80.0% |
| 1a7sA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 41.0 | 3.72e-01 | 79.5% | 67.9% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 40.0 | 3.58e-01 | 80.7% | 81.5% |
| 2psbA00 | 3.50.90.10 | Alpha Beta › 3-Layer(bba) Sandwich › YerB-like fold › YerB-like | 0.52 | 40.0 | 2.81e-01 | 84.3% | 85.5% |
| 1qfjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 35.0 | 3.46e-01 | 71.1% | 95.6% |
| 4chmB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 38.0 | 3.41e-01 | 80.7% | 87.1% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4665407 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.82 | 49.0 | 6.18e-01 | 71.1% | 100.0% |
| 4680376 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.81 | 49.0 | 5.96e-01 | 71.1% | 92.7% |
| 3675341 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.81 | 50.0 | 6.04e-01 | 71.1% | 94.5% |
| 3436022 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.79 | 49.0 | 5.89e-01 | 71.1% | 94.5% |
| 4218142 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.74 | 49.0 | 4.57e-01 | 71.1% | 56.0% |
| 3463181 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 49.0 | 5.25e-01 | 71.1% | 82.9% |
| 3886646 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.70 | 48.0 | 5.37e-01 | 71.1% | 100.0% |
| 4627221 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.70 | 47.0 | 5.25e-01 | 72.3% | 89.2% |
| 3532801 | 4.1.1.167 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1,p47_phox_C,NCF1_PBR_AIR | 0.69 | 49.0 | 4.05e-01 | 74.7% | 47.6% |
| 3615113 | 4.18.1.1 ↗ | beta barrels › SH3 › Plus3 › Plus3 › Plus-3 | 0.68 | 49.0 | 4.02e-01 | 75.9% | 87.7% |
| 3274551 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.67 | 46.0 | 4.80e-01 | 71.1% | 77.3% |
| 3700174 | 4.18.1.0 ↗ | beta barrels › SH3 › Plus3 › Plus3 | 0.67 | 47.0 | 4.06e-01 | 72.3% | 79.2% |
| 3523592 | 4.1.1.2 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1,NCF1_PBR_AIR | 0.66 | 49.0 | 4.26e-01 | 78.3% | 57.6% |
| 3554994 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.65 | 47.0 | 4.65e-01 | 77.1% | 87.6% |
| 3748846 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.64 | 47.0 | 5.18e-01 | 75.9% | 98.5% |
| 3713629 | 4.1.1.315 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 | 0.61 | 55.0 | 3.48e-01 | 100.0% | 59.8% |
| 3903213 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 43.0 | 3.41e-01 | 75.9% | 40.0% |
| 3829807 | 4.18.1.1 ↗ | beta barrels › SH3 › Plus3 › Plus3 › Plus-3 | 0.59 | 46.0 | 3.87e-01 | 81.9% | 59.3% |
| 5029770 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 45.0 | 4.16e-01 | 90.4% | 86.7% |
D2
high
residues 93-267
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v72A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 27.0 | 3.36e-01 | 72.6% | 75.2% |
| 3b59A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 30.0 | 3.42e-01 | 98.9% | 76.9% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4945791 | 2.1.1.287 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Zn_ribbon_TiaS | 0.53 | 32.0 | 3.79e-01 | 84.6% | 87.5% |
| 5045714 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.52 | 38.0 | 3.76e-01 | 74.3% | 98.4% |
| 4420993 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 32.0 | 3.83e-01 | 78.9% | 95.7% |