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KF005317.1__AGM46827.1__AD45P1_00045__00009

Bact-Vir

KF005317.1__AGM46827.1__AD45P1_00045__00009

Identity

Accession:
KF005317 ↗
Kingdom:
phage

Quality

70.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Alteromonas_phage_vB_AmaP_AD45-P1

TaxID: 1300004

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-75
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2or0B02 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.53 35.0 3.13e-01 97.1% 47.5%
3vvvA00 2.60.40.2840 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 29.0 2.53e-01 82.6% 31.5%
3gw6A03 3.30.2460.10 Alpha Beta › 2-Layer Sandwich › Endo-n-acetylneuraminidase fold › Endo-n-acetylneuraminidase domain 0.51 31.0 3.29e-01 76.8% 70.2%
1kcvL02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 32.0 2.90e-01 84.1% 41.7%
2ztbA02 2.60.40.4280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 34.0 3.04e-01 71.0% 87.9%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4873245 2485.3.1.2 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 0.67 50.0 4.13e-01 94.2% 43.8%
4944707 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.64 45.0 3.64e-01 89.9% 37.7%
5044753 11.1.5.59 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF4139 0.60 46.0 3.74e-01 82.6% 48.5%
3808513 76.1.1.2 ↗ beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Jacalin 0.56 37.0 3.13e-01 73.9% 38.4%
5055242 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 29.0 2.75e-01 82.6% 41.2%
4965185 7099.1.1.1 ↗ a+b complex topology › VP5 N-terminal domain › VP5 N-terminal domain › VP5 N-terminal domain › Viral_env_HRPV 0.50 35.0 2.34e-01 75.4% 34.8%